RNA–Protein interactions for RNA: ENST00000470998.1

HDAC8-216, Transcript of histone deacetylase 8, humanhuman

TSL 3

Gene HDAC8, Length 329 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-216ENST00000470998 RPUSD1Q9UJJ7 312 aaKnown RBP4.65□□□□□ -1.67
HDAC8-216ENST00000470998 PRNDQ9UKY0 176 aa4.65□□□□□ -1.67
HDAC8-216ENST00000470998 FOXA2Q9Y261 457 aaPredicted RBP4.65□□□□□ -1.67
HDAC8-216ENST00000470998 TMA7Q9Y2S6 64 aaKnown RBP4.65□□□□□ -1.67
HDAC8-216ENST00000470998 ANKRD17O75179 2603 aaKnown RBP4.64□□□□□ -1.67
HDAC8-216ENST00000470998 DCHS2Q6V1P9 2916 aa4.64□□□□□ -1.67
HDAC8-216ENST00000470998 PPIAL4EA0A075B759 164 aa4.64□□□□□ -1.67
HDAC8-216ENST00000470998 A0A087WWC5 75 aa4.64□□□□□ -1.67
HDAC8-216ENST00000470998 A0A087X0M5 115 aa4.64□□□□□ -1.67
HDAC8-216ENST00000470998 TRAV39A0A0B4J263 110 aa4.64□□□□□ -1.67
HDAC8-216ENST00000470998 A0A1B0GX30 115 aa4.64□□□□□ -1.67
HDAC8-216ENST00000470998 CXorf65A6NEN9 183 aa4.64□□□□□ -1.67
HDAC8-216ENST00000470998 RBFOX3A6NFN3 312 aa4.64□□□□□ -1.67
HDAC8-216ENST00000470998 DPRXA6NFQ7 191 aa4.64□□□□□ -1.67
HDAC8-216ENST00000470998 C15orf61A6NNL5 157 aa4.64□□□□□ -1.67
HDAC8-216ENST00000470998 CEBPZOSA8MTT3 80 aa4.64□□□□□ -1.67
HDAC8-216ENST00000470998 PPIAL4DF5H284 164 aa4.64□□□□□ -1.67
HDAC8-216ENST00000470998 INS-IGF2F8WCM5 200 aa4.64□□□□□ -1.67
HDAC8-216ENST00000470998 TMEM178BH3BS89 294 aa4.64□□□□□ -1.67
HDAC8-216ENST00000470998 M0R1X1 148 aa4.64□□□□□ -1.67
HDAC8-216ENST00000470998 OVOL3O00110 214 aa4.64□□□□□ -1.67
HDAC8-216ENST00000470998 DNASE2O00115 360 aaPredicted RBP4.64□□□□□ -1.67
HDAC8-216ENST00000470998 TSPAN4O14817 238 aa4.64□□□□□ -1.67
HDAC8-216ENST00000470998 FCGR3BO75015 233 aa4.64□□□□□ -1.67
HDAC8-216ENST00000470998 RBMXL2O75526 392 aaKnown RBP4.64□□□□□ -1.67
HDAC8-216ENST00000470998 KRASP01116 189 aa4.64□□□□□ -1.67
HDAC8-216ENST00000470998 APOA2P02652 100 aa4.64□□□□□ -1.67
HDAC8-216ENST00000470998 METTL15P1P0C7V9 234 aa4.64□□□□□ -1.67
HDAC8-216ENST00000470998 PPIAL4FP0DN26 164 aa4.64□□□□□ -1.67
HDAC8-216ENST00000470998 APOBEC3AP31941 199 aaPredicted RBP4.64□□□□□ -1.67
HDAC8-216ENST00000470998 G6PCP35575 357 aa4.64□□□□□ -1.67
HDAC8-216ENST00000470998 PPOXP50336 477 aa4.64□□□□□ -1.67
HDAC8-216ENST00000470998 ZNF137PP52743 207 aa4.64□□□□□ -1.67
HDAC8-216ENST00000470998 RPL30P62888 115 aaKnown RBP4.64□□□□□ -1.67
HDAC8-216ENST00000470998 DLK1P80370 383 aa4.64□□□□□ -1.67
HDAC8-216ENST00000470998 MRPS11P82912 194 aaKnown RBP4.64□□□□□ -1.67
HDAC8-216ENST00000470998 BSPH1Q075Z2 132 aa4.64□□□□□ -1.67
HDAC8-216ENST00000470998 C17orf58Q2M2W7 97 aa4.64□□□□□ -1.67
HDAC8-216ENST00000470998 FAM74A3Q4VXF1 159 aa4.64□□□□□ -1.67
HDAC8-216ENST00000470998 TMEM177Q53S58 311 aa4.64□□□□□ -1.67
HDAC8-216ENST00000470998 SOHLH1Q5JUK2 328 aa4.64□□□□□ -1.67
HDAC8-216ENST00000470998 SPANXN5Q5MJ07 72 aa4.64□□□□□ -1.67
HDAC8-216ENST00000470998 SLC25A48Q6ZT89 311 aaKnown RBP4.64□□□□□ -1.67
HDAC8-216ENST00000470998 SLC35E3Q7Z769 313 aa4.64□□□□□ -1.67
HDAC8-216ENST00000470998 THNSL2Q86YJ6 484 aa4.64□□□□□ -1.67
HDAC8-216ENST00000470998 ODF3L1Q8IXM7 274 aa4.64□□□□□ -1.67
HDAC8-216ENST00000470998 STPG3Q8N7X2 389 aa4.64□□□□□ -1.67
HDAC8-216ENST00000470998 C15orf54Q8N8G6 183 aa4.64□□□□□ -1.67
HDAC8-216ENST00000470998 ZNRF1Q8ND25 227 aa4.64□□□□□ -1.67
HDAC8-216ENST00000470998 OR5B3Q8NH48 314 aa4.64□□□□□ -1.67
HDAC8-216ENST00000470998 ZNF596Q8TC21 504 aa4.64□□□□□ -1.67
HDAC8-216ENST00000470998 TMEM190Q8WZ59 177 aa4.64□□□□□ -1.67
HDAC8-216ENST00000470998 RAB1CQ92928 201 aa4.64□□□□□ -1.67
HDAC8-216ENST00000470998 TMEM186Q96B77 213 aa4.64□□□□□ -1.67
HDAC8-216ENST00000470998 C5orf30Q96GV9 206 aa4.64□□□□□ -1.67
HDAC8-216ENST00000470998 ZNF714Q96N38 554 aa4.64□□□□□ -1.67
HDAC8-216ENST00000470998 SSX3Q99909 188 aa4.64□□□□□ -1.67
HDAC8-216ENST00000470998 PCGF1Q9BSM1 259 aa4.64□□□□□ -1.67
HDAC8-216ENST00000470998 DYNLRB1Q9NP97 96 aa4.64□□□□□ -1.67
HDAC8-216ENST00000470998 ENY2Q9NPA8 101 aa4.64□□□□□ -1.67
HDAC8-216ENST00000470998 SIRT7Q9NRC8 400 aa4.64□□□□□ -1.67
HDAC8-216ENST00000470998 TMEM106BQ9NUM4 274 aa4.64□□□□□ -1.67
HDAC8-216ENST00000470998 BET1LQ9NYM9 111 aa4.64□□□□□ -1.67
HDAC8-216ENST00000470998 CISD1Q9NZ45 108 aaKnown RBP4.64□□□□□ -1.67
HDAC8-216ENST00000470998 SLC25A10Q9UBX3 287 aaPredicted RBP4.64□□□□□ -1.67
HDAC8-216ENST00000470998 PPIAL4AQ9Y536 164 aa4.64□□□□□ -1.67
HDAC8-216ENST00000470998 ARL2-SNX15V9GYD0 113 aa4.64□□□□□ -1.67
HDAC8-216ENST00000470998 MED12LQ86YW9 2145 aa4.63□□□□□ -1.67
HDAC8-216ENST00000470998 IGHV3-64DA0A0J9YX35 117 aa4.63□□□□□ -1.67
HDAC8-216ENST00000470998 CTXND1A0A1B0GTU2 59 aa4.63□□□□□ -1.67
HDAC8-216ENST00000470998 UBE2L5PA0A1B0GUS4 154 aa4.63□□□□□ -1.67
HDAC8-216ENST00000470998 hCG_1809904A0A1W2PP81 198 aa4.63□□□□□ -1.67
HDAC8-216ENST00000470998 A0A1W2PPE2 198 aa4.63□□□□□ -1.67
HDAC8-216ENST00000470998 A0A1W2PR64 198 aa4.63□□□□□ -1.67
HDAC8-216ENST00000470998 A0A1W2PRV1 198 aa4.63□□□□□ -1.67
HDAC8-216ENST00000470998 LINC00473A8K010 186 aa4.63□□□□□ -1.67
HDAC8-216ENST00000470998 C17orf98A8MV24 154 aa4.63□□□□□ -1.67
HDAC8-216ENST00000470998 TMEM250H0YL14 139 aa4.63□□□□□ -1.67
HDAC8-216ENST00000470998 H3BP45 60 aa4.63□□□□□ -1.67
HDAC8-216ENST00000470998 TGOLN2O43493 480 aa4.63□□□□□ -1.67
HDAC8-216ENST00000470998 NDUFB3O43676 98 aa4.63□□□□□ -1.67
HDAC8-216ENST00000470998 RAMP3O60896 148 aa4.63□□□□□ -1.67
HDAC8-216ENST00000470998 SCO1O75880 301 aa4.63□□□□□ -1.67
HDAC8-216ENST00000470998 LY6G6DO95868 133 aa4.63□□□□□ -1.67
HDAC8-216ENST00000470998 IFNA17P01571 189 aa4.63□□□□□ -1.67
HDAC8-216ENST00000470998 BCL2P10415 239 aa4.63□□□□□ -1.67
HDAC8-216ENST00000470998 IAPPP10997 89 aa4.63□□□□□ -1.67
HDAC8-216ENST00000470998 FOLR2P14207 255 aa4.63□□□□□ -1.67
HDAC8-216ENST00000470998 PSMB3P49720 205 aa4.63□□□□□ -1.67
HDAC8-216ENST00000470998 ATP5J2P56134 94 aa4.63□□□□□ -1.67
HDAC8-216ENST00000470998 HSPE1P61604 102 aaKnown RBP4.63□□□□□ -1.67
HDAC8-216ENST00000470998 RPL31P62899 125 aaKnown RBP4.63□□□□□ -1.67
HDAC8-216ENST00000470998 TMEM267Q0VDI3 215 aaPredicted RBP4.63□□□□□ -1.67
HDAC8-216ENST00000470998 ZNF816Q0VGE8 651 aaPredicted RBP4.63□□□□□ -1.67
HDAC8-216ENST00000470998 RAB31Q13636 194 aa4.63□□□□□ -1.67
HDAC8-216ENST00000470998 ACOT6Q3I5F7 207 aaPredicted RBP4.63□□□□□ -1.67
HDAC8-216ENST00000470998 RNF212Q495C1 297 aa4.63□□□□□ -1.67
HDAC8-216ENST00000470998 ZNF672Q499Z4 452 aaPredicted RBP4.63□□□□□ -1.67
HDAC8-216ENST00000470998 PRR31Q5SQ13 230 aa4.63□□□□□ -1.67
HDAC8-216ENST00000470998 NCR3LG1Q68D85 454 aa4.63□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms