RNA–Protein interactions for RNA: ENST00000470083.5

LSM2-209, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM2, Length 641 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-209ENST00000470083 KCNK15Q9H427 330 aa8.6□□□□□ -1.03
LSM2-209ENST00000470083 FGF20Q9NP95 211 aaPredicted RBP8.6□□□□□ -1.03
LSM2-209ENST00000470083 THYN1Q9P016 225 aa8.6□□□□□ -1.03
LSM2-209ENST00000470083 HSF4Q9ULV5 492 aa8.6□□□□□ -1.03
LSM2-209ENST00000470083 RBM7Q9Y580 266 aaKnown RBP8.6□□□□□ -1.03
LSM2-209ENST00000470083 AP4S1Q9Y587 144 aa8.6□□□□□ -1.03
LSM2-209ENST00000470083 ORC6Q9Y5N6 252 aa8.6□□□□□ -1.03
LSM2-209ENST00000470083 IGKV3-7A0A075B6H7 116 aa8.59□□□□□ -1.03
LSM2-209ENST00000470083 SAC3D1A6NKF1 404 aa8.59□□□□□ -1.03
LSM2-209ENST00000470083 CHEK1O14757 476 aa8.59□□□□□ -1.03
LSM2-209ENST00000470083 DFFBO76075 338 aa8.59□□□□□ -1.03
LSM2-209ENST00000470083 NPY1RP25929 384 aa8.59□□□□□ -1.03
LSM2-209ENST00000470083 DCKP27707 260 aa8.59□□□□□ -1.03
LSM2-209ENST00000470083 C1orf100Q5SVJ3 147 aa8.59□□□□□ -1.03
LSM2-209ENST00000470083 LEMD1Q68G75 181 aa8.59□□□□□ -1.03
LSM2-209ENST00000470083 MORN3Q6PF18 240 aaPredicted RBP8.59□□□□□ -1.03
LSM2-209ENST00000470083 STHQ8IWL8 128 aa8.59□□□□□ -1.03
LSM2-209ENST00000470083 PUSL1Q8N0Z8 303 aaKnown RBP8.59□□□□□ -1.03
LSM2-209ENST00000470083 ZFP41Q8N8Y5 198 aa8.59□□□□□ -1.03
LSM2-209ENST00000470083 CMSS1Q9BQ75 279 aaKnown RBP8.59□□□□□ -1.03
LSM2-209ENST00000470083 RHPN1-AS1Q9BWJ2 59 aa8.59□□□□□ -1.03
LSM2-209ENST00000470083 LPAR5Q9H1C0 372 aa8.59□□□□□ -1.03
LSM2-209ENST00000470083 SMPD3Q9NY59 655 aaPredicted RBP8.59□□□□□ -1.03
LSM2-209ENST00000470083 MRPS7Q9Y2R9 242 aaKnown RBP8.59□□□□□ -1.03
LSM2-209ENST00000470083 IGHV7-4-1A0A0J9YVY3 117 aa8.58□□□□□ -1.04
LSM2-209ENST00000470083 FOXI3A8MTJ6 420 aaPredicted RBP8.58□□□□□ -1.04
LSM2-209ENST00000470083 GYG2O15488 501 aa8.58□□□□□ -1.04
LSM2-209ENST00000470083 SPP1P10451 314 aa8.58□□□□□ -1.04
LSM2-209ENST00000470083 RPL8P62917 257 aaKnown RBP8.58□□□□□ -1.04
LSM2-209ENST00000470083 ZIK1Q3SY52 487 aaPredicted RBP8.58□□□□□ -1.04
LSM2-209ENST00000470083 FAM90A2PQ658T7 463 aa8.58□□□□□ -1.04
LSM2-209ENST00000470083 KCTD9Q7L273 389 aa8.58□□□□□ -1.04
LSM2-209ENST00000470083 SPATA12Q7Z6I5 190 aa8.58□□□□□ -1.04
LSM2-209ENST00000470083 GBGT1Q8N5D6 347 aa8.58□□□□□ -1.04
LSM2-209ENST00000470083 FAM89BQ8N5H3 189 aa8.58□□□□□ -1.04
LSM2-209ENST00000470083 CMTM3Q96MX0 182 aa8.58□□□□□ -1.04
LSM2-209ENST00000470083 ATP6V0BQ99437 205 aa8.58□□□□□ -1.04
LSM2-209ENST00000470083 TBC1D24Q9ULP9 559 aa8.58□□□□□ -1.04
LSM2-209ENST00000470083 PRELID3BQ9Y3B1 194 aa8.58□□□□□ -1.04
LSM2-209ENST00000470083 FLG2Q5D862 2391 aaPredicted RBP8.58□□□□□ -1.04
LSM2-209ENST00000470083 VPS13BQ7Z7G8 4022 aa8.58□□□□□ -1.04
LSM2-209ENST00000470083 CGB1A6NKQ9 187 aa8.57□□□□□ -1.04
LSM2-209ENST00000470083 BPNT1O95861 308 aa8.57□□□□□ -1.04
LSM2-209ENST00000470083 HLA-GP17693 338 aa8.57□□□□□ -1.04
LSM2-209ENST00000470083 C4BPBP20851 252 aa8.57□□□□□ -1.04
LSM2-209ENST00000470083 MAPK3P27361 379 aaPredicted RBP8.57□□□□□ -1.04
LSM2-209ENST00000470083 TMEM50BP56557 158 aa8.57□□□□□ -1.04
LSM2-209ENST00000470083 DEFB131AP59861 70 aa8.57□□□□□ -1.04
LSM2-209ENST00000470083 PAFAH1B2P68402 229 aa8.57□□□□□ -1.04
LSM2-209ENST00000470083 OR2B11Q5JQS5 317 aa8.57□□□□□ -1.04
LSM2-209ENST00000470083 TRPT1Q86TN4 253 aaKnown RBP8.57□□□□□ -1.04
LSM2-209ENST00000470083 C6orf223Q8N319 242 aa8.57□□□□□ -1.04
LSM2-209ENST00000470083 TMEM116Q8NCL8 245 aa8.57□□□□□ -1.04
LSM2-209ENST00000470083 OR4S2Q8NH73 311 aa8.57□□□□□ -1.04
LSM2-209ENST00000470083 GIMAP1Q8WWP7 306 aa8.57□□□□□ -1.04
LSM2-209ENST00000470083 ARHGAP5-AS1Q96IT6 56 aa8.57□□□□□ -1.04
LSM2-209ENST00000470083 URM1Q9BTM9 101 aaKnown RBP8.57□□□□□ -1.04
LSM2-209ENST00000470083 RNF167Q9H6Y7 350 aa8.57□□□□□ -1.04
LSM2-209ENST00000470083 TMEM14BQ9NUH8 114 aa8.57□□□□□ -1.04
LSM2-209ENST00000470083 IGLC7A0M8Q6 106 aa8.56□□□□□ -1.04
LSM2-209ENST00000470083 EI24O14681 340 aa8.56□□□□□ -1.04
LSM2-209ENST00000470083 MYL12AP19105 171 aa8.56□□□□□ -1.04
LSM2-209ENST00000470083 CRHBPP24387 322 aa8.56□□□□□ -1.04
LSM2-209ENST00000470083 FAM3BP58499 235 aaPredicted RBP8.56□□□□□ -1.04
LSM2-209ENST00000470083 SSX1Q16384 188 aa8.56□□□□□ -1.04
LSM2-209ENST00000470083 ZNF485Q8NCK3 441 aa8.56□□□□□ -1.04
LSM2-209ENST00000470083 APH1BQ8WW43 257 aa8.56□□□□□ -1.04
LSM2-209ENST00000470083 GINS4Q9BRT9 223 aa8.56□□□□□ -1.04
LSM2-209ENST00000470083 PECRQ9BY49 303 aa8.56□□□□□ -1.04
LSM2-209ENST00000470083 CLEC2DQ9UHP7 191 aa8.56□□□□□ -1.04
LSM2-209ENST00000470083 AGRNO00468 2067 aa8.56□□□□□ -1.04
LSM2-209ENST00000470083 HMCN2Q8NDA2 5059 aa8.56□□□□□ -1.04
LSM2-209ENST00000470083 IGHV3-49A0A0A0MS15 119 aa8.55□□□□□ -1.04
LSM2-209ENST00000470083 PNMA8CA0A1B0GUJ8 204 aa8.55□□□□□ -1.04
LSM2-209ENST00000470083 F8W735 103 aaPredicted RBP8.55□□□□□ -1.04
LSM2-209ENST00000470083 CYB5BO43169 146 aa8.55□□□□□ -1.04
LSM2-209ENST00000470083 CD5P06127 495 aa8.55□□□□□ -1.04
LSM2-209ENST00000470083 CDK1P06493 297 aa8.55□□□□□ -1.04
LSM2-209ENST00000470083 OR2B8PP59922 312 aa8.55□□□□□ -1.04
LSM2-209ENST00000470083 RPL30P62888 115 aaKnown RBP8.55□□□□□ -1.04
LSM2-209ENST00000470083 GNGT1P63211 74 aa8.55□□□□□ -1.04
LSM2-209ENST00000470083 LRRTM1Q86UE6 522 aa8.55□□□□□ -1.04
LSM2-209ENST00000470083 H1FOOQ8IZA3 346 aaPredicted RBP8.55□□□□□ -1.04
LSM2-209ENST00000470083 CSNK1G2-AS1Q8NCQ2 148 aa8.55□□□□□ -1.04
LSM2-209ENST00000470083 OR10C1Q96KK4 312 aa8.55□□□□□ -1.04
LSM2-209ENST00000470083 SRSF8Q9BRL6 282 aaKnown RBP8.55□□□□□ -1.04
LSM2-209ENST00000470083 C21orf62Q9NYP8 219 aa8.55□□□□□ -1.04
LSM2-209ENST00000470083 DIMT1Q9UNQ2 313 aaKnown RBP8.55□□□□□ -1.04
LSM2-209ENST00000470083 TRAV2A0A0B4J234 112 aa8.54□□□□□ -1.04
LSM2-209ENST00000470083 RAB27BO00194 218 aa8.54□□□□□ -1.04
LSM2-209ENST00000470083 FCGR3AP08637 254 aa8.54□□□□□ -1.04
LSM2-209ENST00000470083 CD36P16671 472 aa8.54□□□□□ -1.04
LSM2-209ENST00000470083 SMCPP49901 116 aaPredicted RBP8.54□□□□□ -1.04
LSM2-209ENST00000470083 TAS2R43P59537 309 aa8.54□□□□□ -1.04
LSM2-209ENST00000470083 MRPS15P82914 257 aaKnown RBP8.54□□□□□ -1.04
LSM2-209ENST00000470083 PLA2G7Q13093 441 aa8.54□□□□□ -1.04
LSM2-209ENST00000470083 SMN1Q16637 294 aaKnown RBP8.54□□□□□ -1.04
LSM2-209ENST00000470083 PLAC9Q5JTB6 97 aa8.54□□□□□ -1.04
LSM2-209ENST00000470083 ZNF66Q6ZN08 573 aa8.54□□□□□ -1.04
LSM2-209ENST00000470083 TCF24Q7RTU0 167 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 132.2 ms