RNA–Protein interactions for RNA: ENST00000470006.1

NCKIPSD-209, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 2

Gene NCKIPSD, Length 814 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-209ENST00000470006 TMEM187Q14656 261 aa13.87□□□□□ -0.19
NCKIPSD-209ENST00000470006 TCTEX1D2Q8WW35 142 aa13.87□□□□□ -0.19
NCKIPSD-209ENST00000470006 AK6Q9Y3D8 172 aaKnown RBP13.87□□□□□ -0.19
NCKIPSD-209ENST00000470006 IGKV3-7A0A075B6H7 116 aa13.86□□□□□ -0.19
NCKIPSD-209ENST00000470006 IGHV4-4A0A075B6R2 117 aa13.86□□□□□ -0.19
NCKIPSD-209ENST00000470006 RPL30P62888 115 aaKnown RBP13.86□□□□□ -0.19
NCKIPSD-209ENST00000470006 C2orf76Q3KRA6 126 aa13.86□□□□□ -0.19
NCKIPSD-209ENST00000470006 AHSA2Q719I0 299 aa13.86□□□□□ -0.19
NCKIPSD-209ENST00000470006 PUSL1Q8N0Z8 303 aaKnown RBP13.86□□□□□ -0.19
NCKIPSD-209ENST00000470006 NANOGP1Q8N7R0 232 aa13.86□□□□□ -0.19
NCKIPSD-209ENST00000470006 CENPOQ9BU64 300 aa13.86□□□□□ -0.19
NCKIPSD-209ENST00000470006 KCNK7Q9Y2U2 307 aa13.86□□□□□ -0.19
NCKIPSD-209ENST00000470006 DYNC1H1Q14204 4646 aaKnown RBP13.86□□□□□ -0.19
NCKIPSD-209ENST00000470006 CD37P11049 281 aa13.85□□□□□ -0.19
NCKIPSD-209ENST00000470006 GNB3P16520 340 aa13.85□□□□□ -0.19
NCKIPSD-209ENST00000470006 HLA-GP17693 338 aa13.85□□□□□ -0.19
NCKIPSD-209ENST00000470006 PTBP1P26599 531 aaKnown RBP eCLIP13.85□□□□□ -0.19
NCKIPSD-209ENST00000470006 KLK9Q2XQG4 91 aa13.85□□□□□ -0.19
NCKIPSD-209ENST00000470006 FAM3DQ96BQ1 224 aa13.85□□□□□ -0.19
NCKIPSD-209ENST00000470006 HRASLSQ9HDD0 168 aa13.85□□□□□ -0.19
NCKIPSD-209ENST00000470006 KLK9Q9UKQ9 250 aa13.85□□□□□ -0.19
NCKIPSD-209ENST00000470006 SPATA2Q9UM82 520 aa13.85□□□□□ -0.19
NCKIPSD-209ENST00000470006 RBMX2Q9Y388 322 aaKnown RBP13.85□□□□□ -0.19
NCKIPSD-209ENST00000470006 TRAV10A0A0B4J240 114 aa13.84□□□□□ -0.19
NCKIPSD-209ENST00000470006 RTL8CO15255 209 aa13.84□□□□□ -0.19
NCKIPSD-209ENST00000470006 CYB5BO43169 146 aa13.84□□□□□ -0.19
NCKIPSD-209ENST00000470006 MRPS14O60783 128 aaKnown RBP13.84□□□□□ -0.19
NCKIPSD-209ENST00000470006 HRASP01112 189 aa13.84□□□□□ -0.19
NCKIPSD-209ENST00000470006 UCHL1P09936 223 aa13.84□□□□□ -0.19
NCKIPSD-209ENST00000470006 GADD45AP24522 165 aa13.84□□□□□ -0.19
NCKIPSD-209ENST00000470006 HLA-DMBP28068 263 aa13.84□□□□□ -0.19
NCKIPSD-209ENST00000470006 C10orf67Q8IYJ2 551 aa13.84□□□□□ -0.19
NCKIPSD-209ENST00000470006 DNAH11Q96DT5 4516 aa13.84□□□□□ -0.19
NCKIPSD-209ENST00000470006 TMEM203Q969S6 136 aa13.83□□□□□ -0.2
NCKIPSD-209ENST00000470006 GFI1Q99684 422 aa13.83□□□□□ -0.2
NCKIPSD-209ENST00000470006 HSD17B10Q99714 261 aaKnown RBP13.83□□□□□ -0.2
NCKIPSD-209ENST00000470006 RAB22AQ9UL26 194 aa13.83□□□□□ -0.2
NCKIPSD-209ENST00000470006 PKD1P98161 4303 aa13.83□□□□□ -0.2
NCKIPSD-209ENST00000470006 TMEM272A0A1B0GTI8 110 aa13.82□□□□□ -0.2
NCKIPSD-209ENST00000470006 NDUFA4O00483 81 aa13.82□□□□□ -0.2
NCKIPSD-209ENST00000470006 SLC22A5O76082 557 aa13.82□□□□□ -0.2
NCKIPSD-209ENST00000470006 NFYAP23511 347 aaPredicted RBP13.82□□□□□ -0.2
NCKIPSD-209ENST00000470006 PLA2G7Q13093 441 aa13.82□□□□□ -0.2
NCKIPSD-209ENST00000470006 PVRIGQ6DKI7 326 aa13.82□□□□□ -0.2
NCKIPSD-209ENST00000470006 Q6ZTC4 211 aa13.82□□□□□ -0.2
NCKIPSD-209ENST00000470006 ZNF575Q86XF7 245 aa13.82□□□□□ -0.2
NCKIPSD-209ENST00000470006 GBGT1Q8N5D6 347 aa13.82□□□□□ -0.2
NCKIPSD-209ENST00000470006 POM121L12Q8N7R1 296 aa13.82□□□□□ -0.2
NCKIPSD-209ENST00000470006 UBAC2Q8NBM4 344 aa13.82□□□□□ -0.2
NCKIPSD-209ENST00000470006 VN1R17PQ8TDU5 208 aa13.82□□□□□ -0.2
NCKIPSD-209ENST00000470006 BSCL2Q96G97 398 aaPredicted RBP13.82□□□□□ -0.2
NCKIPSD-209ENST00000470006 CMTM3Q96MX0 182 aa13.82□□□□□ -0.2
NCKIPSD-209ENST00000470006 RNF2Q99496 336 aa13.82□□□□□ -0.2
NCKIPSD-209ENST00000470006 HRH4Q9H3N8 390 aa13.82□□□□□ -0.2
NCKIPSD-209ENST00000470006 TAS2R8Q9NYW2 309 aa13.82□□□□□ -0.2
NCKIPSD-209ENST00000470006 PSORS1C1Q9UIG5 152 aa13.82□□□□□ -0.2
NCKIPSD-209ENST00000470006 OR2W1Q9Y3N9 320 aa13.82□□□□□ -0.2
NCKIPSD-209ENST00000470006 IGHV3-21A0A0B4J1V1 117 aa13.81□□□□□ -0.2
NCKIPSD-209ENST00000470006 CGB1A6NKQ9 187 aa13.81□□□□□ -0.2
NCKIPSD-209ENST00000470006 K7EMT4 169 aa13.81□□□□□ -0.2
NCKIPSD-209ENST00000470006 RANBP1P43487 201 aa13.81□□□□□ -0.2
NCKIPSD-209ENST00000470006 SLC25A24Q6NUK1 477 aa13.81□□□□□ -0.2
NCKIPSD-209ENST00000470006 PQLC1Q8N2U9 271 aa13.81□□□□□ -0.2
NCKIPSD-209ENST00000470006 BPIFB6Q8NFQ5 453 aa13.81□□□□□ -0.2
NCKIPSD-209ENST00000470006 OR10R2Q8NGX6 335 aa13.81□□□□□ -0.2
NCKIPSD-209ENST00000470006 MND1Q9BWT6 205 aa13.81□□□□□ -0.2
NCKIPSD-209ENST00000470006 IGKV1D-8A0A087WSZ0 117 aa13.8□□□□□ -0.2
NCKIPSD-209ENST00000470006 IGHV3-49A0A0A0MS15 119 aa13.8□□□□□ -0.2
NCKIPSD-209ENST00000470006 ERICH4A6NGS2 130 aa13.8□□□□□ -0.2
NCKIPSD-209ENST00000470006 P0DMU3 169 aa13.8□□□□□ -0.2
NCKIPSD-209ENST00000470006 FAM231AP0DMU4 169 aa13.8□□□□□ -0.2
NCKIPSD-209ENST00000470006 FAM231CP0DMU5 169 aa13.8□□□□□ -0.2
NCKIPSD-209ENST00000470006 OR2B8PP59922 312 aa13.8□□□□□ -0.2
NCKIPSD-209ENST00000470006 SSX1Q16384 188 aa13.8□□□□□ -0.2
NCKIPSD-209ENST00000470006 HES5Q5TA89 166 aa13.8□□□□□ -0.2
NCKIPSD-209ENST00000470006 SPSB3Q6PJ21 355 aa13.8□□□□□ -0.2
NCKIPSD-209ENST00000470006 MFSD4AQ8N468 514 aa13.8□□□□□ -0.2
NCKIPSD-209ENST00000470006 CHRDL1Q9BU40 450 aa13.8□□□□□ -0.2
NCKIPSD-209ENST00000470006 RHPN1-AS1Q9BWJ2 59 aa13.8□□□□□ -0.2
NCKIPSD-209ENST00000470006 COMMD5Q9GZQ3 224 aa13.8□□□□□ -0.2
NCKIPSD-209ENST00000470006 S100A14Q9HCY8 104 aa13.8□□□□□ -0.2
NCKIPSD-209ENST00000470006 SMPXQ9UHP9 88 aa13.8□□□□□ -0.2
NCKIPSD-209ENST00000470006 IGHV4-28A0A0C4DH34 117 aa13.79□□□□□ -0.2
NCKIPSD-209ENST00000470006 HLA-DQB1P01920 261 aa13.79□□□□□ -0.2
NCKIPSD-209ENST00000470006 PAFAH1B2P68402 229 aa13.79□□□□□ -0.2
NCKIPSD-209ENST00000470006 Q56UQ5 140 aa13.79□□□□□ -0.2
NCKIPSD-209ENST00000470006 Q8NAQ8 132 aa13.79□□□□□ -0.2
NCKIPSD-209ENST00000470006 TMEM116Q8NCL8 245 aa13.79□□□□□ -0.2
NCKIPSD-209ENST00000470006 GPHA2Q96T91 129 aa13.79□□□□□ -0.2
NCKIPSD-209ENST00000470006 AIFM2Q9BRQ8 373 aa13.79□□□□□ -0.2
NCKIPSD-209ENST00000470006 RNF126Q9BV68 326 aa13.79□□□□□ -0.2
NCKIPSD-209ENST00000470006 BET1LQ9NYM9 111 aa13.79□□□□□ -0.2
NCKIPSD-209ENST00000470006 ETV7Q9Y603 341 aa13.79□□□□□ -0.2
NCKIPSD-209ENST00000470006 IGKV1D-13A0A0B4J2D9 117 aa13.78□□□□□ -0.2
NCKIPSD-209ENST00000470006 IGLC7A0M8Q6 106 aa13.78□□□□□ -0.2
NCKIPSD-209ENST00000470006 C15orf62A8K5M9 175 aa13.78□□□□□ -0.2
NCKIPSD-209ENST00000470006 MFNGO00587 321 aa13.78□□□□□ -0.2
NCKIPSD-209ENST00000470006 YIF1AO95070 293 aa13.78□□□□□ -0.2
NCKIPSD-209ENST00000470006 IGLV2-14P01704 120 aa13.78□□□□□ -0.2
NCKIPSD-209ENST00000470006 RBMY1A1P0DJD3 496 aaKnown RBP13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms