RNA–Protein interactions for RNA: ENST00000471307.6

CCDC39-202, Transcript of coiled-coil domain containing 39, humanhuman

TSL 3

Gene CCDC39, Length 783 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-202ENST00000471307 RAMP3O60896 148 aa3.57□□□□□ -1.84
CCDC39-202ENST00000471307 CRTAPO75718 401 aaPredicted RBP3.57□□□□□ -1.84
CCDC39-202ENST00000471307 TACC2O95359 2948 aa3.57□□□□□ -1.84
CCDC39-202ENST00000471307 LHBP01229 141 aa3.57□□□□□ -1.84
CCDC39-202ENST00000471307 IGKV1D-12P01611 117 aa3.57□□□□□ -1.84
CCDC39-202ENST00000471307 CD8AP01732 235 aa3.57□□□□□ -1.84
CCDC39-202ENST00000471307 MBP02144 154 aa3.57□□□□□ -1.84
CCDC39-202ENST00000471307 EIF4EP06730 217 aaKnown RBP3.57□□□□□ -1.84
CCDC39-202ENST00000471307 STAG3L2P0CL84 134 aa3.57□□□□□ -1.84
CCDC39-202ENST00000471307 PGA5P0DJD9 388 aa3.57□□□□□ -1.84
CCDC39-202ENST00000471307 CD40LGP29965 261 aa3.57□□□□□ -1.84
CCDC39-202ENST00000471307 RND3P61587 244 aa3.57□□□□□ -1.84
CCDC39-202ENST00000471307 PITPNAQ00169 270 aa3.57□□□□□ -1.84
CCDC39-202ENST00000471307 ZNF154Q13106 437 aa3.57□□□□□ -1.84
CCDC39-202ENST00000471307 ZNF846Q147U1 533 aa3.57□□□□□ -1.84
CCDC39-202ENST00000471307 ARL6IP1Q15041 203 aa3.57□□□□□ -1.84
CCDC39-202ENST00000471307 ZNF181Q2M3W8 571 aa3.57□□□□□ -1.84
CCDC39-202ENST00000471307 TRIM16LQ309B1 348 aa3.57□□□□□ -1.84
CCDC39-202ENST00000471307 Q3ZCU0 254 aa3.57□□□□□ -1.84
CCDC39-202ENST00000471307 CRYBG3Q68DQ2 2970 aa3.57□□□□□ -1.84
CCDC39-202ENST00000471307 CNIH2Q6PI25 160 aa3.57□□□□□ -1.84
CCDC39-202ENST00000471307 WDR82Q6UXN9 313 aa3.57□□□□□ -1.84
CCDC39-202ENST00000471307 WDR86Q86TI4 376 aa3.57□□□□□ -1.84
CCDC39-202ENST00000471307 LINC00596Q86U02 117 aa3.57□□□□□ -1.84
CCDC39-202ENST00000471307 FAM58AQ8N1B3 248 aa3.57□□□□□ -1.84
CCDC39-202ENST00000471307 OSR2Q8N2R0 312 aa3.57□□□□□ -1.84
CCDC39-202ENST00000471307 TMEM104Q8NE00 496 aa3.57□□□□□ -1.84
CCDC39-202ENST00000471307 OR10AD1Q8NGE0 317 aa3.57□□□□□ -1.84
CCDC39-202ENST00000471307 OR51T1Q8NGJ9 327 aa3.57□□□□□ -1.84
CCDC39-202ENST00000471307 OR5D18Q8NGL1 313 aa3.57□□□□□ -1.84
CCDC39-202ENST00000471307 OR5H6Q8NGV6 325 aa3.57□□□□□ -1.84
CCDC39-202ENST00000471307 OR11L1Q8NGX0 322 aa3.57□□□□□ -1.84
CCDC39-202ENST00000471307 RFESDQ8TAC1 157 aa3.57□□□□□ -1.84
CCDC39-202ENST00000471307 SLC25A38Q96DW6 304 aa3.57□□□□□ -1.84
CCDC39-202ENST00000471307 C16orf74Q96GX8 76 aa3.57□□□□□ -1.84
CCDC39-202ENST00000471307 TM2D1Q9BX74 207 aa3.57□□□□□ -1.84
CCDC39-202ENST00000471307 TMEM59Q9BXS4 323 aa3.57□□□□□ -1.84
CCDC39-202ENST00000471307 RAB1BQ9H0U4 201 aa3.57□□□□□ -1.84
CCDC39-202ENST00000471307 ATG5Q9H1Y0 275 aa3.57□□□□□ -1.84
CCDC39-202ENST00000471307 MIXL1Q9H2W2 232 aa3.57□□□□□ -1.84
CCDC39-202ENST00000471307 DYNLRB1Q9NP97 96 aa3.57□□□□□ -1.84
CCDC39-202ENST00000471307 GLS2Q9UI32 602 aa3.57□□□□□ -1.84
CCDC39-202ENST00000471307 CSDC2Q9Y534 153 aaKnown RBP3.57□□□□□ -1.84
CCDC39-202ENST00000471307 FASNP49327 2511 aaKnown RBP3.56□□□□□ -1.84
CCDC39-202ENST00000471307 SPG11Q96JI7 2443 aa3.56□□□□□ -1.84
CCDC39-202ENST00000471307 AKAP6Q13023 2319 aa3.56□□□□□ -1.84
CCDC39-202ENST00000471307 DOPEY2Q9Y3R5 2298 aa3.56□□□□□ -1.84
CCDC39-202ENST00000471307 GCN1Q92616 2671 aaKnown RBP3.56□□□□□ -1.84
CCDC39-202ENST00000471307 FAM231BA6NCW3 169 aa3.56□□□□□ -1.84
CCDC39-202ENST00000471307 H7C417 338 aa3.56□□□□□ -1.84
CCDC39-202ENST00000471307 SULT1C2O00338 296 aa3.56□□□□□ -1.84
CCDC39-202ENST00000471307 OR2J3O76001 311 aa3.56□□□□□ -1.84
CCDC39-202ENST00000471307 FSTL3O95633 263 aa3.56□□□□□ -1.84
CCDC39-202ENST00000471307 GLAP06280 429 aa3.56□□□□□ -1.84
CCDC39-202ENST00000471307 SOD3P08294 240 aa3.56□□□□□ -1.84
CCDC39-202ENST00000471307 FUT3P21217 361 aa3.56□□□□□ -1.84
CCDC39-202ENST00000471307 CDK2P24941 298 aa3.56□□□□□ -1.84
CCDC39-202ENST00000471307 PMELP40967 661 aa3.56□□□□□ -1.84
CCDC39-202ENST00000471307 NPBWR2P48146 333 aa3.56□□□□□ -1.84
CCDC39-202ENST00000471307 RBM11P57052 281 aaKnown RBP3.56□□□□□ -1.84
CCDC39-202ENST00000471307 FGF12P61328 243 aa3.56□□□□□ -1.84
CCDC39-202ENST00000471307 RAB11AP62491 216 aa3.56□□□□□ -1.84
CCDC39-202ENST00000471307 CCL8P80075 99 aa3.56□□□□□ -1.84
CCDC39-202ENST00000471307 MRPS10P82664 201 aaKnown RBP3.56□□□□□ -1.84
CCDC39-202ENST00000471307 MRPS11P82912 194 aaKnown RBP3.56□□□□□ -1.84
CCDC39-202ENST00000471307 UNC119Q13432 240 aa3.56□□□□□ -1.84
CCDC39-202ENST00000471307 LAGE3Q14657 143 aa3.56□□□□□ -1.84
CCDC39-202ENST00000471307 MPPED2Q15777 294 aa3.56□□□□□ -1.84
CCDC39-202ENST00000471307 MPV17LQ2QL34 196 aa3.56□□□□□ -1.84
CCDC39-202ENST00000471307 CDNFQ49AH0 187 aa3.56□□□□□ -1.84
CCDC39-202ENST00000471307 SPIN3Q5JUX0 258 aa3.56□□□□□ -1.84
CCDC39-202ENST00000471307 TMEM69Q5SWH9 247 aa3.56□□□□□ -1.84
CCDC39-202ENST00000471307 OR10K2Q6IF99 312 aa3.56□□□□□ -1.84
CCDC39-202ENST00000471307 C11orf71Q6IPW1 123 aa3.56□□□□□ -1.84
CCDC39-202ENST00000471307 FAM131AQ6UXB0 335 aa3.56□□□□□ -1.84
CCDC39-202ENST00000471307 ZCCHC24Q8N2G6 241 aaKnown RBP3.56□□□□□ -1.84
CCDC39-202ENST00000471307 GDPD1Q8N9F7 314 aa3.56□□□□□ -1.84
CCDC39-202ENST00000471307 OR1L6Q8NGR2 347 aa3.56□□□□□ -1.84
CCDC39-202ENST00000471307 OR10K1Q8NGX5 313 aa3.56□□□□□ -1.84
CCDC39-202ENST00000471307 OR10R2Q8NGX6 335 aa3.56□□□□□ -1.84
CCDC39-202ENST00000471307 NRIP2Q9BQI9 281 aa3.56□□□□□ -1.84
CCDC39-202ENST00000471307 SELENOIQ9C0D9 397 aa3.56□□□□□ -1.84
CCDC39-202ENST00000471307 LPAR5Q9H1C0 372 aa3.56□□□□□ -1.84
CCDC39-202ENST00000471307 BANF2Q9H503 90 aa3.56□□□□□ -1.84
CCDC39-202ENST00000471307 PLEKHF2Q9H8W4 249 aa3.56□□□□□ -1.84
CCDC39-202ENST00000471307 SPACA1Q9HBV2 294 aa3.56□□□□□ -1.84
CCDC39-202ENST00000471307 HES4Q9HCC6 221 aa3.56□□□□□ -1.84
CCDC39-202ENST00000471307 ST3GAL6Q9Y274 331 aa3.56□□□□□ -1.84
CCDC39-202ENST00000471307 CELSR2Q9HCU4 2923 aa3.56□□□□□ -1.84
CCDC39-202ENST00000471307 RAI1Q7Z5J4 1906 aaPredicted RBP3.56□□□□□ -1.84
CCDC39-202ENST00000471307 ARID1AO14497 2285 aa3.55□□□□□ -1.84
CCDC39-202ENST00000471307 USF3Q68DE3 2245 aa3.55□□□□□ -1.84
CCDC39-202ENST00000471307 IGHV1-69-2A0A0G2JMI3 117 aa3.55□□□□□ -1.84
CCDC39-202ENST00000471307 A0A0G2JMP0 313 aa3.55□□□□□ -1.84
CCDC39-202ENST00000471307 IGHV3-64DA0A0J9YX35 117 aa3.55□□□□□ -1.84
CCDC39-202ENST00000471307 A0A0X1KG70 313 aa3.55□□□□□ -1.84
CCDC39-202ENST00000471307 SERPINE3A8MV23 424 aa3.55□□□□□ -1.84
CCDC39-202ENST00000471307 PANO1I0J062 215 aa3.55□□□□□ -1.84
CCDC39-202ENST00000471307 GEMIN2O14893 280 aaKnown RBP3.55□□□□□ -1.84
CCDC39-202ENST00000471307 DEGS1O15121 323 aa3.55□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 78.8 ms