RNA–Protein interactions for RNA: ENST00000468723.1

GPNMB-207, Transcript of glycoprotein nmb, humanhuman

TSL 2

Gene GPNMB, Length 808 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-207ENST00000468723 PMVKQ15126 192 aa2.53□□□□□ -2
GPNMB-207ENST00000468723 RBM48Q5RL73 367 aaKnown RBP2.53□□□□□ -2
GPNMB-207ENST00000468723 IDNKQ5T6J7 187 aa2.53□□□□□ -2
GPNMB-207ENST00000468723 C1orf140Q5VVS0 124 aa2.53□□□□□ -2
GPNMB-207ENST00000468723 PLEKHG7Q6ZR37 379 aa2.53□□□□□ -2
GPNMB-207ENST00000468723 SLC16A13Q7RTY0 426 aa2.53□□□□□ -2
GPNMB-207ENST00000468723 GRINAQ7Z429 371 aa2.53□□□□□ -2
GPNMB-207ENST00000468723 MSRB3Q8IXL7 192 aa2.53□□□□□ -2
GPNMB-207ENST00000468723 MKXQ8IYA7 352 aa2.53□□□□□ -2
GPNMB-207ENST00000468723 LRRC34Q8IZ02 419 aa2.53□□□□□ -2
GPNMB-207ENST00000468723 SPICQ8N5J4 248 aa2.53□□□□□ -2
GPNMB-207ENST00000468723 ZIC4Q8N9L1 334 aa2.53□□□□□ -2
GPNMB-207ENST00000468723 OR8J2Q8NGG1 315 aa2.53□□□□□ -2
GPNMB-207ENST00000468723 OR4D11Q8NGI4 311 aa2.53□□□□□ -2
GPNMB-207ENST00000468723 C22orf15Q8WYQ4 148 aa2.53□□□□□ -2
GPNMB-207ENST00000468723 TESCQ96BS2 214 aa2.53□□□□□ -2
GPNMB-207ENST00000468723 TLCD1Q96CP7 247 aa2.53□□□□□ -2
GPNMB-207ENST00000468723 ZHX1-C8orf76Q96EF9 292 aa2.53□□□□□ -2
GPNMB-207ENST00000468723 SMIM8Q96KF7 97 aa2.53□□□□□ -2
GPNMB-207ENST00000468723 CCDC115Q96NT0 180 aa2.53□□□□□ -2
GPNMB-207ENST00000468723 TMEM109Q9BVC6 243 aa2.53□□□□□ -2
GPNMB-207ENST00000468723 REG4Q9BYZ8 158 aa2.53□□□□□ -2
GPNMB-207ENST00000468723 MED29Q9NX70 200 aa2.53□□□□□ -2
GPNMB-207ENST00000468723 ANGPT4Q9Y264 503 aa2.53□□□□□ -2
GPNMB-207ENST00000468723 SLC35A3Q9Y2D2 325 aa2.53□□□□□ -2
GPNMB-207ENST00000468723 WSB1Q9Y6I7 421 aa2.53□□□□□ -2
GPNMB-207ENST00000468723 CADP27708 2225 aa2.53□□□□□ -2
GPNMB-207ENST00000468723 RTTNQ86VV8 2226 aa2.53□□□□□ -2
GPNMB-207ENST00000468723 ARHGAP32A7KAX9 2087 aa2.53□□□□□ -2.01
GPNMB-207ENST00000468723 SPG11Q96JI7 2443 aa2.52□□□□□ -2.01
GPNMB-207ENST00000468723 ABCA2Q9BZC7 2435 aa2.52□□□□□ -2.01
GPNMB-207ENST00000468723 IGHV1-18A0A0C4DH31 117 aa2.52□□□□□ -2.01
GPNMB-207ENST00000468723 A0A0G2JND7 137 aa2.52□□□□□ -2.01
GPNMB-207ENST00000468723 A0A1B0GWA3 101 aa2.52□□□□□ -2.01
GPNMB-207ENST00000468723 OR5H1A6NKK0 313 aa2.52□□□□□ -2.01
GPNMB-207ENST00000468723 J3QLI3 93 aa2.52□□□□□ -2.01
GPNMB-207ENST00000468723 SOCS1O15524 211 aa2.52□□□□□ -2.01
GPNMB-207ENST00000468723 CRXO43186 299 aaPredicted RBP2.52□□□□□ -2.01
GPNMB-207ENST00000468723 EIF1BO60739 113 aaKnown RBP2.52□□□□□ -2.01
GPNMB-207ENST00000468723 AHSA1O95433 338 aa2.52□□□□□ -2.01
GPNMB-207ENST00000468723 IGLV2-8P01709 118 aa2.52□□□□□ -2.01
GPNMB-207ENST00000468723 APCSP02743 223 aa2.52□□□□□ -2.01
GPNMB-207ENST00000468723 RLN2P04090 185 aa2.52□□□□□ -2.01
GPNMB-207ENST00000468723 TFPTP0C1Z6 253 aa2.52□□□□□ -2.01
GPNMB-207ENST00000468723 ZNF688P0C7X2 276 aa2.52□□□□□ -2.01
GPNMB-207ENST00000468723 IDO1P14902 403 aa2.52□□□□□ -2.01
GPNMB-207ENST00000468723 NQO1P15559 274 aaKnown RBP2.52□□□□□ -2.01
GPNMB-207ENST00000468723 ELK4P28324 431 aa2.52□□□□□ -2.01
GPNMB-207ENST00000468723 OR1E2P47887 323 aa2.52□□□□□ -2.01
GPNMB-207ENST00000468723 ERVS71-1P61550 626 aa2.52□□□□□ -2.01
GPNMB-207ENST00000468723 PSPHP78330 225 aa2.52□□□□□ -2.01
GPNMB-207ENST00000468723 CDK6Q00534 326 aa2.52□□□□□ -2.01
GPNMB-207ENST00000468723 LOXL1Q08397 574 aaPredicted RBP2.52□□□□□ -2.01
GPNMB-207ENST00000468723 SYCNQ0VAF6 134 aa2.52□□□□□ -2.01
GPNMB-207ENST00000468723 CEACAM16Q2WEN9 425 aa2.52□□□□□ -2.01
GPNMB-207ENST00000468723 DEFB116Q30KQ4 102 aa2.52□□□□□ -2.01
GPNMB-207ENST00000468723 CEACAM21Q3KPI0 293 aa2.52□□□□□ -2.01
GPNMB-207ENST00000468723 LIN52Q52LA3 116 aa2.52□□□□□ -2.01
GPNMB-207ENST00000468723 ACTBL2Q562R1 376 aa2.52□□□□□ -2.01
GPNMB-207ENST00000468723 TNFAIP8L3Q5GJ75 292 aa2.52□□□□□ -2.01
GPNMB-207ENST00000468723 UGT2A3Q6UWM9 527 aa2.52□□□□□ -2.01
GPNMB-207ENST00000468723 NTM-AS1Q6ZSK4 140 aa2.52□□□□□ -2.01
GPNMB-207ENST00000468723 LRP11Q86VZ4 500 aa2.52□□□□□ -2.01
GPNMB-207ENST00000468723 TMEM256Q8N2U0 113 aa2.52□□□□□ -2.01
GPNMB-207ENST00000468723 MUC15Q8N387 334 aa2.52□□□□□ -2.01
GPNMB-207ENST00000468723 LRRC18Q8N456 261 aa2.52□□□□□ -2.01
GPNMB-207ENST00000468723 NATD1Q8N6N6 113 aa2.52□□□□□ -2.01
GPNMB-207ENST00000468723 OR4M2Q8NGB6 313 aa2.52□□□□□ -2.01
GPNMB-207ENST00000468723 OR4M1Q8NGD0 313 aa2.52□□□□□ -2.01
GPNMB-207ENST00000468723 PFN4Q8NHR9 129 aa2.52□□□□□ -2.01
GPNMB-207ENST00000468723 PIGXQ8TBF5 258 aa2.52□□□□□ -2.01
GPNMB-207ENST00000468723 RBMXL1Q96E39 390 aaKnown RBP2.52□□□□□ -2.01
GPNMB-207ENST00000468723 DHRS9Q9BPW9 319 aa2.52□□□□□ -2.01
GPNMB-207ENST00000468723 DCUN1D5Q9BTE7 237 aa2.52□□□□□ -2.01
GPNMB-207ENST00000468723 POTEKPQ9BYX7 375 aa2.52□□□□□ -2.01
GPNMB-207ENST00000468723 CACYBPQ9HB71 228 aaKnown RBP2.52□□□□□ -2.01
GPNMB-207ENST00000468723 PAQR5Q9NXK6 330 aaPredicted RBP2.52□□□□□ -2.01
GPNMB-207ENST00000468723 DNAJC27Q9NZQ0 273 aa2.52□□□□□ -2.01
GPNMB-207ENST00000468723 EMC3Q9P0I2 261 aa2.52□□□□□ -2.01
GPNMB-207ENST00000468723 FBXL3Q9UKT7 428 aa2.52□□□□□ -2.01
GPNMB-207ENST00000468723 RAB22AQ9UL26 194 aa2.52□□□□□ -2.01
GPNMB-207ENST00000468723 V9GYQ6 96 aa2.52□□□□□ -2.01
GPNMB-207ENST00000468723 HRNRQ86YZ3 2850 aaPredicted RBP2.52□□□□□ -2.01
GPNMB-207ENST00000468723 CENPEQ02224 2701 aa2.52□□□□□ -2.01
GPNMB-207ENST00000468723 ROS1P08922 2347 aa2.52□□□□□ -2.01
GPNMB-207ENST00000468723 ARFGEF3Q5TH69 2177 aa2.51□□□□□ -2.01
GPNMB-207ENST00000468723 CCDC168Q8NDH2 2452 aa2.51□□□□□ -2.01
GPNMB-207ENST00000468723 ACANP16112 2415 aa2.51□□□□□ -2.01
GPNMB-207ENST00000468723 ZFHX3Q15911 3703 aa2.51□□□□□ -2.01
GPNMB-207ENST00000468723 LRBAP50851 2863 aa2.51□□□□□ -2.01
GPNMB-207ENST00000468723 IGKV1D-42A0A075B6H8 117 aa2.51□□□□□ -2.01
GPNMB-207ENST00000468723 A0A096LPI6 279 aa2.51□□□□□ -2.01
GPNMB-207ENST00000468723 IGHV6-1A0A0B4J1U7 121 aa2.51□□□□□ -2.01
GPNMB-207ENST00000468723 RBFOX3A6NFN3 312 aa2.51□□□□□ -2.01
GPNMB-207ENST00000468723 EVPLLA8MZ36 301 aa2.51□□□□□ -2.01
GPNMB-207ENST00000468723 H0YJW9 148 aa2.51□□□□□ -2.01
GPNMB-207ENST00000468723 H7C1C5 153 aa2.51□□□□□ -2.01
GPNMB-207ENST00000468723 FABP7O15540 132 aa2.51□□□□□ -2.01
GPNMB-207ENST00000468723 MPZL2O60487 215 aa2.51□□□□□ -2.01
GPNMB-207ENST00000468723 KRTAP5-8O75690 187 aa2.51□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms