RNA–Protein interactions for RNA: ENST00000470167.1

COL3A1-205, Transcript of collagen type III alpha 1 chain, humanhuman

TSL 2

Gene COL3A1, Length 628 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1-205ENST00000470167 CSRP3P50461 194 aa4.21□□□□□ -1.74
COL3A1-205ENST00000470167 SLURP1P55000 103 aa4.21□□□□□ -1.74
COL3A1-205ENST00000470167 CYCSP99999 105 aaKnown RBP4.21□□□□□ -1.74
COL3A1-205ENST00000470167 UNC119Q13432 240 aa4.21□□□□□ -1.74
COL3A1-205ENST00000470167 GGTLC2Q14390 218 aa4.21□□□□□ -1.74
COL3A1-205ENST00000470167 HES1Q14469 280 aa4.21□□□□□ -1.74
COL3A1-205ENST00000470167 OR7A5Q15622 319 aa4.21□□□□□ -1.74
COL3A1-205ENST00000470167 KLF17Q5JT82 389 aaPredicted RBP4.21□□□□□ -1.74
COL3A1-205ENST00000470167 STPG1Q5TH74 334 aa4.21□□□□□ -1.74
COL3A1-205ENST00000470167 SLC25A34Q6PIV7 304 aa4.21□□□□□ -1.74
COL3A1-205ENST00000470167 CMC1Q7Z7K0 106 aa4.21□□□□□ -1.74
COL3A1-205ENST00000470167 SLC25A42Q86VD7 318 aa4.21□□□□□ -1.74
COL3A1-205ENST00000470167 TMEM256Q8N2U0 113 aa4.21□□□□□ -1.74
COL3A1-205ENST00000470167 ZFP62Q8NB50 900 aaPredicted RBP4.21□□□□□ -1.74
COL3A1-205ENST00000470167 OR2AJ1Q8NGZ0 328 aa4.21□□□□□ -1.74
COL3A1-205ENST00000470167 SCGB1C1Q8TD33 95 aa4.21□□□□□ -1.74
COL3A1-205ENST00000470167 PPP1R1CQ8WVI7 109 aa4.21□□□□□ -1.74
COL3A1-205ENST00000470167 TMEM37Q8WXS4 190 aa4.21□□□□□ -1.74
COL3A1-205ENST00000470167 FGF14Q92915 247 aa4.21□□□□□ -1.74
COL3A1-205ENST00000470167 LINC00526Q96FQ7 95 aa4.21□□□□□ -1.74
COL3A1-205ENST00000470167 C20orf78Q9BR46 151 aa4.21□□□□□ -1.74
COL3A1-205ENST00000470167 TMEM59Q9BXS4 323 aa4.21□□□□□ -1.74
COL3A1-205ENST00000470167 TVP23BQ9NYZ1 205 aa4.21□□□□□ -1.74
COL3A1-205ENST00000470167 TMED7Q9Y3B3 224 aa4.21□□□□□ -1.74
COL3A1-205ENST00000470167 OR1A2Q9Y585 309 aa4.21□□□□□ -1.74
COL3A1-205ENST00000470167 PXMP4Q9Y6I8 212 aa4.21□□□□□ -1.74
COL3A1-205ENST00000470167 KRTAP4-8A0A0G2JLE6 195 aa4.2□□□□□ -1.74
COL3A1-205ENST00000470167 LOC107986453A0A1B0GWG9 222 aa4.2□□□□□ -1.74
COL3A1-205ENST00000470167 SHISA9B4DS77 424 aa4.2□□□□□ -1.74
COL3A1-205ENST00000470167 H3BMG7 143 aa4.2□□□□□ -1.74
COL3A1-205ENST00000470167 SYS1-DBNDD2H3BUS1 97 aa4.2□□□□□ -1.74
COL3A1-205ENST00000470167 UQCRQO14949 82 aa4.2□□□□□ -1.74
COL3A1-205ENST00000470167 NUPR1O60356 82 aa4.2□□□□□ -1.74
COL3A1-205ENST00000470167 ZNF737O75373 536 aa4.2□□□□□ -1.74
COL3A1-205ENST00000470167 STK17BO94768 372 aa4.2□□□□□ -1.74
COL3A1-205ENST00000470167 DPM2O94777 84 aa4.2□□□□□ -1.74
COL3A1-205ENST00000470167 DUSP14O95147 198 aaKnown RBP4.2□□□□□ -1.74
COL3A1-205ENST00000470167 NDUFC2O95298 119 aa4.2□□□□□ -1.74
COL3A1-205ENST00000470167 HBE1P02100 147 aa4.2□□□□□ -1.74
COL3A1-205ENST00000470167 ATP1B1P05026 303 aa4.2□□□□□ -1.74
COL3A1-205ENST00000470167 ZNF286BP0CG31 522 aa4.2□□□□□ -1.74
COL3A1-205ENST00000470167 P0DMU3 169 aa4.2□□□□□ -1.74
COL3A1-205ENST00000470167 FAM231AP0DMU4 169 aa4.2□□□□□ -1.74
COL3A1-205ENST00000470167 FAM231CP0DMU5 169 aa4.2□□□□□ -1.74
COL3A1-205ENST00000470167 KLK2P20151 261 aa4.2□□□□□ -1.74
COL3A1-205ENST00000470167 MAGEA5P43359 124 aa4.2□□□□□ -1.74
COL3A1-205ENST00000470167 PPICP45877 212 aa4.2□□□□□ -1.74
COL3A1-205ENST00000470167 TMEM258P61165 79 aa4.2□□□□□ -1.74
COL3A1-205ENST00000470167 PLGLB1Q02325 96 aa4.2□□□□□ -1.74
COL3A1-205ENST00000470167 PMAIP1Q13794 54 aa4.2□□□□□ -1.74
COL3A1-205ENST00000470167 Q499Y3 187 aa4.2□□□□□ -1.74
COL3A1-205ENST00000470167 DMRTC1Q5HYR2 192 aa4.2□□□□□ -1.74
COL3A1-205ENST00000470167 SLC25A30Q5SVS4 291 aa4.2□□□□□ -1.74
COL3A1-205ENST00000470167 FAM27D1Q5T7N8 215 aa4.2□□□□□ -1.74
COL3A1-205ENST00000470167 LCN12Q6JVE5 192 aa4.2□□□□□ -1.74
COL3A1-205ENST00000470167 ZNF322Q6U7Q0 402 aaPredicted RBP4.2□□□□□ -1.74
COL3A1-205ENST00000470167 IGFL2Q6UWQ7 119 aa4.2□□□□□ -1.74
COL3A1-205ENST00000470167 SPATA12Q7Z6I5 190 aa4.2□□□□□ -1.74
COL3A1-205ENST00000470167 C11orf53Q8IXP5 236 aa4.2□□□□□ -1.74
COL3A1-205ENST00000470167 C3orf22Q8N5N4 141 aa4.2□□□□□ -1.74
COL3A1-205ENST00000470167 SUMF1Q8NBK3 374 aa4.2□□□□□ -1.74
COL3A1-205ENST00000470167 OR4X2Q8NGF9 303 aa4.2□□□□□ -1.74
COL3A1-205ENST00000470167 CT55Q8WUE5 264 aa4.2□□□□□ -1.74
COL3A1-205ENST00000470167 UBE2E3Q969T4 207 aa4.2□□□□□ -1.74
COL3A1-205ENST00000470167 SLC25A44Q96H78 314 aaPredicted RBP4.2□□□□□ -1.74
COL3A1-205ENST00000470167 WDYHV1Q96HA8 205 aa4.2□□□□□ -1.74
COL3A1-205ENST00000470167 PGLYRP2Q96PD5 576 aa4.2□□□□□ -1.74
COL3A1-205ENST00000470167 PDCD1LG2Q9BQ51 273 aa4.2□□□□□ -1.74
COL3A1-205ENST00000470167 KRTAP4-12Q9BQ66 201 aa4.2□□□□□ -1.74
COL3A1-205ENST00000470167 NMES1Q9C002 83 aa4.2□□□□□ -1.74
COL3A1-205ENST00000470167 MANBALQ9NQG1 85 aa4.2□□□□□ -1.74
COL3A1-205ENST00000470167 C21orf62Q9NYP8 219 aa4.2□□□□□ -1.74
COL3A1-205ENST00000470167 Q9UF83 564 aa4.2□□□□□ -1.74
COL3A1-205ENST00000470167 PRO0461Q9UI25 63 aa4.2□□□□□ -1.74
COL3A1-205ENST00000470167 TP53TG3Q9ULZ0 132 aa4.2□□□□□ -1.74
COL3A1-205ENST00000470167 KLHDC2Q9Y2U9 406 aa4.2□□□□□ -1.74
COL3A1-205ENST00000470167 SBF2Q86WG5 1849 aa4.2□□□□□ -1.74
COL3A1-205ENST00000470167 TECPR2O15040 1411 aa4.2□□□□□ -1.74
COL3A1-205ENST00000470167 ANK1P16157 1881 aa4.2□□□□□ -1.74
COL3A1-205ENST00000470167 DOCK1Q14185 1865 aa4.2□□□□□ -1.74
COL3A1-205ENST00000470167 PDCD11Q14690 1871 aaKnown RBP4.2□□□□□ -1.74
COL3A1-205ENST00000470167 AFDNP55196 1824 aaKnown RBP4.19□□□□□ -1.74
COL3A1-205ENST00000470167 COL11A2P13942 1736 aaPredicted RBP4.19□□□□□ -1.74
COL3A1-205ENST00000470167 DDX60LQ5H9U9 1706 aaKnown RBP4.19□□□□□ -1.74
COL3A1-205ENST00000470167 EPM2AB3EWF7 344 aa4.19□□□□□ -1.74
COL3A1-205ENST00000470167 H3BUT2 72 aa4.19□□□□□ -1.74
COL3A1-205ENST00000470167 EFNA2O43921 213 aa4.19□□□□□ -1.74
COL3A1-205ENST00000470167 CXCL13O43927 109 aa4.19□□□□□ -1.74
COL3A1-205ENST00000470167 PPP1R3DO95685 299 aa4.19□□□□□ -1.74
COL3A1-205ENST00000470167 ATP5G1P05496 136 aa4.19□□□□□ -1.74
COL3A1-205ENST00000470167 CECR9P0C854 216 aa4.19□□□□□ -1.74
COL3A1-205ENST00000470167 CRYGAP11844 174 aa4.19□□□□□ -1.74
COL3A1-205ENST00000470167 IGLL1P15814 213 aa4.19□□□□□ -1.74
COL3A1-205ENST00000470167 PSMB8P28062 276 aa4.19□□□□□ -1.74
COL3A1-205ENST00000470167 ATP5G3P48201 142 aa4.19□□□□□ -1.74
COL3A1-205ENST00000470167 RND3P61587 244 aa4.19□□□□□ -1.74
COL3A1-205ENST00000470167 RPS24P62847 133 aaKnown RBP4.19□□□□□ -1.74
COL3A1-205ENST00000470167 ZNF85Q03923 595 aa4.19□□□□□ -1.74
COL3A1-205ENST00000470167 SSBP1Q04837 148 aaKnown RBP4.19□□□□□ -1.74
COL3A1-205ENST00000470167 LOXL1Q08397 574 aaPredicted RBP4.19□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 84.2 ms