RNA–Protein interactions for RNA: ENST00000467302.5

PRPF38B-204, Transcript of pre-mRNA processing factor 38B, humanhuman

TSL 1 (best)

Gene PRPF38B, Length 2,043 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-204ENST00000467302 STAG3L2P0CL84 134 aa12.15□□□□□ -0.46
PRPF38B-204ENST00000467302 STAG3L3P0CL85 134 aa12.15□□□□□ -0.46
PRPF38B-204ENST00000467302 SSTP61278 116 aa12.15□□□□□ -0.46
PRPF38B-204ENST00000467302 RELBQ01201 579 aa12.15□□□□□ -0.46
PRPF38B-204ENST00000467302 EDDM3AQ14507 147 aa12.15□□□□□ -0.46
PRPF38B-204ENST00000467302 LTC4SQ16873 150 aa12.15□□□□□ -0.46
PRPF38B-204ENST00000467302 OR4A16Q8NH70 328 aa12.15□□□□□ -0.46
PRPF38B-204ENST00000467302 LRRC29Q8WV35 223 aa12.15□□□□□ -0.46
PRPF38B-204ENST00000467302 C1orf159Q96HA4 380 aa12.15□□□□□ -0.46
PRPF38B-204ENST00000467302 BTF3L4Q96K17 158 aa12.15□□□□□ -0.46
PRPF38B-204ENST00000467302 GGTLC1Q9BX51 225 aa12.15□□□□□ -0.46
PRPF38B-204ENST00000467302 MS4A5Q9H3V2 200 aa12.15□□□□□ -0.46
PRPF38B-204ENST00000467302 DUSP13Q9UII6 198 aa12.15□□□□□ -0.46
PRPF38B-204ENST00000467302 JPT1Q9UK76 154 aa12.15□□□□□ -0.46
PRPF38B-204ENST00000467302 PXMP4Q9Y6I8 212 aa12.15□□□□□ -0.46
PRPF38B-204ENST00000467302 NBEAQ8NFP9 2946 aa12.15□□□□□ -0.46
PRPF38B-204ENST00000467302 ACACAQ13085 2346 aa12.15□□□□□ -0.46
PRPF38B-204ENST00000467302 IGKV1D-17A0A075B6S4 117 aa12.15□□□□□ -0.47
PRPF38B-204ENST00000467302 YPEL1O60688 119 aa12.15□□□□□ -0.47
PRPF38B-204ENST00000467302 ARL14EPLP0DKL9 152 aa12.15□□□□□ -0.47
PRPF38B-204ENST00000467302 CCKARP32238 428 aa12.15□□□□□ -0.47
PRPF38B-204ENST00000467302 UCNP55089 124 aa12.15□□□□□ -0.47
PRPF38B-204ENST00000467302 GFRALQ6UXV0 394 aa12.15□□□□□ -0.47
PRPF38B-204ENST00000467302 VKORC1L1Q8N0U8 176 aa12.15□□□□□ -0.47
PRPF38B-204ENST00000467302 SFRP2Q96HF1 295 aa12.15□□□□□ -0.47
PRPF38B-204ENST00000467302 YPEL2Q96QA6 119 aa12.15□□□□□ -0.47
PRPF38B-204ENST00000467302 LSM4Q9Y4Z0 139 aaKnown RBP12.15□□□□□ -0.47
PRPF38B-204ENST00000467302 PGPEP1LA6NFU8 196 aa12.14□□□□□ -0.47
PRPF38B-204ENST00000467302 M0R1X1 148 aa12.14□□□□□ -0.47
PRPF38B-204ENST00000467302 SLC31A2O15432 143 aa12.14□□□□□ -0.47
PRPF38B-204ENST00000467302 ZNF134P52741 427 aa12.14□□□□□ -0.47
PRPF38B-204ENST00000467302 LOXL3P58215 753 aa12.14□□□□□ -0.47
PRPF38B-204ENST00000467302 FAM27E3Q08E93 113 aa12.14□□□□□ -0.47
PRPF38B-204ENST00000467302 LBHQ53QV2 105 aaPredicted RBP12.14□□□□□ -0.47
PRPF38B-204ENST00000467302 PLPPR2Q96GM1 343 aa12.14□□□□□ -0.47
PRPF38B-204ENST00000467302 C2orf88Q9BSF0 95 aa12.14□□□□□ -0.47
PRPF38B-204ENST00000467302 NDUFAF3Q9BU61 184 aa12.14□□□□□ -0.47
PRPF38B-204ENST00000467302 HEYLQ9NQ87 328 aaPredicted RBP12.14□□□□□ -0.47
PRPF38B-204ENST00000467302 ELOVL5Q9NYP7 299 aa12.14□□□□□ -0.47
PRPF38B-204ENST00000467302 GNG12Q9UBI6 72 aa12.14□□□□□ -0.47
PRPF38B-204ENST00000467302 TRAV3A0A0B4J244 114 aa12.13□□□□□ -0.47
PRPF38B-204ENST00000467302 A0A0U1RQK1 487 aa12.13□□□□□ -0.47
PRPF38B-204ENST00000467302 ZNF320A2RRD8 509 aa12.13□□□□□ -0.47
PRPF38B-204ENST00000467302 ZNF705GA8MUZ8 300 aaPredicted RBP12.13□□□□□ -0.47
PRPF38B-204ENST00000467302 SRRM5B3KS81 715 aa12.13□□□□□ -0.47
PRPF38B-204ENST00000467302 CXorf1O96002 111 aa12.13□□□□□ -0.47
PRPF38B-204ENST00000467302 GLRXP35754 106 aa12.13□□□□□ -0.47
PRPF38B-204ENST00000467302 RPL39P5Q59GN2 51 aa12.13□□□□□ -0.47
PRPF38B-204ENST00000467302 MIC13Q5XKP0 118 aa12.13□□□□□ -0.47
PRPF38B-204ENST00000467302 LRP11Q86VZ4 500 aa12.13□□□□□ -0.47
PRPF38B-204ENST00000467302 BEND2Q8NDZ0 799 aa12.13□□□□□ -0.47
PRPF38B-204ENST00000467302 OR2Z1Q8NG97 314 aa12.13□□□□□ -0.47
PRPF38B-204ENST00000467302 IFI27L2Q9H2X8 130 aa12.13□□□□□ -0.47
PRPF38B-204ENST00000467302 CHODLQ9H9P2 273 aa12.13□□□□□ -0.47
PRPF38B-204ENST00000467302 ZNF835Q9Y2P0 537 aa12.13□□□□□ -0.47
PRPF38B-204ENST00000467302 TRAPPC1Q9Y5R8 145 aa12.13□□□□□ -0.47
PRPF38B-204ENST00000467302 A0A0G2JNJ9 132 aa12.13□□□□□ -0.47
PRPF38B-204ENST00000467302 F2RL2O00254 374 aa12.13□□□□□ -0.47
PRPF38B-204ENST00000467302 IGHV3-13P01766 116 aa12.13□□□□□ -0.47
PRPF38B-204ENST00000467302 SSX2Q16385 188 aa12.13□□□□□ -0.47
PRPF38B-204ENST00000467302 MSMPQ1L6U9 139 aa12.13□□□□□ -0.47
PRPF38B-204ENST00000467302 ABHD12Q8N2K0 398 aa12.13□□□□□ -0.47
PRPF38B-204ENST00000467302 SGMS2Q8NHU3 365 aa12.13□□□□□ -0.47
PRPF38B-204ENST00000467302 DDB2Q92466 427 aa12.13□□□□□ -0.47
PRPF38B-204ENST00000467302 Q9UFV3 132 aa12.13□□□□□ -0.47
PRPF38B-204ENST00000467302 HCFC1P51610 2035 aa12.12□□□□□ -0.47
PRPF38B-204ENST00000467302 BSNQ9UPA5 3926 aa12.12□□□□□ -0.47
PRPF38B-204ENST00000467302 TRGV8A0A0C4DH27 118 aa12.12□□□□□ -0.47
PRPF38B-204ENST00000467302 TAS2R60P59551 318 aa12.12□□□□□ -0.47
PRPF38B-204ENST00000467302 ERVK-16P61578 105 aa12.12□□□□□ -0.47
PRPF38B-204ENST00000467302 MRPL41Q8IXM3 137 aaKnown RBP12.12□□□□□ -0.47
PRPF38B-204ENST00000467302 MISP3Q96FF7 219 aa12.12□□□□□ -0.47
PRPF38B-204ENST00000467302 TMEM140Q9NV12 185 aa12.12□□□□□ -0.47
PRPF38B-204ENST00000467302 TCF19Q9Y242 345 aa12.12□□□□□ -0.47
PRPF38B-204ENST00000467302 HEATR1Q9H583 2144 aaKnown RBP12.12□□□□□ -0.47
PRPF38B-204ENST00000467302 SCO2A0A1W2PP80 73 aa12.11□□□□□ -0.47
PRPF38B-204ENST00000467302 MGST3O14880 152 aa12.11□□□□□ -0.47
PRPF38B-204ENST00000467302 RNF224P0DH78 156 aa12.11□□□□□ -0.47
PRPF38B-204ENST00000467302 CFHR2P36980 270 aa12.11□□□□□ -0.47
PRPF38B-204ENST00000467302 KLF3P57682 345 aaPredicted RBP12.11□□□□□ -0.47
PRPF38B-204ENST00000467302 YPEL3P61236 119 aaPredicted RBP12.11□□□□□ -0.47
PRPF38B-204ENST00000467302 VHLLQ6RSH7 139 aa12.11□□□□□ -0.47
PRPF38B-204ENST00000467302 C1orf229Q6ZS94 237 aaPredicted RBP12.11□□□□□ -0.47
PRPF38B-204ENST00000467302 SNRNP40Q96DI7 357 aaKnown RBP12.11□□□□□ -0.47
PRPF38B-204ENST00000467302 SDSLQ96GA7 329 aa12.11□□□□□ -0.47
PRPF38B-204ENST00000467302 S1PR3Q99500 378 aa12.11□□□□□ -0.47
PRPF38B-204ENST00000467302 FAM234AQ9H0X4 552 aa12.11□□□□□ -0.47
PRPF38B-204ENST00000467302 YTHDF2Q9Y5A9 579 aaKnown RBP12.11□□□□□ -0.47
PRPF38B-204ENST00000467302 KIR2DS2P43631 304 aa12.11□□□□□ -0.47
PRPF38B-204ENST00000467302 RBPJQ06330 500 aa12.11□□□□□ -0.47
PRPF38B-204ENST00000467302 IQCJQ1A5X6 159 aa12.11□□□□□ -0.47
PRPF38B-204ENST00000467302 ARSJQ5FYB0 599 aaPredicted RBP12.11□□□□□ -0.47
PRPF38B-204ENST00000467302 OCC1Q8TAD7 63 aa12.11□□□□□ -0.47
PRPF38B-204ENST00000467302 TMEM204Q9BSN7 226 aa12.11□□□□□ -0.47
PRPF38B-204ENST00000467302 NPVFQ9HCQ7 196 aa12.11□□□□□ -0.47
PRPF38B-204ENST00000467302 CEP295Q9C0D2 2601 aa12.1□□□□□ -0.47
PRPF38B-204ENST00000467302 DMXL2Q8TDJ6 3036 aa12.1□□□□□ -0.47
PRPF38B-204ENST00000467302 MDFIC2A0A1B0GVS7 189 aa12.1□□□□□ -0.47
PRPF38B-204ENST00000467302 OR4A8P0C604 315 aa12.1□□□□□ -0.47
PRPF38B-204ENST00000467302 FAM87AP0C7U9 286 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms