RNA–Protein interactions for RNA: ENST00000471350.1

COMMD3-209, Transcript of COMM domain containing 3, humanhuman

TSL 2

Gene COMMD3, Length 476 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-209ENST00000471350 DAPL1A0PJW8 107 aa-0.4□□□□□ -2.47
COMMD3-209ENST00000471350 C5orf49A4QMS7 147 aa-0.4□□□□□ -2.47
COMMD3-209ENST00000471350 C2orf70A6NJV1 201 aa-0.4□□□□□ -2.47
COMMD3-209ENST00000471350 SULT1C2O00338 296 aa-0.4□□□□□ -2.47
COMMD3-209ENST00000471350 COX7A2LO14548 114 aa-0.4□□□□□ -2.47
COMMD3-209ENST00000471350 SYNGR1O43759 233 aa-0.4□□□□□ -2.47
COMMD3-209ENST00000471350 NSA2O95478 260 aaKnown RBP-0.4□□□□□ -2.47
COMMD3-209ENST00000471350 IGLV3-1P01715 115 aa-0.4□□□□□ -2.47
COMMD3-209ENST00000471350 IGHV3-7P01780 117 aa-0.4□□□□□ -2.47
COMMD3-209ENST00000471350 ATP5G1P05496 136 aa-0.4□□□□□ -2.47
COMMD3-209ENST00000471350 HLA-DMBP28068 263 aa-0.4□□□□□ -2.47
COMMD3-209ENST00000471350 CD151P48509 253 aa-0.4□□□□□ -2.47
COMMD3-209ENST00000471350 HPCAP84074 193 aa-0.4□□□□□ -2.47
COMMD3-209ENST00000471350 PDE6HQ13956 83 aa-0.4□□□□□ -2.47
COMMD3-209ENST00000471350 SOSTDC1Q6X4U4 206 aa-0.4□□□□□ -2.47
COMMD3-209ENST00000471350 SSX8Q7RTT4 187 aa-0.4□□□□□ -2.47
COMMD3-209ENST00000471350 ZNF550Q7Z398 422 aa-0.4□□□□□ -2.47
COMMD3-209ENST00000471350 FAM19A5Q7Z5A7 132 aaPredicted RBP-0.4□□□□□ -2.47
COMMD3-209ENST00000471350 TMEM251Q8N6I4 163 aa-0.4□□□□□ -2.47
COMMD3-209ENST00000471350 OR5B17Q8NGF7 314 aa-0.4□□□□□ -2.47
COMMD3-209ENST00000471350 RORBQ92753 470 aa-0.4□□□□□ -2.47
COMMD3-209ENST00000471350 FAM210AQ96ND0 272 aa-0.4□□□□□ -2.47
COMMD3-209ENST00000471350 TSPAN32Q96QS1 320 aa-0.4□□□□□ -2.47
COMMD3-209ENST00000471350 CDC42SE1Q9NRR8 79 aa-0.4□□□□□ -2.47
COMMD3-209ENST00000471350 TAS2R4Q9NYW5 299 aa-0.4□□□□□ -2.47
COMMD3-209ENST00000471350 MED12LQ86YW9 2145 aa-0.4□□□□□ -2.47
COMMD3-209ENST00000471350 COL1A1P02452 1464 aaPredicted RBP-0.41□□□□□ -2.47
COMMD3-209ENST00000471350 PIEZO1Q92508 2521 aa-0.41□□□□□ -2.47
COMMD3-209ENST00000471350 TNFAIP8O95379 198 aa-0.41□□□□□ -2.48
COMMD3-209ENST00000471350 APOMO95445 188 aa-0.41□□□□□ -2.48
COMMD3-209ENST00000471350 C1QAP02745 245 aa-0.41□□□□□ -2.48
COMMD3-209ENST00000471350 S100A7P31151 101 aa-0.41□□□□□ -2.48
COMMD3-209ENST00000471350 POLR2GP62487 172 aaKnown RBP eCLIP-0.41□□□□□ -2.48
COMMD3-209ENST00000471350 STX5Q13190 355 aa-0.41□□□□□ -2.48
COMMD3-209ENST00000471350 OR4D1Q15615 310 aa-0.41□□□□□ -2.48
COMMD3-209ENST00000471350 LPCAT4Q643R3 524 aa-0.41□□□□□ -2.48
COMMD3-209ENST00000471350 LCN15Q6UWW0 184 aa-0.41□□□□□ -2.48
COMMD3-209ENST00000471350 ST13P4Q8IZP2 240 aaPredicted RBP-0.41□□□□□ -2.48
COMMD3-209ENST00000471350 STOML3Q8TAV4 291 aa-0.41□□□□□ -2.48
COMMD3-209ENST00000471350 C4orf3Q8WVX3 66 aa-0.41□□□□□ -2.48
COMMD3-209ENST00000471350 ITFG2Q969R8 447 aa-0.41□□□□□ -2.48
COMMD3-209ENST00000471350 TMEM106AQ96A25 262 aa-0.41□□□□□ -2.48
COMMD3-209ENST00000471350 OPTNQ96CV9 577 aa-0.41□□□□□ -2.48
COMMD3-209ENST00000471350 CMTM5Q96DZ9 223 aa-0.41□□□□□ -2.48
COMMD3-209ENST00000471350 GNPNAT1Q96EK6 184 aaPredicted RBP-0.41□□□□□ -2.48
COMMD3-209ENST00000471350 ANKRD36BP1Q96IX9 119 aa-0.41□□□□□ -2.48
COMMD3-209ENST00000471350 MED10Q9BTT4 135 aa-0.41□□□□□ -2.48
COMMD3-209ENST00000471350 MROQ9BYG7 248 aa-0.41□□□□□ -2.48
COMMD3-209ENST00000471350 COMMD5Q9GZQ3 224 aa-0.41□□□□□ -2.48
COMMD3-209ENST00000471350 HIVEP3Q5T1R4 2406 aa-0.42□□□□□ -2.48
COMMD3-209ENST00000471350 DICER1Q9UPY3 1922 aaKnown RBP-0.42□□□□□ -2.48
COMMD3-209ENST00000471350 TPRP12270 2363 aaKnown RBP-0.42□□□□□ -2.48
COMMD3-209ENST00000471350 TMED7-TICAM2A0A0A6YYA0 188 aa-0.42□□□□□ -2.48
COMMD3-209ENST00000471350 TEX50A0A1B0GTY4 177 aa-0.42□□□□□ -2.48
COMMD3-209ENST00000471350 LINC00854A0A1B0GVQ3 168 aa-0.42□□□□□ -2.48
COMMD3-209ENST00000471350 GGT3PA6NGU5 568 aa-0.42□□□□□ -2.48
COMMD3-209ENST00000471350 ACOX3O15254 700 aa-0.42□□□□□ -2.48
COMMD3-209ENST00000471350 SGCEO43556 437 aa-0.42□□□□□ -2.48
COMMD3-209ENST00000471350 YEATS4O95619 227 aa-0.42□□□□□ -2.48
COMMD3-209ENST00000471350 DNAL4O96015 105 aa-0.42□□□□□ -2.48
COMMD3-209ENST00000471350 OTCP00480 354 aa-0.42□□□□□ -2.48
COMMD3-209ENST00000471350 REG1AP05451 166 aa-0.42□□□□□ -2.48
COMMD3-209ENST00000471350 RPS4Y1P22090 263 aaKnown RBP-0.42□□□□□ -2.48
COMMD3-209ENST00000471350 MIPP30301 263 aa-0.42□□□□□ -2.48
COMMD3-209ENST00000471350 ZNF80P51504 273 aaPredicted RBP-0.42□□□□□ -2.48
COMMD3-209ENST00000471350 FXYD6P3P58550 94 aa-0.42□□□□□ -2.48
COMMD3-209ENST00000471350 SUPT4H1P63272 117 aaKnown RBP-0.42□□□□□ -2.48
COMMD3-209ENST00000471350 HLA-DRB3P79483 266 aa-0.42□□□□□ -2.48
COMMD3-209ENST00000471350 C18orf21Q32NC0 220 aaPredicted RBP-0.42□□□□□ -2.48
COMMD3-209ENST00000471350 DEFB128Q7Z7B8 93 aa-0.42□□□□□ -2.48
COMMD3-209ENST00000471350 ATP6V1C2Q8NEY4 427 aa-0.42□□□□□ -2.48
COMMD3-209ENST00000471350 OR10D3Q8NH80 312 aa-0.42□□□□□ -2.48
COMMD3-209ENST00000471350 LRRC20Q8TCA0 184 aa-0.42□□□□□ -2.48
COMMD3-209ENST00000471350 FAM103A1Q9BTL3 118 aaKnown RBP-0.42□□□□□ -2.48
COMMD3-209ENST00000471350 GPR84Q9NQS5 396 aa-0.42□□□□□ -2.48
COMMD3-209ENST00000471350 CKLFQ9UBR5 152 aa-0.42□□□□□ -2.48
COMMD3-209ENST00000471350 AK3Q9UIJ7 227 aa-0.42□□□□□ -2.48
COMMD3-209ENST00000471350 ZNF106Q9H2Y7 1883 aaKnown RBP-0.42□□□□□ -2.48
COMMD3-209ENST00000471350 MAP3K19Q56UN5 1328 aa-0.42□□□□□ -2.48
COMMD3-209ENST00000471350 ASH1LQ9NR48 2969 aaKnown RBP-0.43□□□□□ -2.48
COMMD3-209ENST00000471350 I3L521 148 aa-0.43□□□□□ -2.48
COMMD3-209ENST00000471350 STX10O60499 249 aa-0.43□□□□□ -2.48
COMMD3-209ENST00000471350 CST4P01036 141 aa-0.43□□□□□ -2.48
COMMD3-209ENST00000471350 HTR1AP08908 422 aa-0.43□□□□□ -2.48
COMMD3-209ENST00000471350 PTMSP20962 102 aa-0.43□□□□□ -2.48
COMMD3-209ENST00000471350 FKBP2P26885 142 aaKnown RBP-0.43□□□□□ -2.48
COMMD3-209ENST00000471350 ZNF137PP52743 207 aa-0.43□□□□□ -2.48
COMMD3-209ENST00000471350 CNBPP62633 177 aaKnown RBP-0.43□□□□□ -2.48
COMMD3-209ENST00000471350 TNNC1P63316 161 aa-0.43□□□□□ -2.48
COMMD3-209ENST00000471350 RHOGP84095 191 aa-0.43□□□□□ -2.48
COMMD3-209ENST00000471350 RPL18Q07020 188 aaKnown RBP-0.43□□□□□ -2.48
COMMD3-209ENST00000471350 SMAGPQ0VAQ4 97 aa-0.43□□□□□ -2.48
COMMD3-209ENST00000471350 RBM48Q5RL73 367 aaKnown RBP-0.43□□□□□ -2.48
COMMD3-209ENST00000471350 TEX261Q6UWH6 196 aa-0.43□□□□□ -2.48
COMMD3-209ENST00000471350 TMEM156Q8N614 296 aa-0.43□□□□□ -2.48
COMMD3-209ENST00000471350 PLPP5Q8NEB5 264 aa-0.43□□□□□ -2.48
COMMD3-209ENST00000471350 OR7G1Q8NGA0 311 aa-0.43□□□□□ -2.48
COMMD3-209ENST00000471350 SFT2D1Q8WV19 159 aa-0.43□□□□□ -2.48
COMMD3-209ENST00000471350 CCDC124Q96CT7 223 aaKnown RBP-0.43□□□□□ -2.48
COMMD3-209ENST00000471350 OR8D2Q9GZM6 311 aa-0.43□□□□□ -2.48
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms