RNA–Protein interactions for RNA: ENST00000470652.1

COL9A1-206, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 5

Gene COL9A1, Length 531 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-206ENST00000470652 PDCD6O75340 191 aa2.9□□□□□ -1.95
COL9A1-206ENST00000470652 GOSR1O95249 250 aa2.9□□□□□ -1.95
COL9A1-206ENST00000470652 CYB5AP00167 134 aa2.9□□□□□ -1.95
COL9A1-206ENST00000470652 APOA1P02647 267 aa2.9□□□□□ -1.95
COL9A1-206ENST00000470652 PMP2P02689 132 aa2.9□□□□□ -1.95
COL9A1-206ENST00000470652 MT-ND4P03905 459 aa2.9□□□□□ -1.95
COL9A1-206ENST00000470652 CSF3P09919 207 aa2.9□□□□□ -1.95
COL9A1-206ENST00000470652 HIST1H1DP16402 221 aaKnown RBP2.9□□□□□ -1.95
COL9A1-206ENST00000470652 USF1P22415 310 aaPredicted RBP2.9□□□□□ -1.95
COL9A1-206ENST00000470652 CD24P25063 80 aa2.9□□□□□ -1.95
COL9A1-206ENST00000470652 NFYBP25208 207 aa2.9□□□□□ -1.95
COL9A1-206ENST00000470652 HLA-DMAP28067 261 aa2.9□□□□□ -1.95
COL9A1-206ENST00000470652 PPP1CCP36873 323 aaKnown RBP2.9□□□□□ -1.95
COL9A1-206ENST00000470652 CFHR2P36980 270 aa2.9□□□□□ -1.95
COL9A1-206ENST00000470652 REG1BP48304 166 aa2.9□□□□□ -1.95
COL9A1-206ENST00000470652 MEOX2P50222 304 aa2.9□□□□□ -1.95
COL9A1-206ENST00000470652 GNB2P62879 340 aa2.9□□□□□ -1.95
COL9A1-206ENST00000470652 ARFRP1Q13795 201 aa2.9□□□□□ -1.95
COL9A1-206ENST00000470652 IL18Q14116 193 aa2.9□□□□□ -1.95
COL9A1-206ENST00000470652 ZNF181Q2M3W8 571 aa2.9□□□□□ -1.95
COL9A1-206ENST00000470652 TMEM249Q2WGJ8 235 aa2.9□□□□□ -1.95
COL9A1-206ENST00000470652 KLF17Q5JT82 389 aaPredicted RBP2.9□□□□□ -1.95
COL9A1-206ENST00000470652 FAM131AQ6UXB0 335 aa2.9□□□□□ -1.95
COL9A1-206ENST00000470652 BRD3OSQ6XYD6 125 aa2.9□□□□□ -1.95
COL9A1-206ENST00000470652 DYNAPQ8N1N2 210 aa2.9□□□□□ -1.95
COL9A1-206ENST00000470652 OR8B3Q8NGG8 313 aa2.9□□□□□ -1.95
COL9A1-206ENST00000470652 KCNG3Q8TAE7 436 aa2.9□□□□□ -1.95
COL9A1-206ENST00000470652 IL1F10Q8WWZ1 152 aa2.9□□□□□ -1.95
COL9A1-206ENST00000470652 RAB1CQ92928 201 aa2.9□□□□□ -1.95
COL9A1-206ENST00000470652 MRGPRFQ96AM1 343 aa2.9□□□□□ -1.95
COL9A1-206ENST00000470652 DIRAS2Q96HU8 199 aa2.9□□□□□ -1.95
COL9A1-206ENST00000470652 OR8B2Q96RD0 313 aa2.9□□□□□ -1.95
COL9A1-206ENST00000470652 TBX15Q96SF7 602 aa2.9□□□□□ -1.95
COL9A1-206ENST00000470652 FOXC2Q99958 501 aa2.9□□□□□ -1.95
COL9A1-206ENST00000470652 CMSS1Q9BQ75 279 aaKnown RBP2.9□□□□□ -1.95
COL9A1-206ENST00000470652 ST6GALNAC5Q9BVH7 336 aa2.9□□□□□ -1.95
COL9A1-206ENST00000470652 SUCNR1Q9BXA5 334 aa2.9□□□□□ -1.95
COL9A1-206ENST00000470652 SRRQ9GZT4 340 aa2.9□□□□□ -1.95
COL9A1-206ENST00000470652 CST11Q9H112 138 aa2.9□□□□□ -1.95
COL9A1-206ENST00000470652 Q9HAA7 133 aa2.9□□□□□ -1.95
COL9A1-206ENST00000470652 ZNF286AQ9HBT8 521 aa2.9□□□□□ -1.95
COL9A1-206ENST00000470652 MYOZ1Q9NP98 299 aaPredicted RBP2.9□□□□□ -1.95
COL9A1-206ENST00000470652 PLEKHJ1Q9NW61 149 aa2.9□□□□□ -1.95
COL9A1-206ENST00000470652 ABRACLQ9P1F3 81 aa2.9□□□□□ -1.95
COL9A1-206ENST00000470652 CLN8Q9UBY8 286 aa2.9□□□□□ -1.95
COL9A1-206ENST00000470652 OPN4Q9UHM6 478 aa2.9□□□□□ -1.95
COL9A1-206ENST00000470652 RPUSD1Q9UJJ7 312 aaKnown RBP2.9□□□□□ -1.95
COL9A1-206ENST00000470652 NOP16Q9Y3C1 178 aaKnown RBP2.9□□□□□ -1.95
COL9A1-206ENST00000470652 MAST4O15021 2626 aa2.9□□□□□ -1.95
COL9A1-206ENST00000470652 MTORP42345 2549 aa2.9□□□□□ -1.95
COL9A1-206ENST00000470652 TRAV40A0A0B4J280 105 aa2.89□□□□□ -1.95
COL9A1-206ENST00000470652 PPIAL4CA0A0B4J2A2 164 aa2.89□□□□□ -1.95
COL9A1-206ENST00000470652 IGKV1D-13A0A0B4J2D9 117 aa2.89□□□□□ -1.95
COL9A1-206ENST00000470652 IGHV2-70DA0A0C4DH43 119 aa2.89□□□□□ -1.95
COL9A1-206ENST00000470652 TMEM30CPA0ZSE6 113 aa2.89□□□□□ -1.95
COL9A1-206ENST00000470652 A4D1N5 150 aa2.89□□□□□ -1.95
COL9A1-206ENST00000470652 FABP12A6NFH5 140 aa2.89□□□□□ -1.95
COL9A1-206ENST00000470652 ZNF736B4DX44 427 aaPredicted RBP2.89□□□□□ -1.95
COL9A1-206ENST00000470652 MCRIP1C9JLW8 97 aa2.89□□□□□ -1.95
COL9A1-206ENST00000470652 RNASEK-C17orf49H0YIS7 233 aa2.89□□□□□ -1.95
COL9A1-206ENST00000470652 BET1O15155 118 aa2.89□□□□□ -1.95
COL9A1-206ENST00000470652 TSC22D2O75157 780 aa2.89□□□□□ -1.95
COL9A1-206ENST00000470652 NAPSAO96009 420 aa2.89□□□□□ -1.95
COL9A1-206ENST00000470652 TGFAP01135 160 aa2.89□□□□□ -1.95
COL9A1-206ENST00000470652 HBZP02008 142 aa2.89□□□□□ -1.95
COL9A1-206ENST00000470652 UBBP0CG47 229 aa2.89□□□□□ -1.95
COL9A1-206ENST00000470652 PPIAL4GP0DN37 164 aa2.89□□□□□ -1.95
COL9A1-206ENST00000470652 CGB3P0DN86 165 aa2.89□□□□□ -1.95
COL9A1-206ENST00000470652 CGB7P0DN87 165 aa2.89□□□□□ -1.95
COL9A1-206ENST00000470652 IGKV1-13P0DP09 117 aa2.89□□□□□ -1.95
COL9A1-206ENST00000470652 PGAM2P15259 253 aa2.89□□□□□ -1.95
COL9A1-206ENST00000470652 MUC1P15941 1255 aaPredicted RBP2.89□□□□□ -1.95
COL9A1-206ENST00000470652 FUT3P21217 361 aa2.89□□□□□ -1.95
COL9A1-206ENST00000470652 NFYAP23511 347 aaPredicted RBP2.89□□□□□ -1.95
COL9A1-206ENST00000470652 CD40LGP29965 261 aa2.89□□□□□ -1.95
COL9A1-206ENST00000470652 SOX6P35712 828 aa2.89□□□□□ -1.95
COL9A1-206ENST00000470652 TMEM33P57088 247 aa2.89□□□□□ -1.95
COL9A1-206ENST00000470652 GNG2P59768 71 aa2.89□□□□□ -1.95
COL9A1-206ENST00000470652 RPL31P62899 125 aaKnown RBP2.89□□□□□ -1.95
COL9A1-206ENST00000470652 MRPS11P82912 194 aaKnown RBP2.89□□□□□ -1.95
COL9A1-206ENST00000470652 BAMBIQ13145 260 aa2.89□□□□□ -1.95
COL9A1-206ENST00000470652 HMGN3Q15651 99 aa2.89□□□□□ -1.95
COL9A1-206ENST00000470652 MPV17LQ2QL34 196 aa2.89□□□□□ -1.95
COL9A1-206ENST00000470652 TMEM155Q4W5P6 130 aa2.89□□□□□ -1.95
COL9A1-206ENST00000470652 PYDC2Q56P42 97 aa2.89□□□□□ -1.95
COL9A1-206ENST00000470652 SPIN3Q5JUX0 258 aa2.89□□□□□ -1.95
COL9A1-206ENST00000470652 FAM120AOSQ5T036 256 aa2.89□□□□□ -1.95
COL9A1-206ENST00000470652 HACD4Q5VWC8 232 aa2.89□□□□□ -1.95
COL9A1-206ENST00000470652 FAHD2BQ6P2I3 314 aaPredicted RBP2.89□□□□□ -1.95
COL9A1-206ENST00000470652 ZNF880Q6PDB4 577 aa2.89□□□□□ -1.95
COL9A1-206ENST00000470652 BTNL3Q6UXE8 466 aa2.89□□□□□ -1.95
COL9A1-206ENST00000470652 GDPD3Q7L5L3 318 aa2.89□□□□□ -1.95
COL9A1-206ENST00000470652 VMO1Q7Z5L0 202 aa2.89□□□□□ -1.95
COL9A1-206ENST00000470652 LHFPL4Q7Z7J7 247 aa2.89□□□□□ -1.95
COL9A1-206ENST00000470652 KRTAP11-1Q8IUC1 163 aa2.89□□□□□ -1.95
COL9A1-206ENST00000470652 CDH26Q8IXH8 852 aa2.89□□□□□ -1.95
COL9A1-206ENST00000470652 LRRC75A-AS1Q8N1F1 130 aa2.89□□□□□ -1.95
COL9A1-206ENST00000470652 ZNF561Q8N587 486 aa2.89□□□□□ -1.95
COL9A1-206ENST00000470652 SPICQ8N5J4 248 aa2.89□□□□□ -1.95
COL9A1-206ENST00000470652 LY6G5BQ8NDX9 201 aa2.89□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms