RNA–Protein interactions for RNA: ENST00000472155.5

UBXN11-213, Transcript of UBX domain protein 11, humanhuman

TSL 1 (best)

Gene UBXN11, Length 2,646 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN11-213ENST00000472155 CDSNQ15517 529 aa12.28□□□□□ -0.44
UBXN11-213ENST00000472155 SLC25A48Q6ZT89 311 aaKnown RBP12.28□□□□□ -0.44
UBXN11-213ENST00000472155 H1FXQ92522 213 aaKnown RBP12.28□□□□□ -0.44
UBXN11-213ENST00000472155 C12orf57Q99622 126 aa12.28□□□□□ -0.44
UBXN11-213ENST00000472155 SDF2L1Q9HCN8 221 aa12.28□□□□□ -0.44
UBXN11-213ENST00000472155 ARHGAP32A7KAX9 2087 aa12.28□□□□□ -0.44
UBXN11-213ENST00000472155 MLANAQ16655 118 aa12.28□□□□□ -0.44
UBXN11-213ENST00000472155 LINC01560Q8TB33 94 aa12.28□□□□□ -0.44
UBXN11-213ENST00000472155 ZNF729A6NN14 1252 aaPredicted RBP12.27□□□□□ -0.44
UBXN11-213ENST00000472155 TMEM178BH3BS89 294 aa12.27□□□□□ -0.44
UBXN11-213ENST00000472155 CA2P00918 260 aa12.27□□□□□ -0.44
UBXN11-213ENST00000472155 FABP9Q0Z7S8 132 aa12.27□□□□□ -0.44
UBXN11-213ENST00000472155 OR4F5Q8NH21 305 aa12.27□□□□□ -0.44
UBXN11-213ENST00000472155 OR4F4Q96R69 305 aa12.27□□□□□ -0.44
UBXN11-213ENST00000472155 MRPL20Q9BYC9 149 aaKnown RBP12.27□□□□□ -0.44
UBXN11-213ENST00000472155 TMEM14BQ9NUH8 114 aa12.27□□□□□ -0.44
UBXN11-213ENST00000472155 AURKAIP1Q9NWT8 199 aaPredicted RBP12.27□□□□□ -0.44
UBXN11-213ENST00000472155 MED13LQ71F56 2210 aa12.27□□□□□ -0.44
UBXN11-213ENST00000472155 TRGV8A0A0C4DH27 118 aa12.27□□□□□ -0.45
UBXN11-213ENST00000472155 SPATA31B1PQ5VZV4 182 aa12.27□□□□□ -0.45
UBXN11-213ENST00000472155 OR13D1Q8NGV5 346 aa12.27□□□□□ -0.45
UBXN11-213ENST00000472155 RNASE6Q93091 150 aaKnown RBP12.27□□□□□ -0.45
UBXN11-213ENST00000472155 SMIM7Q9BQ49 75 aa12.27□□□□□ -0.45
UBXN11-213ENST00000472155 ACTR3CQ9C0K3 210 aaPredicted RBP12.27□□□□□ -0.45
UBXN11-213ENST00000472155 E7EUB6 86 aa12.26□□□□□ -0.45
UBXN11-213ENST00000472155 TNFRSF1AP19438 455 aa12.26□□□□□ -0.45
UBXN11-213ENST00000472155 CDC34P49427 236 aaPredicted RBP12.26□□□□□ -0.45
UBXN11-213ENST00000472155 THBS3P49746 956 aa12.26□□□□□ -0.45
UBXN11-213ENST00000472155 CLEC12BQ2HXU8 276 aa12.26□□□□□ -0.45
UBXN11-213ENST00000472155 NCMAPQ5T1S8 102 aa12.26□□□□□ -0.45
UBXN11-213ENST00000472155 OR10W1Q8NGF6 305 aa12.26□□□□□ -0.45
UBXN11-213ENST00000472155 CORO2AQ92828 525 aa12.26□□□□□ -0.45
UBXN11-213ENST00000472155 NCOR1P1Q9H4R4 102 aa12.26□□□□□ -0.45
UBXN11-213ENST00000472155 LINC00574Q9H8X3 128 aa12.26□□□□□ -0.45
UBXN11-213ENST00000472155 AKAP6Q13023 2319 aa12.26□□□□□ -0.45
UBXN11-213ENST00000472155 PPIAL4EA0A075B759 164 aa12.26□□□□□ -0.45
UBXN11-213ENST00000472155 A0A087WWC5 75 aa12.26□□□□□ -0.45
UBXN11-213ENST00000472155 PPIAL4DF5H284 164 aa12.26□□□□□ -0.45
UBXN11-213ENST00000472155 PPIAL4FP0DN26 164 aa12.26□□□□□ -0.45
UBXN11-213ENST00000472155 MAS1LP35410 378 aa12.26□□□□□ -0.45
UBXN11-213ENST00000472155 ATP5G3P48201 142 aa12.26□□□□□ -0.45
UBXN11-213ENST00000472155 ADIRFQ15847 76 aa12.26□□□□□ -0.45
UBXN11-213ENST00000472155 OR52E5Q8NH55 327 aa12.26□□□□□ -0.45
UBXN11-213ENST00000472155 DERL1Q9BUN8 251 aa12.26□□□□□ -0.45
UBXN11-213ENST00000472155 GGTLC1Q9BX51 225 aa12.26□□□□□ -0.45
UBXN11-213ENST00000472155 PARLQ9H300 379 aa12.26□□□□□ -0.45
UBXN11-213ENST00000472155 SLC35D1Q9NTN3 355 aa12.26□□□□□ -0.45
UBXN11-213ENST00000472155 TMEM106BQ9NUM4 274 aa12.26□□□□□ -0.45
UBXN11-213ENST00000472155 PPIAL4AQ9Y536 164 aa12.26□□□□□ -0.45
UBXN11-213ENST00000472155 LINC00312Q9Y6C7 94 aa12.26□□□□□ -0.45
UBXN11-213ENST00000472155 hADV38S2A0JD32 116 aa12.25□□□□□ -0.45
UBXN11-213ENST00000472155 FAM90A9PA6NNJ1 464 aa12.25□□□□□ -0.45
UBXN11-213ENST00000472155 ITGB1BP1O14713 200 aa12.25□□□□□ -0.45
UBXN11-213ENST00000472155 CYB5BO43169 146 aa12.25□□□□□ -0.45
UBXN11-213ENST00000472155 S100A6P06703 90 aa12.25□□□□□ -0.45
UBXN11-213ENST00000472155 NECAP1Q8NC96 275 aa12.25□□□□□ -0.45
UBXN11-213ENST00000472155 OR5T1Q8NG75 326 aa12.25□□□□□ -0.45
UBXN11-213ENST00000472155 GAB2Q9UQC2 676 aa12.25□□□□□ -0.45
UBXN11-213ENST00000472155 OR51B2Q9Y5P1 312 aa12.25□□□□□ -0.45
UBXN11-213ENST00000472155 VPS13CQ709C8 3753 aa12.25□□□□□ -0.45
UBXN11-213ENST00000472155 SAA1P0DJI8 122 aaPredicted RBP12.25□□□□□ -0.45
UBXN11-213ENST00000472155 HSPE1P61604 102 aaKnown RBP12.25□□□□□ -0.45
UBXN11-213ENST00000472155 PDLIM3Q53GG5 364 aaPredicted RBP12.25□□□□□ -0.45
UBXN11-213ENST00000472155 ABHD5Q8WTS1 349 aa12.25□□□□□ -0.45
UBXN11-213ENST00000472155 P2RX4Q99571 388 aa12.25□□□□□ -0.45
UBXN11-213ENST00000472155 RALYQ9UKM9 306 aaKnown RBP12.25□□□□□ -0.45
UBXN11-213ENST00000472155 FOXA2Q9Y261 457 aaPredicted RBP12.25□□□□□ -0.45
UBXN11-213ENST00000472155 RAXQ9Y2V3 346 aa12.25□□□□□ -0.45
UBXN11-213ENST00000472155 FAM90A27PA6NNH2 459 aa12.24□□□□□ -0.45
UBXN11-213ENST00000472155 DVL1O14640 695 aa12.24□□□□□ -0.45
UBXN11-213ENST00000472155 IGHV2-5P01817 119 aa12.24□□□□□ -0.45
UBXN11-213ENST00000472155 PSMB3P49720 205 aa12.24□□□□□ -0.45
UBXN11-213ENST00000472155 SLC16A13Q7RTY0 426 aa12.24□□□□□ -0.45
UBXN11-213ENST00000472155 SLC24A4Q8NFF2 622 aa12.24□□□□□ -0.45
UBXN11-213ENST00000472155 MALSU1Q96EH3 234 aa12.24□□□□□ -0.45
UBXN11-213ENST00000472155 PXMP4Q9Y6I8 212 aa12.24□□□□□ -0.45
UBXN11-213ENST00000472155 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.24□□□□□ -0.45
UBXN11-213ENST00000472155 PGPEP1LA6NFU8 196 aa12.24□□□□□ -0.45
UBXN11-213ENST00000472155 NKX6-3A6NJ46 265 aa12.24□□□□□ -0.45
UBXN11-213ENST00000472155 SIAH2O43255 324 aa12.24□□□□□ -0.45
UBXN11-213ENST00000472155 IFNA1P01562 189 aa12.24□□□□□ -0.45
UBXN11-213ENST00000472155 GATA2P23769 480 aaPredicted RBP12.24□□□□□ -0.45
UBXN11-213ENST00000472155 NPY1RP25929 384 aa12.24□□□□□ -0.45
UBXN11-213ENST00000472155 KIR2DS2P43631 304 aa12.24□□□□□ -0.45
UBXN11-213ENST00000472155 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.24□□□□□ -0.45
UBXN11-213ENST00000472155 RITA1Q96K30 269 aa12.24□□□□□ -0.45
UBXN11-213ENST00000472155 ELOVL1Q9BW60 279 aa12.24□□□□□ -0.45
UBXN11-213ENST00000472155 SEPSECSQ9HD40 501 aaKnown RBP12.24□□□□□ -0.45
UBXN11-213ENST00000472155 ZFHX3Q15911 3703 aa12.24□□□□□ -0.45
UBXN11-213ENST00000472155 C17orf112F2Z3M2 114 aa12.24□□□□□ -0.45
UBXN11-213ENST00000472155 TNFRSF13BO14836 293 aaPredicted RBP12.24□□□□□ -0.45
UBXN11-213ENST00000472155 MBP02144 154 aa12.24□□□□□ -0.45
UBXN11-213ENST00000472155 TRGC2P03986 189 aa12.24□□□□□ -0.45
UBXN11-213ENST00000472155 IGFBP2P18065 325 aa12.24□□□□□ -0.45
UBXN11-213ENST00000472155 CHRNB4P30926 498 aa12.24□□□□□ -0.45
UBXN11-213ENST00000472155 ACOT6Q3I5F7 207 aaPredicted RBP12.24□□□□□ -0.45
UBXN11-213ENST00000472155 ZNF714Q96N38 554 aa12.24□□□□□ -0.45
UBXN11-213ENST00000472155 DYNLRB1Q9NP97 96 aa12.24□□□□□ -0.45
UBXN11-213ENST00000472155 ZMAT5Q9UDW3 170 aaKnown RBP12.24□□□□□ -0.45
UBXN11-213ENST00000472155 IGKV1OR2-108A0A075B7D4 117 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms