RNA–Protein interactions for RNA: ENST00000467558.5

BRAT1-203, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 5

Gene BRAT1, Length 4,440 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-203ENST00000467558 F8VVB4 439 aa11.54□□□□□ -0.56
BRAT1-203ENST00000467558 F8VWA3 439 aa11.54□□□□□ -0.56
BRAT1-203ENST00000467558 RBFOX2O43251 390 aaKnown RBP eCLIP11.54□□□□□ -0.563e-6■■■■□ 21.5
BRAT1-203ENST00000467558 LRRC75BQ2VPJ9 315 aa11.54□□□□□ -0.56
BRAT1-203ENST00000467558 CCL19Q99731 98 aa11.54□□□□□ -0.56
BRAT1-203ENST00000467558 NABP2Q9BQ15 211 aa11.54□□□□□ -0.56
BRAT1-203ENST00000467558 KIF26AQ9ULI4 1882 aaPredicted RBP11.54□□□□□ -0.56
BRAT1-203ENST00000467558 PLAUP00749 431 aa11.54□□□□□ -0.56
BRAT1-203ENST00000467558 ID3Q02535 119 aa11.54□□□□□ -0.56
BRAT1-203ENST00000467558 HGFACQ04756 655 aa11.54□□□□□ -0.56
BRAT1-203ENST00000467558 FXYD3Q14802 87 aa11.54□□□□□ -0.56
BRAT1-203ENST00000467558 OR51G1Q8NGK1 321 aa11.54□□□□□ -0.56
BRAT1-203ENST00000467558 HTTP42858 3142 aa11.54□□□□□ -0.56
BRAT1-203ENST00000467558 H0YIZ8 118 aa11.54□□□□□ -0.56
BRAT1-203ENST00000467558 SIGLEC5O15389 551 aa11.54□□□□□ -0.56
BRAT1-203ENST00000467558 HIST1H1BP16401 226 aaKnown RBP11.54□□□□□ -0.56
BRAT1-203ENST00000467558 RCC1LQ96I51 464 aaKnown RBP11.54□□□□□ -0.56
BRAT1-203ENST00000467558 CBLN4Q9NTU7 201 aa11.54□□□□□ -0.56
BRAT1-203ENST00000467558 CADP27708 2225 aa11.54□□□□□ -0.56
BRAT1-203ENST00000467558 KIAA2026Q5HYC2 2103 aa11.53□□□□□ -0.56
BRAT1-203ENST00000467558 NPIPB11E5RHQ5 1161 aa11.53□□□□□ -0.56
BRAT1-203ENST00000467558 REG1AP05451 166 aa11.53□□□□□ -0.56
BRAT1-203ENST00000467558 ACAA1P09110 424 aaPredicted RBP11.53□□□□□ -0.56
BRAT1-203ENST00000467558 COLCA1Q6ZS62 124 aa11.53□□□□□ -0.56
BRAT1-203ENST00000467558 PRSS3P2Q8NHM4 247 aa11.53□□□□□ -0.56
BRAT1-203ENST00000467558 LRRK1Q38SD2 2015 aa11.53□□□□□ -0.56
BRAT1-203ENST00000467558 ELOA3CA0A087WX78 387 aaPredicted RBP11.53□□□□□ -0.56
BRAT1-203ENST00000467558 ZNF253O75346 499 aa11.53□□□□□ -0.56
BRAT1-203ENST00000467558 IQCJQ1A5X6 159 aa11.53□□□□□ -0.56
BRAT1-203ENST00000467558 RNASEKQ6P5S7 137 aaKnown RBP11.53□□□□□ -0.56
BRAT1-203ENST00000467558 TEX29Q8N6K0 151 aa11.53□□□□□ -0.56
BRAT1-203ENST00000467558 STPG3Q8N7X2 389 aa11.53□□□□□ -0.56
BRAT1-203ENST00000467558 C5orf17Q8NAS9 161 aa11.53□□□□□ -0.56
BRAT1-203ENST00000467558 MS4A10Q96PG2 267 aa11.53□□□□□ -0.56
BRAT1-203ENST00000467558 RARRES2Q99969 163 aa11.53□□□□□ -0.56
BRAT1-203ENST00000467558 MRPL20Q9BYC9 149 aaKnown RBP11.53□□□□□ -0.56
BRAT1-203ENST00000467558 MSRB2Q9Y3D2 182 aa11.53□□□□□ -0.56
BRAT1-203ENST00000467558 C2orf16Q68DN1 1984 aa11.53□□□□□ -0.56
BRAT1-203ENST00000467558 WNK2Q9Y3S1 2297 aa11.53□□□□□ -0.56
BRAT1-203ENST00000467558 LOC102723971A0A1B0GUV8 181 aa11.53□□□□□ -0.56
BRAT1-203ENST00000467558 PSPNO60542 156 aa11.53□□□□□ -0.56
BRAT1-203ENST00000467558 SNRPCP09234 159 aaKnown RBP11.53□□□□□ -0.56
BRAT1-203ENST00000467558 ARL14EPLP0DKL9 152 aa11.53□□□□□ -0.56
BRAT1-203ENST00000467558 ZNF273Q14593 569 aa11.53□□□□□ -0.56
BRAT1-203ENST00000467558 KLHDC1Q8N7A1 406 aa11.53□□□□□ -0.56
BRAT1-203ENST00000467558 FAM169BQ8N8A8 192 aa11.53□□□□□ -0.56
BRAT1-203ENST00000467558 NPCDR1Q9BY65 106 aa11.53□□□□□ -0.56
BRAT1-203ENST00000467558 SAA2-SAA4A0A096LPE2 208 aa11.53□□□□□ -0.56
BRAT1-203ENST00000467558 SLC31A2O15432 143 aa11.53□□□□□ -0.56
BRAT1-203ENST00000467558 IGKV3-15P01624 115 aa11.53□□□□□ -0.56
BRAT1-203ENST00000467558 SAA2P0DJI9 122 aaPredicted RBP11.53□□□□□ -0.56
BRAT1-203ENST00000467558 PF4V1P10720 104 aa11.53□□□□□ -0.56
BRAT1-203ENST00000467558 LY6DQ14210 128 aa11.53□□□□□ -0.56
BRAT1-203ENST00000467558 TFF1P04155 84 aa11.52□□□□□ -0.56
BRAT1-203ENST00000467558 LOXL3P58215 753 aa11.52□□□□□ -0.56
BRAT1-203ENST00000467558 SUPT4H1P63272 117 aaKnown RBP11.52□□□□□ -0.56
BRAT1-203ENST00000467558 RIGQ13278 110 aa11.52□□□□□ -0.56
BRAT1-203ENST00000467558 MRPL54Q6P161 138 aaKnown RBP11.52□□□□□ -0.56
BRAT1-203ENST00000467558 ASCL4Q6XD76 172 aa11.52□□□□□ -0.56
BRAT1-203ENST00000467558 SRD5A3Q9H8P0 318 aa11.52□□□□□ -0.56
BRAT1-203ENST00000467558 TECTAO75443 2155 aa11.52□□□□□ -0.57
BRAT1-203ENST00000467558 IGKV3-7A0A075B6H7 116 aa11.52□□□□□ -0.57
BRAT1-203ENST00000467558 PGPA6NDG6 321 aa11.52□□□□□ -0.57
BRAT1-203ENST00000467558 TMEM250H0YL14 139 aa11.52□□□□□ -0.57
BRAT1-203ENST00000467558 BMPR1BO00238 502 aa11.52□□□□□ -0.57
BRAT1-203ENST00000467558 PMS2P11Q13670 270 aa11.52□□□□□ -0.57
BRAT1-203ENST00000467558 CLEC5AQ9NY25 188 aa11.52□□□□□ -0.57
BRAT1-203ENST00000467558 NAGKQ9UJ70 344 aa11.52□□□□□ -0.57
BRAT1-203ENST00000467558 COL4A4P53420 1690 aaPredicted RBP11.52□□□□□ -0.57
BRAT1-203ENST00000467558 ORM1P02763 201 aa11.52□□□□□ -0.57
BRAT1-203ENST00000467558 MRPL32Q9BYC8 188 aaKnown RBP11.52□□□□□ -0.57
BRAT1-203ENST00000467558 IFI27L2Q9H2X8 130 aa11.52□□□□□ -0.57
BRAT1-203ENST00000467558 FUT9Q9Y231 359 aa11.52□□□□□ -0.57
BRAT1-203ENST00000467558 OBSL1O75147 1896 aa11.51□□□□□ -0.57
BRAT1-203ENST00000467558 A0A0G2JNJ9 132 aa11.51□□□□□ -0.57
BRAT1-203ENST00000467558 EIF3GO75821 320 aaKnown RBP eCLIP11.51□□□□□ -0.57
BRAT1-203ENST00000467558 PIP4P1Q86T03 277 aa11.51□□□□□ -0.57
BRAT1-203ENST00000467558 WFIKKN1Q96NZ8 548 aa11.51□□□□□ -0.57
BRAT1-203ENST00000467558 Q9UFV3 132 aa11.51□□□□□ -0.57
BRAT1-203ENST00000467558 LILRA1O75019 489 aa11.51□□□□□ -0.57
BRAT1-203ENST00000467558 DUTP33316 252 aaKnown RBP11.51□□□□□ -0.57
BRAT1-203ENST00000467558 AMTP48728 403 aa11.51□□□□□ -0.57
BRAT1-203ENST00000467558 FAM3BP58499 235 aaPredicted RBP11.51□□□□□ -0.57
BRAT1-203ENST00000467558 ZNF474Q6S9Z5 364 aaPredicted RBP11.51□□□□□ -0.57
BRAT1-203ENST00000467558 IGFL3Q6UXB1 125 aa11.51□□□□□ -0.57
BRAT1-203ENST00000467558 FBXL15Q9H469 300 aa11.51□□□□□ -0.57
BRAT1-203ENST00000467558 YTHDF2Q9Y5A9 579 aaKnown RBP11.51□□□□□ -0.57
BRAT1-203ENST00000467558 ARL2-SNX15V9GYD0 113 aa11.51□□□□□ -0.57
BRAT1-203ENST00000467558 USF3Q68DE3 2245 aa11.51□□□□□ -0.57
BRAT1-203ENST00000467558 TRBV6-6A0A0A6YYG2 114 aa11.51□□□□□ -0.57
BRAT1-203ENST00000467558 A8MWL6 223 aa11.51□□□□□ -0.57
BRAT1-203ENST00000467558 SNURFLB1AK76 121 aa11.51□□□□□ -0.57
BRAT1-203ENST00000467558 IGHV3-48P01763 117 aa11.51□□□□□ -0.57
BRAT1-203ENST00000467558 ZNF525Q8N782 197 aa11.51□□□□□ -0.57
BRAT1-203ENST00000467558 CACNG8Q8WXS5 425 aa11.51□□□□□ -0.57
BRAT1-203ENST00000467558 TMEM133Q9H2Q1 129 aa11.51□□□□□ -0.57
BRAT1-203ENST00000467558 OR51M1Q9H341 326 aa11.51□□□□□ -0.57
BRAT1-203ENST00000467558 MKI67P46013 3256 aaKnown RBP11.5□□□□□ -0.57
BRAT1-203ENST00000467558 IER3P46695 156 aa11.5□□□□□ -0.57
BRAT1-203ENST00000467558 PAFAH1B2P68402 229 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms