RNA–Protein interactions for RNA: ENST00000467539.1

CGREF1-208, Transcript of cell growth regulator with EF-hand domain 1, humanhuman

TSL 4

Gene CGREF1, Length 548 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CGREF1-208ENST00000467539 CTRB2Q6GPI1 263 aa13.87□□□□□ -0.19
CGREF1-208ENST00000467539 DGCR14Q96DF8 476 aaKnown RBP13.87□□□□□ -0.19
CGREF1-208ENST00000467539 FANCD2OSQ96PS1 177 aa13.87□□□□□ -0.19
CGREF1-208ENST00000467539 COMMD9Q9P000 198 aa13.87□□□□□ -0.19
CGREF1-208ENST00000467539 SMAD5-AS1Q9Y6J3 95 aa13.87□□□□□ -0.19
CGREF1-208ENST00000467539 OR2J3O76001 311 aa13.86□□□□□ -0.19
CGREF1-208ENST00000467539 S1PR2O95136 353 aa13.86□□□□□ -0.19
CGREF1-208ENST00000467539 DHFRP00374 187 aa13.86□□□□□ -0.19
CGREF1-208ENST00000467539 GP9P14770 177 aa13.86□□□□□ -0.19
CGREF1-208ENST00000467539 MYOD1P15172 320 aa13.86□□□□□ -0.19
CGREF1-208ENST00000467539 LPAR6P43657 344 aa13.86□□□□□ -0.19
CGREF1-208ENST00000467539 UCP3P55916 312 aa13.86□□□□□ -0.19
CGREF1-208ENST00000467539 OR2B8PP59922 312 aa13.86□□□□□ -0.19
CGREF1-208ENST00000467539 EXOSC2Q13868 293 aaKnown RBP13.86□□□□□ -0.19
CGREF1-208ENST00000467539 RPEL1Q2QD12 228 aa13.86□□□□□ -0.19
CGREF1-208ENST00000467539 C15orf32Q32M92 178 aa13.86□□□□□ -0.19
CGREF1-208ENST00000467539 ZNF585BQ52M93 769 aa13.86□□□□□ -0.19
CGREF1-208ENST00000467539 DMBX1Q8NFW5 382 aa13.86□□□□□ -0.19
CGREF1-208ENST00000467539 SRSF8Q9BRL6 282 aaKnown RBP13.86□□□□□ -0.19
CGREF1-208ENST00000467539 FXYD6Q9H0Q3 95 aa13.86□□□□□ -0.19
CGREF1-208ENST00000467539 SIGLEC8Q9NYZ4 499 aa13.86□□□□□ -0.19
CGREF1-208ENST00000467539 FBXL7Q9UJT9 491 aa13.86□□□□□ -0.19
CGREF1-208ENST00000467539 DMRT1Q9Y5R6 373 aa13.86□□□□□ -0.19
CGREF1-208ENST00000467539 BMPR1BO00238 502 aa13.85□□□□□ -0.19
CGREF1-208ENST00000467539 RLN1P04808 185 aa13.85□□□□□ -0.19
CGREF1-208ENST00000467539 AREGP15514 252 aa13.85□□□□□ -0.19
CGREF1-208ENST00000467539 HIST1H1BP16401 226 aaKnown RBP13.85□□□□□ -0.19
CGREF1-208ENST00000467539 C11orf87Q6NUJ2 197 aa13.85□□□□□ -0.19
CGREF1-208ENST00000467539 C15orf40Q8WUR7 153 aa13.85□□□□□ -0.19
CGREF1-208ENST00000467539 FCAMRQ8WWV6 532 aa13.85□□□□□ -0.19
CGREF1-208ENST00000467539 ABHD1Q96SE0 405 aa13.85□□□□□ -0.19
CGREF1-208ENST00000467539 RSRP1Q9BUV0 290 aa13.85□□□□□ -0.19
CGREF1-208ENST00000467539 COMMD5Q9GZQ3 224 aa13.85□□□□□ -0.19
CGREF1-208ENST00000467539 FAM212BQ9NTI7 297 aaPredicted RBP13.85□□□□□ -0.19
CGREF1-208ENST00000467539 TMEM140Q9NV12 185 aa13.85□□□□□ -0.19
CGREF1-208ENST00000467539 KLK11Q9UBX7 282 aa13.85□□□□□ -0.19
CGREF1-208ENST00000467539 NDUFB8O95169 186 aa13.84□□□□□ -0.19
CGREF1-208ENST00000467539 CSN3P07498 182 aa13.84□□□□□ -0.19
CGREF1-208ENST00000467539 S100GP29377 79 aa13.84□□□□□ -0.19
CGREF1-208ENST00000467539 C19orf35Q6ZS72 473 aa13.84□□□□□ -0.19
CGREF1-208ENST00000467539 EXTL2Q9UBQ6 330 aa13.84□□□□□ -0.19
CGREF1-208ENST00000467539 TEX50A0A1B0GTY4 177 aa13.83□□□□□ -0.2
CGREF1-208ENST00000467539 MARCH11A6NNE9 402 aa13.83□□□□□ -0.2
CGREF1-208ENST00000467539 KRASP01116 189 aa13.83□□□□□ -0.2
CGREF1-208ENST00000467539 DEFA4P12838 97 aa13.83□□□□□ -0.2
CGREF1-208ENST00000467539 MECP2P51608 486 aaKnown RBP13.83□□□□□ -0.2
CGREF1-208ENST00000467539 ERVK-16P61578 105 aa13.83□□□□□ -0.2
CGREF1-208ENST00000467539 OR52I2Q8NH67 350 aa13.83□□□□□ -0.2
CGREF1-208ENST00000467539 MTFP1Q9UDX5 166 aa13.83□□□□□ -0.2
CGREF1-208ENST00000467539 IGLV11-55A0A075B6I3 123 aa13.82□□□□□ -0.2
CGREF1-208ENST00000467539 IGLC7A0M8Q6 106 aa13.82□□□□□ -0.2
CGREF1-208ENST00000467539 H0Y980 276 aa13.82□□□□□ -0.2
CGREF1-208ENST00000467539 GGCTO75223 188 aaKnown RBP13.82□□□□□ -0.2
CGREF1-208ENST00000467539 TRAPPC2P0DI81 140 aa13.82□□□□□ -0.2
CGREF1-208ENST00000467539 TRAPPC2BP0DI82 140 aa13.82□□□□□ -0.2
CGREF1-208ENST00000467539 RPA2P15927 270 aa13.82□□□□□ -0.2
CGREF1-208ENST00000467539 SPCS2Q15005 226 aa13.82□□□□□ -0.2
CGREF1-208ENST00000467539 PHLDA2Q53GA4 152 aa13.82□□□□□ -0.2
CGREF1-208ENST00000467539 THOC7Q6I9Y2 204 aaKnown RBP13.82□□□□□ -0.2
CGREF1-208ENST00000467539 SLC38A6Q8IZM9 456 aa13.82□□□□□ -0.2
CGREF1-208ENST00000467539 Q8N1Y9 231 aa13.82□□□□□ -0.2
CGREF1-208ENST00000467539 OR1L8Q8NGR8 309 aa13.82□□□□□ -0.2
CGREF1-208ENST00000467539 QTRT1Q9BXR0 403 aaKnown RBP13.82□□□□□ -0.2
CGREF1-208ENST00000467539 MIXL1Q9H2W2 232 aa13.82□□□□□ -0.2
CGREF1-208ENST00000467539 PEMTQ9UBM1 199 aa13.82□□□□□ -0.2
CGREF1-208ENST00000467539 M0QYG6 137 aa13.81□□□□□ -0.2
CGREF1-208ENST00000467539 CTDSP2O14595 271 aa13.81□□□□□ -0.2
CGREF1-208ENST00000467539 IFNA6P05013 189 aa13.81□□□□□ -0.2
CGREF1-208ENST00000467539 REG1AP05451 166 aa13.81□□□□□ -0.2
CGREF1-208ENST00000467539 TBPP20226 339 aa13.81□□□□□ -0.2
CGREF1-208ENST00000467539 PTBP1P26599 531 aaKnown RBP eCLIP13.81□□□□□ -0.2
CGREF1-208ENST00000467539 TMBIM6P55061 237 aa13.81□□□□□ -0.2
CGREF1-208ENST00000467539 HSD17B13Q7Z5P4 300 aaPredicted RBP13.81□□□□□ -0.2
CGREF1-208ENST00000467539 TBC1D26Q86UD7 250 aa13.81□□□□□ -0.2
CGREF1-208ENST00000467539 HAPLN4Q86UW8 402 aa13.81□□□□□ -0.2
CGREF1-208ENST00000467539 GPHB5Q86YW7 130 aa13.81□□□□□ -0.2
CGREF1-208ENST00000467539 CLVS1Q8IUQ0 354 aaPredicted RBP13.81□□□□□ -0.2
CGREF1-208ENST00000467539 RAB2BQ8WUD1 216 aa13.81□□□□□ -0.2
CGREF1-208ENST00000467539 BCL7BQ9BQE9 202 aa13.81□□□□□ -0.2
CGREF1-208ENST00000467539 NDUFA4L2Q9NRX3 87 aa13.81□□□□□ -0.2
CGREF1-208ENST00000467539 FKBP11Q9NYL4 201 aa13.81□□□□□ -0.2
CGREF1-208ENST00000467539 TRBV7-1A0A0A6YYK4 115 aa13.8□□□□□ -0.2
CGREF1-208ENST00000467539 RGS5O15539 181 aa13.8□□□□□ -0.2
CGREF1-208ENST00000467539 SNAPC5O75971 98 aa13.8□□□□□ -0.2
CGREF1-208ENST00000467539 OR2C1O95371 312 aa13.8□□□□□ -0.2
CGREF1-208ENST00000467539 CD3DP04234 171 aa13.8□□□□□ -0.2
CGREF1-208ENST00000467539 G6PCP35575 357 aa13.8□□□□□ -0.2
CGREF1-208ENST00000467539 RNASE10Q5GAN6 216 aaKnown RBP13.8□□□□□ -0.2
CGREF1-208ENST00000467539 LHFPL1Q86WI0 220 aa13.8□□□□□ -0.2
CGREF1-208ENST00000467539 ARRDC1Q8N5I2 433 aa13.8□□□□□ -0.2
CGREF1-208ENST00000467539 OR10W1Q8NGF6 305 aa13.8□□□□□ -0.2
CGREF1-208ENST00000467539 EEF1AKMT3Q96AZ1 226 aa13.8□□□□□ -0.2
CGREF1-208ENST00000467539 CXorf58Q96LI9 332 aa13.8□□□□□ -0.2
CGREF1-208ENST00000467539 ASCL2Q99929 193 aa13.8□□□□□ -0.2
CGREF1-208ENST00000467539 THYN1Q9P016 225 aa13.8□□□□□ -0.2
CGREF1-208ENST00000467539 PPP5D1E7EU14 171 aa13.79□□□□□ -0.2
CGREF1-208ENST00000467539 LGALS9O00182 355 aa13.79□□□□□ -0.2
CGREF1-208ENST00000467539 SERPINE2P07093 398 aa13.79□□□□□ -0.2
CGREF1-208ENST00000467539 RPL5P46777 297 aaKnown RBP13.79□□□□□ -0.2
CGREF1-208ENST00000467539 RNASE12Q5GAN4 147 aaKnown RBP13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms