RNA–Protein interactions for RNA: ENST00000469550.6

HDAC3-205, Transcript of histone deacetylase 3, humanhuman

TSL 1 (best)

Gene HDAC3, Length 1,952 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-205ENST00000469550 DTD1Q8TEA8 209 aa7.97□□□□□ -1.13
HDAC3-205ENST00000469550 FAM173AQ9BQD7 235 aa7.97□□□□□ -1.13
HDAC3-205ENST00000469550 TMEM204Q9BSN7 226 aa7.97□□□□□ -1.13
HDAC3-205ENST00000469550 VAMP8Q9BV40 100 aa7.97□□□□□ -1.13
HDAC3-205ENST00000469550 AURKAIP1Q9NWT8 199 aaPredicted RBP7.97□□□□□ -1.13
HDAC3-205ENST00000469550 CLN8Q9UBY8 286 aa7.97□□□□□ -1.13
HDAC3-205ENST00000469550 TRAPPC2LQ9UL33 140 aa7.97□□□□□ -1.13
HDAC3-205ENST00000469550 ZFP30Q9Y2G7 519 aa7.97□□□□□ -1.13
HDAC3-205ENST00000469550 LY96Q9Y6Y9 160 aa7.97□□□□□ -1.13
HDAC3-205ENST00000469550 ADGRG4Q8IZF6 3080 aa7.97□□□□□ -1.13
HDAC3-205ENST00000469550 CSMD2Q7Z408 3487 aa7.96□□□□□ -1.13
HDAC3-205ENST00000469550 ARHGAP21Q5T5U3 1957 aa7.96□□□□□ -1.14
HDAC3-205ENST00000469550 A0A1B0GUS0 222 aa7.96□□□□□ -1.14
HDAC3-205ENST00000469550 ODAMA1E959 279 aa7.96□□□□□ -1.14
HDAC3-205ENST00000469550 C5orf49A4QMS7 147 aa7.96□□□□□ -1.14
HDAC3-205ENST00000469550 FAM90A27PA6NNH2 459 aa7.96□□□□□ -1.14
HDAC3-205ENST00000469550 RBFOX2O43251 390 aaKnown RBP eCLIP7.96□□□□□ -1.14
HDAC3-205ENST00000469550 MRPL33O75394 65 aaKnown RBP7.96□□□□□ -1.14
HDAC3-205ENST00000469550 CRISP2P16562 243 aa7.96□□□□□ -1.14
HDAC3-205ENST00000469550 CATR1Q13166 79 aa7.96□□□□□ -1.14
HDAC3-205ENST00000469550 Q8IYB0 196 aa7.96□□□□□ -1.14
HDAC3-205ENST00000469550 RPRMLQ8N4K4 120 aa7.96□□□□□ -1.14
HDAC3-205ENST00000469550 WDR31Q8NA23 367 aa7.96□□□□□ -1.14
HDAC3-205ENST00000469550 OR4B1Q8NGF8 309 aa7.96□□□□□ -1.14
HDAC3-205ENST00000469550 ZNF488Q96MN9 340 aa7.96□□□□□ -1.14
HDAC3-205ENST00000469550 IL36BQ9NZH7 164 aa7.96□□□□□ -1.14
HDAC3-205ENST00000469550 KCNIP1Q9NZI2 227 aa7.96□□□□□ -1.14
HDAC3-205ENST00000469550 INTS1Q8N201 2190 aaKnown RBP7.96□□□□□ -1.14
HDAC3-205ENST00000469550 DNAJC13O75165 2243 aa7.96□□□□□ -1.14
HDAC3-205ENST00000469550 CELSR1Q9NYQ6 3014 aa7.95□□□□□ -1.14
HDAC3-205ENST00000469550 A0A0G2JMM0 328 aa7.95□□□□□ -1.14
HDAC3-205ENST00000469550 A0A1W2PPB8 328 aa7.95□□□□□ -1.14
HDAC3-205ENST00000469550 A0A1W2PRS3 328 aa7.95□□□□□ -1.14
HDAC3-205ENST00000469550 A6NNC1 897 aa7.95□□□□□ -1.14
HDAC3-205ENST00000469550 KIR3DP1A8MWS1 328 aa7.95□□□□□ -1.14
HDAC3-205ENST00000469550 P04436 131 aa7.95□□□□□ -1.14
HDAC3-205ENST00000469550 ARR3P36575 388 aa7.95□□□□□ -1.14
HDAC3-205ENST00000469550 ATP5G3P48201 142 aa7.95□□□□□ -1.14
HDAC3-205ENST00000469550 COMPP49747 757 aaPredicted RBP7.95□□□□□ -1.14
HDAC3-205ENST00000469550 PLGLB1Q02325 96 aa7.95□□□□□ -1.14
HDAC3-205ENST00000469550 TMEM251Q8N6I4 163 aa7.95□□□□□ -1.14
HDAC3-205ENST00000469550 ZNF114Q8NC26 417 aa7.95□□□□□ -1.14
HDAC3-205ENST00000469550 POM121L2Q96KW2 1035 aa7.95□□□□□ -1.14
HDAC3-205ENST00000469550 RNF2Q99496 336 aa7.95□□□□□ -1.14
HDAC3-205ENST00000469550 HSPB9Q9BQS6 159 aa7.95□□□□□ -1.14
HDAC3-205ENST00000469550 QTRT1Q9BXR0 403 aaKnown RBP7.95□□□□□ -1.14
HDAC3-205ENST00000469550 PRRG4Q9BZD6 226 aa7.95□□□□□ -1.14
HDAC3-205ENST00000469550 DEFB127Q9H1M4 99 aa7.95□□□□□ -1.14
HDAC3-205ENST00000469550 CXXC4Q9H2H0 198 aa7.95□□□□□ -1.14
HDAC3-205ENST00000469550 FAM215AQ9Y5M1 114 aa7.95□□□□□ -1.14
HDAC3-205ENST00000469550 TACC2O95359 2948 aa7.95□□□□□ -1.14
HDAC3-205ENST00000469550 TRBV20OR9-2A0A075B6H5 130 aa7.95□□□□□ -1.14
HDAC3-205ENST00000469550 SAA2-SAA4A0A096LPE2 208 aa7.95□□□□□ -1.14
HDAC3-205ENST00000469550 A0A1W2PPV4 95 aa7.95□□□□□ -1.14
HDAC3-205ENST00000469550 FAM166BA8MTA8 275 aa7.95□□□□□ -1.14
HDAC3-205ENST00000469550 SERF1AO75920 110 aa7.95□□□□□ -1.14
HDAC3-205ENST00000469550 CRYAAP02489 173 aa7.95□□□□□ -1.14
HDAC3-205ENST00000469550 STAG3L2P0CL84 134 aa7.95□□□□□ -1.14
HDAC3-205ENST00000469550 STAG3L3P0CL85 134 aa7.95□□□□□ -1.14
HDAC3-205ENST00000469550 CCNOP22674 350 aa7.95□□□□□ -1.14
HDAC3-205ENST00000469550 G6PCP35575 357 aa7.95□□□□□ -1.14
HDAC3-205ENST00000469550 OPRK1P41145 380 aa7.95□□□□□ -1.14
HDAC3-205ENST00000469550 ERVK11-1P61568 191 aa7.95□□□□□ -1.14
HDAC3-205ENST00000469550 ZNF90Q03938 601 aa7.95□□□□□ -1.14
HDAC3-205ENST00000469550 TDRG1Q3Y452 100 aa7.95□□□□□ -1.14
HDAC3-205ENST00000469550 COX19Q49B96 90 aa7.95□□□□□ -1.14
HDAC3-205ENST00000469550 ANKRD39Q53RE8 183 aa7.95□□□□□ -1.14
HDAC3-205ENST00000469550 TCF23Q7RTU1 214 aa7.95□□□□□ -1.14
HDAC3-205ENST00000469550 ABHD3Q8WU67 409 aa7.95□□□□□ -1.14
HDAC3-205ENST00000469550 NINJ1Q92982 152 aa7.95□□□□□ -1.14
HDAC3-205ENST00000469550 DERL1Q9BUN8 251 aa7.95□□□□□ -1.14
HDAC3-205ENST00000469550 MRPL18Q9H0U6 180 aaKnown RBP7.95□□□□□ -1.14
HDAC3-205ENST00000469550 PATZ1Q9HBE1 687 aaKnown RBP7.95□□□□□ -1.14
HDAC3-205ENST00000469550 MSL2Q9HCI7 577 aa7.95□□□□□ -1.14
HDAC3-205ENST00000469550 SLC45A2Q9UMX9 530 aa7.95□□□□□ -1.14
HDAC3-205ENST00000469550 A0A1W2PR80 420 aa7.94□□□□□ -1.14
HDAC3-205ENST00000469550 GRIFINA4D1Z8 144 aa7.94□□□□□ -1.14
HDAC3-205ENST00000469550 C9JCJ5 164 aa7.94□□□□□ -1.14
HDAC3-205ENST00000469550 RAMP3O60896 148 aa7.94□□□□□ -1.14
HDAC3-205ENST00000469550 OR2H2O95918 312 aa7.94□□□□□ -1.14
HDAC3-205ENST00000469550 CXorf1O96002 111 aa7.94□□□□□ -1.14
HDAC3-205ENST00000469550 NGFP01138 241 aa7.94□□□□□ -1.14
HDAC3-205ENST00000469550 REG1AP05451 166 aa7.94□□□□□ -1.14
HDAC3-205ENST00000469550 SELEP16581 610 aa7.94□□□□□ -1.14
HDAC3-205ENST00000469550 CD1BP29016 333 aa7.94□□□□□ -1.14
HDAC3-205ENST00000469550 MAGEA5P43359 124 aa7.94□□□□□ -1.14
HDAC3-205ENST00000469550 GFRA1P56159 465 aa7.94□□□□□ -1.14
HDAC3-205ENST00000469550 RPL19P84098 196 aaKnown RBP7.94□□□□□ -1.14
HDAC3-205ENST00000469550 ZNF146Q15072 292 aa7.94□□□□□ -1.14
HDAC3-205ENST00000469550 AARDQ4LEZ3 155 aa7.94□□□□□ -1.14
HDAC3-205ENST00000469550 PRR18Q8N4B5 295 aa7.94□□□□□ -1.14
HDAC3-205ENST00000469550 OCC1Q8TAD7 63 aa7.94□□□□□ -1.14
HDAC3-205ENST00000469550 SARAFQ96BY9 339 aa7.94□□□□□ -1.14
HDAC3-205ENST00000469550 OPN3Q9H1Y3 402 aaPredicted RBP7.94□□□□□ -1.14
HDAC3-205ENST00000469550 PAM16Q9Y3D7 125 aa7.94□□□□□ -1.14
HDAC3-205ENST00000469550 C15orf62A8K5M9 175 aa7.93□□□□□ -1.14
HDAC3-205ENST00000469550 A8MXE2 369 aa7.93□□□□□ -1.14
HDAC3-205ENST00000469550 RHBDL1O75783 438 aa7.93□□□□□ -1.14
HDAC3-205ENST00000469550 GPX1P07203 203 aa7.93□□□□□ -1.14
HDAC3-205ENST00000469550 CCL2P13500 99 aa7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms