RNA–Protein interactions for RNA: ENST00000470942.1

HDAC6-218, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 668 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-218ENST00000470942 MIXL1Q9H2W2 232 aa12.05□□□□□ -0.48
HDAC6-218ENST00000470942 COMMD9Q9P000 198 aa12.05□□□□□ -0.48
HDAC6-218ENST00000470942 A0A1B0GW64 132 aa12.04□□□□□ -0.48
HDAC6-218ENST00000470942 NPIPB5A8MRT5 1133 aa12.04□□□□□ -0.48
HDAC6-218ENST00000470942 TRBV12-3P01733 135 aa12.04□□□□□ -0.48
HDAC6-218ENST00000470942 AREGP15514 252 aa12.04□□□□□ -0.48
HDAC6-218ENST00000470942 PSMB6P28072 239 aa12.04□□□□□ -0.48
HDAC6-218ENST00000470942 RPL5P46777 297 aaKnown RBP12.04□□□□□ -0.48
HDAC6-218ENST00000470942 CD69Q07108 199 aa12.04□□□□□ -0.48
HDAC6-218ENST00000470942 KLF5Q13887 457 aaPredicted RBP12.04□□□□□ -0.48
HDAC6-218ENST00000470942 TATDN3Q17R31 274 aa12.04□□□□□ -0.48
HDAC6-218ENST00000470942 RPEL1Q2QD12 228 aa12.04□□□□□ -0.48
HDAC6-218ENST00000470942 VAX1Q5SQQ9 334 aa12.04□□□□□ -0.48
HDAC6-218ENST00000470942 LAX1Q8IWV1 398 aa12.04□□□□□ -0.48
HDAC6-218ENST00000470942 NECAP1Q8NC96 275 aa12.04□□□□□ -0.48
HDAC6-218ENST00000470942 OR6Q1Q8NGQ2 317 aa12.04□□□□□ -0.48
HDAC6-218ENST00000470942 FCAMRQ8WWV6 532 aa12.04□□□□□ -0.48
HDAC6-218ENST00000470942 ABHD1Q96SE0 405 aa12.04□□□□□ -0.48
HDAC6-218ENST00000470942 RSRP1Q9BUV0 290 aa12.04□□□□□ -0.48
HDAC6-218ENST00000470942 FBXL7Q9UJT9 491 aa12.04□□□□□ -0.48
HDAC6-218ENST00000470942 COL7A1Q02388 2944 aa12.03□□□□□ -0.48
HDAC6-218ENST00000470942 MARCH11A6NNE9 402 aa12.03□□□□□ -0.48
HDAC6-218ENST00000470942 TPPPO94811 219 aa12.03□□□□□ -0.48
HDAC6-218ENST00000470942 DHFRP00374 187 aa12.03□□□□□ -0.48
HDAC6-218ENST00000470942 REG1AP05451 166 aa12.03□□□□□ -0.48
HDAC6-218ENST00000470942 DEFA4P12838 97 aa12.03□□□□□ -0.48
HDAC6-218ENST00000470942 SYNJ2BPP57105 145 aa12.03□□□□□ -0.48
HDAC6-218ENST00000470942 C15orf32Q32M92 178 aa12.03□□□□□ -0.48
HDAC6-218ENST00000470942 RNASE10Q5GAN6 216 aaKnown RBP12.03□□□□□ -0.48
HDAC6-218ENST00000470942 SLC38A6Q8IZM9 456 aa12.03□□□□□ -0.48
HDAC6-218ENST00000470942 BCL7BQ9BQE9 202 aa12.03□□□□□ -0.48
HDAC6-218ENST00000470942 MTFP1Q9UDX5 166 aa12.03□□□□□ -0.48
HDAC6-218ENST00000470942 KRASP01116 189 aa12.02□□□□□ -0.49
HDAC6-218ENST00000470942 CD3DP04234 171 aa12.02□□□□□ -0.49
HDAC6-218ENST00000470942 CRYGCP07315 174 aa12.02□□□□□ -0.49
HDAC6-218ENST00000470942 PGAM2P15259 253 aa12.02□□□□□ -0.49
HDAC6-218ENST00000470942 SPNP16150 400 aa12.02□□□□□ -0.49
HDAC6-218ENST00000470942 G6PCP35575 357 aa12.02□□□□□ -0.49
HDAC6-218ENST00000470942 UCP3P55916 312 aa12.02□□□□□ -0.49
HDAC6-218ENST00000470942 OR2B8PP59922 312 aa12.02□□□□□ -0.49
HDAC6-218ENST00000470942 ZNF585BQ52M93 769 aa12.02□□□□□ -0.49
HDAC6-218ENST00000470942 TBC1D26Q86UD7 250 aa12.02□□□□□ -0.49
HDAC6-218ENST00000470942 HAPLN4Q86UW8 402 aa12.02□□□□□ -0.49
HDAC6-218ENST00000470942 DYNC2LI1Q8TCX1 351 aa12.02□□□□□ -0.49
HDAC6-218ENST00000470942 B9D2Q9BPU9 175 aa12.02□□□□□ -0.49
HDAC6-218ENST00000470942 LSM4Q9Y4Z0 139 aaKnown RBP12.02□□□□□ -0.49
HDAC6-218ENST00000470942 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.01□□□□□ -0.49
HDAC6-218ENST00000470942 CGB1A6NKQ9 187 aa12.01□□□□□ -0.49
HDAC6-218ENST00000470942 SNAPC5O75971 98 aa12.01□□□□□ -0.49
HDAC6-218ENST00000470942 NDUFB8O95169 186 aa12.01□□□□□ -0.49
HDAC6-218ENST00000470942 HIST1H1BP16401 226 aaKnown RBP12.01□□□□□ -0.49
HDAC6-218ENST00000470942 CTRB1P17538 263 aa12.01□□□□□ -0.49
HDAC6-218ENST00000470942 CTRB2Q6GPI1 263 aa12.01□□□□□ -0.49
HDAC6-218ENST00000470942 OR9G4Q8NGQ1 327 aa12.01□□□□□ -0.49
HDAC6-218ENST00000470942 DIRAS2Q96HU8 199 aa12.01□□□□□ -0.49
HDAC6-218ENST00000470942 FANCD2OSQ96PS1 177 aa12.01□□□□□ -0.49
HDAC6-218ENST00000470942 HINT2Q9BX68 163 aa12.01□□□□□ -0.49
HDAC6-218ENST00000470942 CCDC59Q9P031 241 aaKnown RBP12.01□□□□□ -0.49
HDAC6-218ENST00000470942 TEX50A0A1B0GTY4 177 aa12□□□□□ -0.49
HDAC6-218ENST00000470942 GABARAPH6UMI1 98 aa12□□□□□ -0.49
HDAC6-218ENST00000470942 BMPR1BO00238 502 aa12□□□□□ -0.49
HDAC6-218ENST00000470942 IGHV3-23P01764 117 aa12□□□□□ -0.49
HDAC6-218ENST00000470942 TRAPPC2P0DI81 140 aa12□□□□□ -0.49
HDAC6-218ENST00000470942 TRAPPC2BP0DI82 140 aa12□□□□□ -0.49
HDAC6-218ENST00000470942 GP9P14770 177 aa12□□□□□ -0.49
HDAC6-218ENST00000470942 TBPP20226 339 aa12□□□□□ -0.49
HDAC6-218ENST00000470942 TAS2R19P59542 299 aa12□□□□□ -0.49
HDAC6-218ENST00000470942 MRPS10P82664 201 aaKnown RBP12□□□□□ -0.49
HDAC6-218ENST00000470942 IL18Q14116 193 aa12□□□□□ -0.49
HDAC6-218ENST00000470942 ARRDC1Q8N5I2 433 aa12□□□□□ -0.49
HDAC6-218ENST00000470942 TMEM229BQ8NBD8 167 aa12□□□□□ -0.49
HDAC6-218ENST00000470942 OR1L8Q8NGR8 309 aa12□□□□□ -0.49
HDAC6-218ENST00000470942 ISOC1Q96CN7 298 aa12□□□□□ -0.49
HDAC6-218ENST00000470942 QTRT1Q9BXR0 403 aaKnown RBP12□□□□□ -0.49
HDAC6-218ENST00000470942 C6orf62Q9GZU0 229 aaPredicted RBP12□□□□□ -0.49
HDAC6-218ENST00000470942 NSG2Q9Y328 171 aa12□□□□□ -0.49
HDAC6-218ENST00000470942 S4R3C0 116 aa12□□□□□ -0.49
HDAC6-218ENST00000470942 IGLC7A0M8Q6 106 aa11.99□□□□□ -0.49
HDAC6-218ENST00000470942 PPP5D1E7EU14 171 aa11.99□□□□□ -0.49
HDAC6-218ENST00000470942 H3BMQ9 156 aa11.99□□□□□ -0.49
HDAC6-218ENST00000470942 RAB3DO95716 219 aa11.99□□□□□ -0.49
HDAC6-218ENST00000470942 FGF2P09038 288 aa11.99□□□□□ -0.49
HDAC6-218ENST00000470942 PI3P19957 117 aa11.99□□□□□ -0.49
HDAC6-218ENST00000470942 PPP5CP53041 499 aa11.99□□□□□ -0.49
HDAC6-218ENST00000470942 SCGB2B2Q4G0G5 96 aa11.99□□□□□ -0.49
HDAC6-218ENST00000470942 FAM209BQ5JX69 171 aa11.99□□□□□ -0.49
HDAC6-218ENST00000470942 THOC7Q6I9Y2 204 aaKnown RBP11.99□□□□□ -0.49
HDAC6-218ENST00000470942 OR10W1Q8NGF6 305 aa11.99□□□□□ -0.49
HDAC6-218ENST00000470942 EEF1AKMT3Q96AZ1 226 aa11.99□□□□□ -0.49
HDAC6-218ENST00000470942 SRSF8Q9BRL6 282 aaKnown RBP11.99□□□□□ -0.49
HDAC6-218ENST00000470942 FAM212BQ9NTI7 297 aaPredicted RBP11.99□□□□□ -0.49
HDAC6-218ENST00000470942 PEMTQ9UBM1 199 aa11.99□□□□□ -0.49
HDAC6-218ENST00000470942 OR51B2Q9Y5P1 312 aa11.99□□□□□ -0.49
HDAC6-218ENST00000470942 IGLV1-51P01701 117 aa11.98□□□□□ -0.49
HDAC6-218ENST00000470942 CD74P04233 296 aa11.98□□□□□ -0.49
HDAC6-218ENST00000470942 OR13C7P0DN81 318 aa11.98□□□□□ -0.49
HDAC6-218ENST00000470942 SSBP1Q04837 148 aaKnown RBP11.98□□□□□ -0.49
HDAC6-218ENST00000470942 STEAP1BQ6NZ63 245 aa11.98□□□□□ -0.49
HDAC6-218ENST00000470942 CLEC19AQ6UXS0 136 aa11.98□□□□□ -0.49
HDAC6-218ENST00000470942 LHFPL1Q86WI0 220 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms