RNA–Protein interactions for RNA: ENST00000469717.5

TPM3-215, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 4,041 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-215ENST00000469717 DEFB109BQ30KR1 87 aa6.65□□□□□ -1.35
TPM3-215ENST00000469717 WDR74Q6RFH5 385 aaPredicted RBP6.65□□□□□ -1.35
TPM3-215ENST00000469717 OR2D3Q8NGH3 330 aa6.65□□□□□ -1.35
TPM3-215ENST00000469717 ORAOV1Q8WV07 137 aa6.65□□□□□ -1.35
TPM3-215ENST00000469717 SSMEM1Q8WWF3 244 aa6.65□□□□□ -1.35
TPM3-215ENST00000469717 ZNF48Q96MX3 618 aaPredicted RBP6.65□□□□□ -1.35
TPM3-215ENST00000469717 FAM166BA8MTA8 275 aa6.64□□□□□ -1.35
TPM3-215ENST00000469717 ZNF253O75346 499 aa6.64□□□□□ -1.35
TPM3-215ENST00000469717 MIC13Q5XKP0 118 aa6.64□□□□□ -1.35
TPM3-215ENST00000469717 IGF2-ASQ6U949 168 aa6.64□□□□□ -1.35
TPM3-215ENST00000469717 Q6ZS49 121 aa6.64□□□□□ -1.35
TPM3-215ENST00000469717 MMD2Q8IY49 270 aa6.64□□□□□ -1.35
TPM3-215ENST00000469717 FADS6Q8N9I5 356 aa6.64□□□□□ -1.35
TPM3-215ENST00000469717 ABHD3Q8WU67 409 aa6.64□□□□□ -1.35
TPM3-215ENST00000469717 NEUROG1Q92886 237 aa6.64□□□□□ -1.35
TPM3-215ENST00000469717 DLL3Q9NYJ7 618 aa6.64□□□□□ -1.35
TPM3-215ENST00000469717 TET2Q6N021 2002 aaPredicted RBP6.64□□□□□ -1.35
TPM3-215ENST00000469717 FASNP49327 2511 aaKnown RBP6.64□□□□□ -1.35
TPM3-215ENST00000469717 IGHV2OR16-5A0A0B4J2B6 119 aa6.64□□□□□ -1.35
TPM3-215ENST00000469717 A0A1W2PPV4 95 aa6.64□□□□□ -1.35
TPM3-215ENST00000469717 DPRXA6NFQ7 191 aa6.64□□□□□ -1.35
TPM3-215ENST00000469717 C17orf98A8MV24 154 aa6.64□□□□□ -1.35
TPM3-215ENST00000469717 FOXH1O75593 365 aa6.64□□□□□ -1.35
TPM3-215ENST00000469717 LGALS4P56470 323 aa6.64□□□□□ -1.35
TPM3-215ENST00000469717 CLDN15P56746 228 aa6.64□□□□□ -1.35
TPM3-215ENST00000469717 BRWD1-AS2P59051 145 aa6.64□□□□□ -1.35
TPM3-215ENST00000469717 VAMP3Q15836 100 aa6.64□□□□□ -1.35
TPM3-215ENST00000469717 SPATA12Q7Z6I5 190 aa6.64□□□□□ -1.35
TPM3-215ENST00000469717 KIR3DL3Q8N743 410 aa6.64□□□□□ -1.35
TPM3-215ENST00000469717 CLEC7AQ9BXN2 247 aa6.64□□□□□ -1.35
TPM3-215ENST00000469717 ZNF71Q9NQZ8 489 aaPredicted RBP6.64□□□□□ -1.35
TPM3-215ENST00000469717 TIMM9Q9Y5J7 89 aa6.64□□□□□ -1.35
TPM3-215ENST00000469717 IGLV3-32A0A0A0MS00 114 aa6.64□□□□□ -1.35
TPM3-215ENST00000469717 C5orf49A4QMS7 147 aa6.64□□□□□ -1.35
TPM3-215ENST00000469717 CXCL13O43927 109 aa6.64□□□□□ -1.35
TPM3-215ENST00000469717 ZFAND5O76080 213 aa6.64□□□□□ -1.35
TPM3-215ENST00000469717 ESDP10768 282 aa6.64□□□□□ -1.35
TPM3-215ENST00000469717 PSG1P11464 419 aa6.64□□□□□ -1.35
TPM3-215ENST00000469717 RPL19P84098 196 aaKnown RBP6.64□□□□□ -1.35
TPM3-215ENST00000469717 Q56UQ5 140 aa6.64□□□□□ -1.35
TPM3-215ENST00000469717 ZNF738Q8NE65 137 aa6.64□□□□□ -1.35
TPM3-215ENST00000469717 PILRBQ9UKJ0 227 aa6.64□□□□□ -1.35
TPM3-215ENST00000469717 ABCA1O95477 2261 aa6.64□□□□□ -1.35
TPM3-215ENST00000469717 K7ESF4 209 aa6.63□□□□□ -1.35
TPM3-215ENST00000469717 CD99P14209 185 aa6.63□□□□□ -1.35
TPM3-215ENST00000469717 SLAQ13239 276 aa6.63□□□□□ -1.35
TPM3-215ENST00000469717 SPATA46Q5T0L3 261 aa6.63□□□□□ -1.35
TPM3-215ENST00000469717 C6orf15Q6UXA7 325 aaPredicted RBP6.63□□□□□ -1.35
TPM3-215ENST00000469717 AAED1Q7RTV5 226 aa6.63□□□□□ -1.35
TPM3-215ENST00000469717 MKXQ8IYA7 352 aa6.63□□□□□ -1.35
TPM3-215ENST00000469717 PROK2Q9HC23 129 aa6.63□□□□□ -1.35
TPM3-215ENST00000469717 IL36BQ9NZH7 164 aa6.63□□□□□ -1.35
TPM3-215ENST00000469717 CCDC168Q8NDH2 2452 aa6.63□□□□□ -1.35
TPM3-215ENST00000469717 DYSFO75923 2080 aa6.63□□□□□ -1.35
TPM3-215ENST00000469717 PDE6DO43924 150 aa6.63□□□□□ -1.35
TPM3-215ENST00000469717 GFRA3O60609 400 aa6.63□□□□□ -1.35
TPM3-215ENST00000469717 CA2P00918 260 aa6.63□□□□□ -1.35
TPM3-215ENST00000469717 GDF1P27539 372 aa6.63□□□□□ -1.35
TPM3-215ENST00000469717 NHLRC2Q8NBF2 726 aa6.63□□□□□ -1.35
TPM3-215ENST00000469717 OR2D2Q9H210 308 aa6.63□□□□□ -1.35
TPM3-215ENST00000469717 PLSCR4Q9NRQ2 329 aa6.63□□□□□ -1.35
TPM3-215ENST00000469717 HSPB7Q9UBY9 170 aa6.63□□□□□ -1.35
TPM3-215ENST00000469717 TRAPPC2LQ9UL33 140 aa6.63□□□□□ -1.35
TPM3-215ENST00000469717 CREBBPQ92793 2442 aa6.63□□□□□ -1.35
TPM3-215ENST00000469717 TOMM40O96008 361 aa6.63□□□□□ -1.35
TPM3-215ENST00000469717 RPS19BP1Q86WX3 136 aaKnown RBP6.63□□□□□ -1.35
TPM3-215ENST00000469717 MCRIP2Q9BUT9 160 aaKnown RBP6.63□□□□□ -1.35
TPM3-215ENST00000469717 KMT2EQ8IZD2 1858 aa6.63□□□□□ -1.35
TPM3-215ENST00000469717 DOPEY2Q9Y3R5 2298 aa6.63□□□□□ -1.35
TPM3-215ENST00000469717 IGHV2-70DA0A0C4DH43 119 aa6.62□□□□□ -1.35
TPM3-215ENST00000469717 A0A1W2PQM1 296 aa6.62□□□□□ -1.35
TPM3-215ENST00000469717 OR2T8A6NH00 312 aa6.62□□□□□ -1.35
TPM3-215ENST00000469717 SH2D7A6NKC9 451 aaPredicted RBP6.62□□□□□ -1.35
TPM3-215ENST00000469717 LRRC30A6NM36 301 aa6.62□□□□□ -1.35
TPM3-215ENST00000469717 DKK1O94907 266 aa6.62□□□□□ -1.35
TPM3-215ENST00000469717 IGLL1P15814 213 aa6.62□□□□□ -1.35
TPM3-215ENST00000469717 VKORC1L1Q8N0U8 176 aa6.62□□□□□ -1.35
TPM3-215ENST00000469717 KCNIP2Q9NS61 270 aa6.62□□□□□ -1.35
TPM3-215ENST00000469717 LIN7CQ9NUP9 197 aaKnown RBP6.62□□□□□ -1.35
TPM3-215ENST00000469717 BOD1L1Q8NFC6 3051 aa6.62□□□□□ -1.35
TPM3-215ENST00000469717 IGHV3-43A0A0B4J1X8 118 aa6.62□□□□□ -1.35
TPM3-215ENST00000469717 IGHV5-10-1A0A0J9YXX1 117 aa6.62□□□□□ -1.35
TPM3-215ENST00000469717 BMPR1BO00238 502 aa6.62□□□□□ -1.35
TPM3-215ENST00000469717 ZNF324O75467 553 aaPredicted RBP6.62□□□□□ -1.35
TPM3-215ENST00000469717 SYNGR4O95473 234 aa6.62□□□□□ -1.35
TPM3-215ENST00000469717 IGHV3-13P01766 116 aa6.62□□□□□ -1.35
TPM3-215ENST00000469717 IGHV3-7P01780 117 aa6.62□□□□□ -1.35
TPM3-215ENST00000469717 IGHV3-43DP0DP04 118 aa6.62□□□□□ -1.35
TPM3-215ENST00000469717 PMCHL1Q16048 86 aa6.62□□□□□ -1.35
TPM3-215ENST00000469717 MPV17L2Q567V2 206 aa6.62□□□□□ -1.35
TPM3-215ENST00000469717 PRSS57Q6UWY2 283 aa6.62□□□□□ -1.35
TPM3-215ENST00000469717 OR4F17Q8NGA8 305 aa6.62□□□□□ -1.35
TPM3-215ENST00000469717 SMIM12Q96EX1 92 aa6.62□□□□□ -1.35
TPM3-215ENST00000469717 KCNS1Q96KK3 526 aa6.62□□□□□ -1.35
TPM3-215ENST00000469717 FAM234AQ9H0X4 552 aa6.62□□□□□ -1.35
TPM3-215ENST00000469717 SLC35D1Q9NTN3 355 aa6.62□□□□□ -1.35
TPM3-215ENST00000469717 V9GYV3 84 aa6.62□□□□□ -1.35
TPM3-215ENST00000469717 C15orf62A8K5M9 175 aa6.62□□□□□ -1.35
TPM3-215ENST00000469717 DEFB108AA8MXU0 73 aa6.62□□□□□ -1.35
TPM3-215ENST00000469717 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms