RNA–Protein interactions for RNA: ENST00000472490.1

BRCA1-211, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 3

Gene BRCA1, Length 561 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-211ENST00000472490 UPK2O00526 184 aa11.07□□□□□ -0.64
BRCA1-211ENST00000472490 DHFRP00374 187 aa11.07□□□□□ -0.64
BRCA1-211ENST00000472490 TRGV3P03979 118 aa11.07□□□□□ -0.64
BRCA1-211ENST00000472490 OR9G9P0C7N8 305 aa11.07□□□□□ -0.64
BRCA1-211ENST00000472490 CD33P20138 364 aa11.07□□□□□ -0.64
BRCA1-211ENST00000472490 G6PCP35575 357 aa11.07□□□□□ -0.64
BRCA1-211ENST00000472490 ZNF57Q68EA5 555 aaPredicted RBP11.07□□□□□ -0.64
BRCA1-211ENST00000472490 THOC7Q6I9Y2 204 aaKnown RBP11.07□□□□□ -0.64
BRCA1-211ENST00000472490 SRSF8Q9BRL6 282 aaKnown RBP11.07□□□□□ -0.64
BRCA1-211ENST00000472490 COA4Q9NYJ1 87 aa11.07□□□□□ -0.64
BRCA1-211ENST00000472490 GPR132Q9UNW8 380 aa11.07□□□□□ -0.64
BRCA1-211ENST00000472490 DUS4LO95620 317 aaKnown RBP11.06□□□□□ -0.64
BRCA1-211ENST00000472490 IL6RP08887 468 aaPredicted RBP11.06□□□□□ -0.64
BRCA1-211ENST00000472490 RUNX1Q01196 453 aa11.06□□□□□ -0.64
BRCA1-211ENST00000472490 TRIM16LQ309B1 348 aa11.06□□□□□ -0.64
BRCA1-211ENST00000472490 H2BFWTQ7Z2G1 175 aa11.06□□□□□ -0.64
BRCA1-211ENST00000472490 HSD17B13Q7Z5P4 300 aaPredicted RBP11.06□□□□□ -0.64
BRCA1-211ENST00000472490 TTC9CQ8N5M4 171 aa11.06□□□□□ -0.64
BRCA1-211ENST00000472490 MRGPRFQ96AM1 343 aa11.06□□□□□ -0.64
BRCA1-211ENST00000472490 MS4A10Q96PG2 267 aa11.06□□□□□ -0.64
BRCA1-211ENST00000472490 FYTTD1Q96QD9 318 aaKnown RBP11.06□□□□□ -0.64
BRCA1-211ENST00000472490 PRNDQ9UKY0 176 aa11.06□□□□□ -0.64
BRCA1-211ENST00000472490 KCNIP3Q9Y2W7 256 aa11.06□□□□□ -0.64
BRCA1-211ENST00000472490 PIGBOS1A0A0B4J2F0 54 aa11.05□□□□□ -0.64
BRCA1-211ENST00000472490 C13orf42A0A1B0GVH6 325 aa11.05□□□□□ -0.64
BRCA1-211ENST00000472490 CENPXA8MT69 81 aa11.05□□□□□ -0.64
BRCA1-211ENST00000472490 APELAP0DMC3 54 aa11.05□□□□□ -0.64
BRCA1-211ENST00000472490 KIAA0141Q14154 515 aaPredicted RBP11.05□□□□□ -0.64
BRCA1-211ENST00000472490 C10orf55Q5SWW7 151 aa11.05□□□□□ -0.64
BRCA1-211ENST00000472490 ASPHD1Q5U4P2 390 aa11.05□□□□□ -0.64
BRCA1-211ENST00000472490 C18orf65Q6ZTR6 163 aa11.05□□□□□ -0.64
BRCA1-211ENST00000472490 SGPP2Q8IWX5 399 aa11.05□□□□□ -0.64
BRCA1-211ENST00000472490 ADAD2Q8NCV1 583 aaKnown RBP11.05□□□□□ -0.64
BRCA1-211ENST00000472490 WFDC9Q8NEX5 89 aa11.05□□□□□ -0.64
BRCA1-211ENST00000472490 DPF1Q92782 380 aa11.05□□□□□ -0.64
BRCA1-211ENST00000472490 USMG5Q96IX5 58 aa11.05□□□□□ -0.64
BRCA1-211ENST00000472490 TP53RKQ96S44 253 aa11.05□□□□□ -0.64
BRCA1-211ENST00000472490 SLC25A21Q9BQT8 299 aaPredicted RBP11.05□□□□□ -0.64
BRCA1-211ENST00000472490 RTBDNQ9BSG5 229 aaPredicted RBP11.05□□□□□ -0.64
BRCA1-211ENST00000472490 QTRT1Q9BXR0 403 aaKnown RBP11.05□□□□□ -0.64
BRCA1-211ENST00000472490 C5orf66Q9H5L9 145 aa11.05□□□□□ -0.64
BRCA1-211ENST00000472490 ZNF257Q9Y2Q1 563 aa11.05□□□□□ -0.64
BRCA1-211ENST00000472490 NAP1L6A6NFF2 107 aa11.04□□□□□ -0.64
BRCA1-211ENST00000472490 NPIPB5A8MRT5 1133 aa11.04□□□□□ -0.64
BRCA1-211ENST00000472490 TEX22C9J3V5 150 aa11.04□□□□□ -0.64
BRCA1-211ENST00000472490 CYB5BO43169 146 aa11.04□□□□□ -0.64
BRCA1-211ENST00000472490 LGALS1P09382 135 aaKnown RBP11.04□□□□□ -0.64
BRCA1-211ENST00000472490 OR8U8P0C7N1 319 aa11.04□□□□□ -0.64
BRCA1-211ENST00000472490 UCP1P25874 307 aa11.04□□□□□ -0.64
BRCA1-211ENST00000472490 AKR1C2P52895 323 aa11.04□□□□□ -0.64
BRCA1-211ENST00000472490 DHODHQ02127 395 aa11.04□□□□□ -0.64
BRCA1-211ENST00000472490 CNPY1Q3B7I2 92 aa11.04□□□□□ -0.64
BRCA1-211ENST00000472490 MRPL41Q8IXM3 137 aaKnown RBP11.04□□□□□ -0.64
BRCA1-211ENST00000472490 OR11H1Q8NG94 326 aa11.04□□□□□ -0.64
BRCA1-211ENST00000472490 OR1L8Q8NGR8 309 aa11.04□□□□□ -0.64
BRCA1-211ENST00000472490 OR5B3Q8NH48 314 aa11.04□□□□□ -0.64
BRCA1-211ENST00000472490 OR4A16Q8NH70 328 aa11.04□□□□□ -0.64
BRCA1-211ENST00000472490 CASTOR1Q8WTX7 329 aa11.04□□□□□ -0.64
BRCA1-211ENST00000472490 S100ZQ8WXG8 99 aa11.04□□□□□ -0.64
BRCA1-211ENST00000472490 RRNAD1Q96FB5 475 aaKnown RBP11.04□□□□□ -0.64
BRCA1-211ENST00000472490 RCC1LQ96I51 464 aaKnown RBP11.04□□□□□ -0.64
BRCA1-211ENST00000472490 RAX2Q96IS3 184 aa11.04□□□□□ -0.64
BRCA1-211ENST00000472490 SEC22AQ96IW7 307 aa11.04□□□□□ -0.64
BRCA1-211ENST00000472490 P2RX4Q99571 388 aa11.04□□□□□ -0.64
BRCA1-211ENST00000472490 MCRIP2Q9BUT9 160 aaKnown RBP11.04□□□□□ -0.64
BRCA1-211ENST00000472490 GPR61Q9BZJ8 451 aa11.04□□□□□ -0.64
BRCA1-211ENST00000472490 NAA60Q9H7X0 242 aa11.04□□□□□ -0.64
BRCA1-211ENST00000472490 TRAV3A0A0B4J244 114 aa11.03□□□□□ -0.64
BRCA1-211ENST00000472490 HMX3A6NHT5 357 aa11.03□□□□□ -0.64
BRCA1-211ENST00000472490 CRYM-AS1A6NIL9 109 aa11.03□□□□□ -0.64
BRCA1-211ENST00000472490 FAM223BA6NKX1 122 aa11.03□□□□□ -0.64
BRCA1-211ENST00000472490 I3L521 148 aa11.03□□□□□ -0.64
BRCA1-211ENST00000472490 RBMXL2O75526 392 aaKnown RBP11.03□□□□□ -0.64
BRCA1-211ENST00000472490 TRAPPC2P0DI81 140 aa11.03□□□□□ -0.64
BRCA1-211ENST00000472490 TRAPPC2BP0DI82 140 aa11.03□□□□□ -0.64
BRCA1-211ENST00000472490 ANXA3P12429 323 aa11.03□□□□□ -0.64
BRCA1-211ENST00000472490 DEFA4P12838 97 aa11.03□□□□□ -0.64
BRCA1-211ENST00000472490 OR2B8PP59922 312 aa11.03□□□□□ -0.64
BRCA1-211ENST00000472490 ZNF616Q08AN1 781 aa11.03□□□□□ -0.64
BRCA1-211ENST00000472490 BAK1Q16611 211 aa11.03□□□□□ -0.64
BRCA1-211ENST00000472490 SP6Q3SY56 376 aa11.03□□□□□ -0.64
BRCA1-211ENST00000472490 FAM209BQ5JX69 171 aa11.03□□□□□ -0.64
BRCA1-211ENST00000472490 FAM223AQ8IWN6 122 aa11.03□□□□□ -0.64
BRCA1-211ENST00000472490 LINC00482Q8N8I6 264 aa11.03□□□□□ -0.64
BRCA1-211ENST00000472490 NECAP1Q8NC96 275 aa11.03□□□□□ -0.64
BRCA1-211ENST00000472490 OR1N2Q8NGR9 330 aa11.03□□□□□ -0.64
BRCA1-211ENST00000472490 RNASE11Q8TAA1 199 aaKnown RBP11.03□□□□□ -0.64
BRCA1-211ENST00000472490 TMEM56Q96MV1 263 aa11.03□□□□□ -0.64
BRCA1-211ENST00000472490 OR5B12Q96R08 314 aa11.03□□□□□ -0.64
BRCA1-211ENST00000472490 C7orf50Q9BRJ6 194 aaKnown RBP11.03□□□□□ -0.64
BRCA1-211ENST00000472490 TMEM222Q9H0R3 208 aa11.03□□□□□ -0.64
BRCA1-211ENST00000472490 GNB4Q9HAV0 340 aa11.03□□□□□ -0.64
BRCA1-211ENST00000472490 OR51B2Q9Y5P1 312 aa11.03□□□□□ -0.64
BRCA1-211ENST00000472490 C15orf61A6NNL5 157 aa11.02□□□□□ -0.65
BRCA1-211ENST00000472490 CDS2O95674 445 aa11.02□□□□□ -0.65
BRCA1-211ENST00000472490 IGKV1-39P01597 117 aa11.02□□□□□ -0.65
BRCA1-211ENST00000472490 IGKV1D-39P04432 117 aa11.02□□□□□ -0.65
BRCA1-211ENST00000472490 HSPB1P04792 205 aaKnown RBP11.02□□□□□ -0.65
BRCA1-211ENST00000472490 CRYGCP07315 174 aa11.02□□□□□ -0.65
BRCA1-211ENST00000472490 OR5AC1P0C628 307 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms