RNA–Protein interactions for RNA: ENST00000473212.1

COL18A1-207, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 2

Gene COL18A1, Length 2,515 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-207ENST00000473212 MORN2Q502X0 79 aa17.44■□□□□ 0.38
COL18A1-207ENST00000473212 OR10G8Q8NGN5 311 aa17.44■□□□□ 0.38
COL18A1-207ENST00000473212 DUSP13Q9UII6 198 aa17.44■□□□□ 0.38
COL18A1-207ENST00000473212 NAGKQ9UJ70 344 aa17.44■□□□□ 0.38
COL18A1-207ENST00000473212 ATG101Q9BSB4 218 aa17.44■□□□□ 0.38
COL18A1-207ENST00000473212 ARFGEF3Q5TH69 2177 aa17.43■□□□□ 0.38
COL18A1-207ENST00000473212 IGHV1-18A0A0C4DH31 117 aa17.43■□□□□ 0.38
COL18A1-207ENST00000473212 TCAPO15273 167 aa17.43■□□□□ 0.38
COL18A1-207ENST00000473212 NUTF2P61970 127 aaKnown RBP17.43■□□□□ 0.38
COL18A1-207ENST00000473212 RELBQ01201 579 aa17.43■□□□□ 0.38
COL18A1-207ENST00000473212 C1orf159Q96HA4 380 aa17.43■□□□□ 0.38
COL18A1-207ENST00000473212 IGHV2OR16-5A0A0B4J2B6 119 aa17.43■□□□□ 0.38
COL18A1-207ENST00000473212 ERVK-16P61578 105 aa17.43■□□□□ 0.38
COL18A1-207ENST00000473212 SPATA31B1PQ5VZV4 182 aa17.43■□□□□ 0.38
COL18A1-207ENST00000473212 TXNDC17Q9BRA2 123 aa17.43■□□□□ 0.38
COL18A1-207ENST00000473212 SNHG12Q9BXW3 62 aa17.43■□□□□ 0.38
COL18A1-207ENST00000473212 FAM90A9PA6NNJ1 464 aa17.42■□□□□ 0.38
COL18A1-207ENST00000473212 MYOD1P15172 320 aa17.42■□□□□ 0.38
COL18A1-207ENST00000473212 CD33P20138 364 aa17.42■□□□□ 0.38
COL18A1-207ENST00000473212 ERVFC1-1P60608 527 aa17.42■□□□□ 0.38
COL18A1-207ENST00000473212 SLC17A3O00476 420 aa17.42■□□□□ 0.38
COL18A1-207ENST00000473212 CBLN1P23435 193 aa17.42■□□□□ 0.38
COL18A1-207ENST00000473212 YPEL3P61236 119 aaPredicted RBP17.42■□□□□ 0.38
COL18A1-207ENST00000473212 HLA-DRB5Q30154 266 aa17.42■□□□□ 0.38
COL18A1-207ENST00000473212 ZNF718Q3SXZ3 478 aa17.42■□□□□ 0.38
COL18A1-207ENST00000473212 C1orf194Q5T5A4 169 aa17.42■□□□□ 0.38
COL18A1-207ENST00000473212 TRAT1Q6PIZ9 186 aa17.42■□□□□ 0.38
COL18A1-207ENST00000473212 DUX4L9Q6RFH8 374 aaPredicted RBP17.42■□□□□ 0.38
COL18A1-207ENST00000473212 OR52E5Q8NH55 327 aa17.42■□□□□ 0.38
COL18A1-207ENST00000473212 SEPSECSQ9HD40 501 aaKnown RBP17.42■□□□□ 0.38
COL18A1-207ENST00000473212 TMEM140Q9NV12 185 aa17.42■□□□□ 0.38
COL18A1-207ENST00000473212 ZNF705FA8MVS1 300 aaPredicted RBP17.41■□□□□ 0.38
COL18A1-207ENST00000473212 ZNF705DP0CH99 300 aaPredicted RBP17.41■□□□□ 0.38
COL18A1-207ENST00000473212 ZNF705BP0CI00 300 aaPredicted RBP17.41■□□□□ 0.38
COL18A1-207ENST00000473212 TMPRSS3P57727 454 aa17.41■□□□□ 0.38
COL18A1-207ENST00000473212 RPL31P62899 125 aaKnown RBP17.41■□□□□ 0.38
COL18A1-207ENST00000473212 ZNF90Q03938 601 aa17.41■□□□□ 0.38
COL18A1-207ENST00000473212 CMTM2Q8TAZ6 248 aa17.41■□□□□ 0.38
COL18A1-207ENST00000473212 TCF19Q9Y242 345 aa17.41■□□□□ 0.38
COL18A1-207ENST00000473212 ADGRG4Q8IZF6 3080 aa17.41■□□□□ 0.38
COL18A1-207ENST00000473212 K7EN84 100 aa17.41■□□□□ 0.38
COL18A1-207ENST00000473212 IL6RP08887 468 aaPredicted RBP17.41■□□□□ 0.38
COL18A1-207ENST00000473212 GCHFRP30047 84 aa17.41■□□□□ 0.38
COL18A1-207ENST00000473212 FAM90A1Q86YD7 464 aa17.41■□□□□ 0.38
COL18A1-207ENST00000473212 FOXH1O75593 365 aa17.4■□□□□ 0.38
COL18A1-207ENST00000473212 IGHG3P01860 377 aa17.4■□□□□ 0.38
COL18A1-207ENST00000473212 OR10J1P30954 320 aa17.4■□□□□ 0.38
COL18A1-207ENST00000473212 S1PR3Q99500 378 aa17.4■□□□□ 0.38
COL18A1-207ENST00000473212 NEU1Q99519 415 aa17.4■□□□□ 0.38
COL18A1-207ENST00000473212 NPVFQ9HCQ7 196 aa17.4■□□□□ 0.38
COL18A1-207ENST00000473212 TP53TG3Q9ULZ0 132 aa17.4■□□□□ 0.38
COL18A1-207ENST00000473212 EFNB3Q15768 340 aa17.4■□□□□ 0.38
COL18A1-207ENST00000473212 ARSJQ5FYB0 599 aaPredicted RBP17.4■□□□□ 0.38
COL18A1-207ENST00000473212 TBX15Q96SF7 602 aa17.4■□□□□ 0.38
COL18A1-207ENST00000473212 JPT1Q9UK76 154 aa17.4■□□□□ 0.38
COL18A1-207ENST00000473212 LSM4Q9Y4Z0 139 aaKnown RBP17.4■□□□□ 0.38
COL18A1-207ENST00000473212 VHLLQ6RSH7 139 aa17.39■□□□□ 0.37
COL18A1-207ENST00000473212 YLPM1P49750 1951 aaKnown RBP17.39■□□□□ 0.37
COL18A1-207ENST00000473212 KIR2DL5BA0A0G2JN68 375 aa17.39■□□□□ 0.37
COL18A1-207ENST00000473212 KIR2DL5BA0A0G2JPC4 375 aa17.39■□□□□ 0.37
COL18A1-207ENST00000473212 KIR2DL5AQ8N109 375 aa17.39■□□□□ 0.37
COL18A1-207ENST00000473212 GCSAMQ8N6F7 178 aa17.39■□□□□ 0.37
COL18A1-207ENST00000473212 STPG3Q8N7X2 389 aa17.39■□□□□ 0.37
COL18A1-207ENST00000473212 IFI27L2Q9H2X8 130 aa17.39■□□□□ 0.37
COL18A1-207ENST00000473212 M0R296 226 aa17.38■□□□□ 0.37
COL18A1-207ENST00000473212 YPEL1O60688 119 aa17.38■□□□□ 0.37
COL18A1-207ENST00000473212 LOXL3P58215 753 aa17.38■□□□□ 0.37
COL18A1-207ENST00000473212 ZNF124Q15973 351 aa17.38■□□□□ 0.37
COL18A1-207ENST00000473212 ZCCHC14Q8WYQ9 949 aaKnown RBP17.38■□□□□ 0.37
COL18A1-207ENST00000473212 YPEL2Q96QA6 119 aa17.38■□□□□ 0.37
COL18A1-207ENST00000473212 IL36BQ9NZH7 164 aa17.38■□□□□ 0.37
COL18A1-207ENST00000473212 ATMQ13315 3056 aa17.38■□□□□ 0.37
COL18A1-207ENST00000473212 MRPL18Q9H0U6 180 aaKnown RBP17.38■□□□□ 0.37
COL18A1-207ENST00000473212 TNFSF13O75888 250 aa17.37■□□□□ 0.37
COL18A1-207ENST00000473212 ZNF83P51522 516 aa17.37■□□□□ 0.37
COL18A1-207ENST00000473212 LINC00310P59036 64 aa17.37■□□□□ 0.37
COL18A1-207ENST00000473212 TEPPQ6URK8 271 aa17.37■□□□□ 0.37
COL18A1-207ENST00000473212 FAM122AQ96E09 287 aa17.37■□□□□ 0.37
COL18A1-207ENST00000473212 DKK4Q9UBT3 224 aa17.37■□□□□ 0.37
COL18A1-207ENST00000473212 M0R143 59 aa17.37■□□□□ 0.37
COL18A1-207ENST00000473212 FRMD6-AS1P0C7T7 363 aa17.37■□□□□ 0.37
COL18A1-207ENST00000473212 FOSL1P15407 271 aa17.37■□□□□ 0.37
COL18A1-207ENST00000473212 SELENOTP62341 195 aa17.37■□□□□ 0.37
COL18A1-207ENST00000473212 RHOBP62745 196 aa17.37■□□□□ 0.37
COL18A1-207ENST00000473212 Q6ZWC4 215 aa17.37■□□□□ 0.37
COL18A1-207ENST00000473212 MOGAT3Q86VF5 341 aa17.37■□□□□ 0.37
COL18A1-207ENST00000473212 OR4P4Q8NGL7 312 aa17.37■□□□□ 0.37
COL18A1-207ENST00000473212 TMEM106BQ9NUM4 274 aa17.37■□□□□ 0.37
COL18A1-207ENST00000473212 IGLV1-44P01699 117 aa17.36■□□□□ 0.37
COL18A1-207ENST00000473212 RPRMLQ8N4K4 120 aa17.36■□□□□ 0.37
COL18A1-207ENST00000473212 CHODLQ9H9P2 273 aa17.36■□□□□ 0.37
COL18A1-207ENST00000473212 ZNRD1Q9P1U0 126 aa17.36■□□□□ 0.37
COL18A1-207ENST00000473212 KALRNO60229 2985 aa17.36■□□□□ 0.37
COL18A1-207ENST00000473212 SRRM5B3KS81 715 aa17.36■□□□□ 0.37
COL18A1-207ENST00000473212 CRISP2P16562 243 aa17.36■□□□□ 0.37
COL18A1-207ENST00000473212 TOMM20LQ6UXN7 152 aa17.36■□□□□ 0.37
COL18A1-207ENST00000473212 STARD4Q96DR4 205 aa17.36■□□□□ 0.37
COL18A1-207ENST00000473212 OR2V2Q96R30 315 aa17.36■□□□□ 0.37
COL18A1-207ENST00000473212 GVINP1Q7Z2Y8 2422 aa17.35■□□□□ 0.37
COL18A1-207ENST00000473212 MGST3O14880 152 aa17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms