RNA–Protein interactions for RNA: ENST00000467213.5

CHD1L-205, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 1 (best)

Gene CHD1L, Length 2,782 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-205ENST00000467213 PRAMEF6Q5VXH4 476 aa12.87□□□□□ -0.35
CHD1L-205ENST00000467213 NIT1Q86X76 327 aa12.87□□□□□ -0.35
CHD1L-205ENST00000467213 MCEMP1Q8IX19 187 aa12.87□□□□□ -0.35
CHD1L-205ENST00000467213 OR8I2Q8N0Y5 310 aa12.87□□□□□ -0.35
CHD1L-205ENST00000467213 OR4P4Q8NGL7 312 aa12.87□□□□□ -0.35
CHD1L-205ENST00000467213 AQP7O14520 342 aa12.87□□□□□ -0.35
CHD1L-205ENST00000467213 ZNF83P51522 516 aa12.87□□□□□ -0.35
CHD1L-205ENST00000467213 HNRNPA3P51991 378 aaKnown RBP12.87□□□□□ -0.35
CHD1L-205ENST00000467213 RPS20P60866 119 aaKnown RBP12.87□□□□□ -0.35
CHD1L-205ENST00000467213 KRTDAPP60985 99 aa12.87□□□□□ -0.35
CHD1L-205ENST00000467213 C11orf53Q8IXP5 236 aa12.87□□□□□ -0.35
CHD1L-205ENST00000467213 STPG3Q8N7X2 389 aa12.87□□□□□ -0.35
CHD1L-205ENST00000467213 NEUROG1Q92886 237 aa12.87□□□□□ -0.35
CHD1L-205ENST00000467213 RNF114Q9Y508 228 aa12.87□□□□□ -0.35
CHD1L-205ENST00000467213 USF3Q68DE3 2245 aa12.87□□□□□ -0.35
CHD1L-205ENST00000467213 NKX6-3A6NJ46 265 aa12.86□□□□□ -0.35
CHD1L-205ENST00000467213 F2Z2F3 143 aa12.86□□□□□ -0.35
CHD1L-205ENST00000467213 SELENOVP59797 346 aa12.86□□□□□ -0.35
CHD1L-205ENST00000467213 PQLC2Q6ZP29 291 aa12.86□□□□□ -0.35
CHD1L-205ENST00000467213 FAM90A1Q86YD7 464 aa12.86□□□□□ -0.35
CHD1L-205ENST00000467213 PILRBQ9UKJ0 227 aa12.86□□□□□ -0.35
CHD1L-205ENST00000467213 FOXA2Q9Y261 457 aaPredicted RBP12.86□□□□□ -0.35
CHD1L-205ENST00000467213 BRWD1Q9NSI6 2320 aa12.86□□□□□ -0.35
CHD1L-205ENST00000467213 AESQ08117 197 aa12.86□□□□□ -0.35
CHD1L-205ENST00000467213 KLF5Q13887 457 aaPredicted RBP12.86□□□□□ -0.35
CHD1L-205ENST00000467213 MMDQ15546 238 aa12.86□□□□□ -0.35
CHD1L-205ENST00000467213 CXXC4Q9H2H0 198 aa12.86□□□□□ -0.35
CHD1L-205ENST00000467213 NCOR1P1Q9H4R4 102 aa12.86□□□□□ -0.35
CHD1L-205ENST00000467213 PCSK5Q92824 1860 aa12.86□□□□□ -0.35
CHD1L-205ENST00000467213 IGHV2-26A0A0B4J1V2 119 aa12.86□□□□□ -0.35
CHD1L-205ENST00000467213 IZUMO1RA6ND01 250 aa12.86□□□□□ -0.35
CHD1L-205ENST00000467213 BMPR1BO00238 502 aa12.86□□□□□ -0.35
CHD1L-205ENST00000467213 C3orf79P0CE67 100 aa12.86□□□□□ -0.35
CHD1L-205ENST00000467213 RPS16P62249 146 aaKnown RBP12.86□□□□□ -0.35
CHD1L-205ENST00000467213 TIGITQ495A1 244 aa12.86□□□□□ -0.35
CHD1L-205ENST00000467213 CENPWQ5EE01 88 aa12.86□□□□□ -0.35
CHD1L-205ENST00000467213 LEMD1Q68G75 181 aa12.86□□□□□ -0.35
CHD1L-205ENST00000467213 FAM231DQ6ZW35 169 aa12.86□□□□□ -0.35
CHD1L-205ENST00000467213 STPG4Q8N801 248 aa12.86□□□□□ -0.35
CHD1L-205ENST00000467213 SEPSECSQ9HD40 501 aaKnown RBP12.86□□□□□ -0.35
CHD1L-205ENST00000467213 SLC35D1Q9NTN3 355 aa12.86□□□□□ -0.35
CHD1L-205ENST00000467213 C1RLQ9NZP8 487 aa12.86□□□□□ -0.35
CHD1L-205ENST00000467213 TRIOO75962 3097 aa12.85□□□□□ -0.35
CHD1L-205ENST00000467213 PI4KAP42356 2102 aa12.85□□□□□ -0.35
CHD1L-205ENST00000467213 A0A1W2PRE2 83 aa12.85□□□□□ -0.35
CHD1L-205ENST00000467213 C3orf80F5H4A9 247 aa12.85□□□□□ -0.35
CHD1L-205ENST00000467213 OTX2P32243 289 aa12.85□□□□□ -0.35
CHD1L-205ENST00000467213 GPR12P47775 334 aa12.85□□□□□ -0.35
CHD1L-205ENST00000467213 SRYQ05066 204 aa12.85□□□□□ -0.35
CHD1L-205ENST00000467213 UBE2V1Q13404 147 aa12.85□□□□□ -0.35
CHD1L-205ENST00000467213 ZPBPQ9BS86 351 aa12.85□□□□□ -0.35
CHD1L-205ENST00000467213 TCF19Q9Y242 345 aa12.85□□□□□ -0.35
CHD1L-205ENST00000467213 C15orf61A6NNL5 157 aa12.85□□□□□ -0.35
CHD1L-205ENST00000467213 PROP1O75360 226 aa12.85□□□□□ -0.35
CHD1L-205ENST00000467213 PPOXP50336 477 aa12.85□□□□□ -0.35
CHD1L-205ENST00000467213 POU2AF1Q16633 256 aa12.85□□□□□ -0.35
CHD1L-205ENST00000467213 SPINK9Q5DT21 86 aa12.85□□□□□ -0.35
CHD1L-205ENST00000467213 Q6ZN92 141 aa12.85□□□□□ -0.35
CHD1L-205ENST00000467213 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.85□□□□□ -0.35
CHD1L-205ENST00000467213 ZNF439Q8NDP4 499 aa12.85□□□□□ -0.35
CHD1L-205ENST00000467213 MRGPRDQ8TDS7 321 aa12.85□□□□□ -0.35
CHD1L-205ENST00000467213 DDB2Q92466 427 aa12.85□□□□□ -0.35
CHD1L-205ENST00000467213 TXN2Q99757 166 aa12.85□□□□□ -0.35
CHD1L-205ENST00000467213 PSG11Q9UQ72 335 aa12.85□□□□□ -0.35
CHD1L-205ENST00000467213 LOXL2Q9Y4K0 774 aa12.85□□□□□ -0.35
CHD1L-205ENST00000467213 LINC00869P0C866 280 aa12.84□□□□□ -0.35
CHD1L-205ENST00000467213 GABRA2P47869 451 aa12.84□□□□□ -0.35
CHD1L-205ENST00000467213 SAPCD1Q5SSQ6 148 aa12.84□□□□□ -0.35
CHD1L-205ENST00000467213 TSKUQ8WUA8 353 aa12.84□□□□□ -0.35
CHD1L-205ENST00000467213 IGF2BP2-AS1Q96M15 143 aa12.84□□□□□ -0.35
CHD1L-205ENST00000467213 TTTY12Q9BZ98 90 aa12.84□□□□□ -0.35
CHD1L-205ENST00000467213 BET1LQ9NYM9 111 aa12.84□□□□□ -0.35
CHD1L-205ENST00000467213 TECRQ9NZ01 308 aaKnown RBP12.84□□□□□ -0.35
CHD1L-205ENST00000467213 FOXJ2Q9P0K8 574 aa12.84□□□□□ -0.35
CHD1L-205ENST00000467213 COL27A1Q8IZC6 1860 aaPredicted RBP12.84□□□□□ -0.35
CHD1L-205ENST00000467213 ZNHIT1O43257 154 aa12.84□□□□□ -0.35
CHD1L-205ENST00000467213 TCF21O43680 179 aa12.84□□□□□ -0.35
CHD1L-205ENST00000467213 BMP5P22003 454 aa12.84□□□□□ -0.35
CHD1L-205ENST00000467213 TSPOP30536 169 aa12.84□□□□□ -0.35
CHD1L-205ENST00000467213 SMIM21Q3B7S5 101 aa12.84□□□□□ -0.35
CHD1L-205ENST00000467213 FAM162BQ5T6X4 162 aa12.84□□□□□ -0.35
CHD1L-205ENST00000467213 OR13A1Q8NGR1 328 aa12.84□□□□□ -0.35
CHD1L-205ENST00000467213 Q8TCH9 128 aa12.84□□□□□ -0.35
CHD1L-205ENST00000467213 BORCS7Q96B45 105 aa12.84□□□□□ -0.35
CHD1L-205ENST00000467213 TMEM14BQ9NUH8 114 aa12.84□□□□□ -0.35
CHD1L-205ENST00000467213 COX11Q9Y6N1 276 aa12.84□□□□□ -0.35
CHD1L-205ENST00000467213 HCFC1P51610 2035 aa12.83□□□□□ -0.36
CHD1L-205ENST00000467213 F2RL2O00254 374 aa12.83□□□□□ -0.36
CHD1L-205ENST00000467213 FCGR3BO75015 233 aa12.83□□□□□ -0.36
CHD1L-205ENST00000467213 CA2P00918 260 aa12.83□□□□□ -0.36
CHD1L-205ENST00000467213 IGLV2-8P01709 118 aa12.83□□□□□ -0.36
CHD1L-205ENST00000467213 NPY1RP25929 384 aa12.83□□□□□ -0.36
CHD1L-205ENST00000467213 CDKN1BP46527 198 aa12.83□□□□□ -0.36
CHD1L-205ENST00000467213 BATFQ16520 125 aa12.83□□□□□ -0.36
CHD1L-205ENST00000467213 TBR1Q16650 682 aa12.83□□□□□ -0.36
CHD1L-205ENST00000467213 ZNF738Q8NE65 137 aa12.83□□□□□ -0.36
CHD1L-205ENST00000467213 ABI3Q9P2A4 366 aa12.83□□□□□ -0.36
CHD1L-205ENST00000467213 TAS2R45P59539 299 aa12.83□□□□□ -0.36
CHD1L-205ENST00000467213 RBX1P62877 108 aa12.83□□□□□ -0.36
CHD1L-205ENST00000467213 PEAR1Q5VY43 1037 aaPredicted RBP12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms