RNA–Protein interactions for RNA: ENST00000466489.1

PMF1-204, Transcript of polyamine modulated factor 1, humanhuman

TSL 1 (best)

Gene PMF1, Length 933 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMF1-204ENST00000466489 SPINT2O43291 252 aa8.24□□□□□ -1.09
PMF1-204ENST00000466489 ENSAO43768 121 aaKnown RBP8.24□□□□□ -1.09
PMF1-204ENST00000466489 CST7O76096 145 aa8.24□□□□□ -1.09
PMF1-204ENST00000466489 LIPFP07098 398 aa8.24□□□□□ -1.09
PMF1-204ENST00000466489 SCTP09683 121 aa8.24□□□□□ -1.09
PMF1-204ENST00000466489 PSG2P11465 335 aa8.24□□□□□ -1.09
PMF1-204ENST00000466489 SRP14P37108 136 aaKnown RBP8.24□□□□□ -1.09
PMF1-204ENST00000466489 FAM3BP58499 235 aaPredicted RBP8.24□□□□□ -1.09
PMF1-204ENST00000466489 ERVK11-1P61568 191 aa8.24□□□□□ -1.09
PMF1-204ENST00000466489 MEF2BQ02080 365 aaPredicted RBP8.24□□□□□ -1.09
PMF1-204ENST00000466489 ICAM4Q14773 271 aa8.24□□□□□ -1.09
PMF1-204ENST00000466489 AKIRIN2Q53H80 203 aa8.24□□□□□ -1.09
PMF1-204ENST00000466489 WDR25Q64LD2 544 aaPredicted RBP8.24□□□□□ -1.09
PMF1-204ENST00000466489 SPSB3Q6PJ21 355 aa8.24□□□□□ -1.09
PMF1-204ENST00000466489 OR10A7Q8NGE5 316 aa8.24□□□□□ -1.09
PMF1-204ENST00000466489 ZNF488Q96MN9 340 aa8.24□□□□□ -1.09
PMF1-204ENST00000466489 CCL13Q99616 98 aa8.24□□□□□ -1.09
PMF1-204ENST00000466489 TMEM147Q9BVK8 224 aa8.24□□□□□ -1.09
PMF1-204ENST00000466489 HES4Q9HCC6 221 aa8.24□□□□□ -1.09
PMF1-204ENST00000466489 CCL28Q9NRJ3 127 aa8.24□□□□□ -1.09
PMF1-204ENST00000466489 HIF1ANQ9NWT6 349 aa8.24□□□□□ -1.09
PMF1-204ENST00000466489 SLC25A10Q9UBX3 287 aaPredicted RBP8.24□□□□□ -1.09
PMF1-204ENST00000466489 HSPB7Q9UBY9 170 aa8.24□□□□□ -1.09
PMF1-204ENST00000466489 VPS13CQ709C8 3753 aa8.24□□□□□ -1.09
PMF1-204ENST00000466489 LOC105371242A0A075B767 164 aa8.23□□□□□ -1.09
PMF1-204ENST00000466489 CTXND1A0A1B0GTU2 59 aa8.23□□□□□ -1.09
PMF1-204ENST00000466489 ZNF727A8MUV8 499 aa8.23□□□□□ -1.09
PMF1-204ENST00000466489 PPP5D1E7EU14 171 aa8.23□□□□□ -1.09
PMF1-204ENST00000466489 F6UZH7 168 aa8.23□□□□□ -1.09
PMF1-204ENST00000466489 DVL1O14640 695 aa8.23□□□□□ -1.09
PMF1-204ENST00000466489 ITGB1BP1O14713 200 aa8.23□□□□□ -1.09
PMF1-204ENST00000466489 RAB29O14966 203 aa8.23□□□□□ -1.09
PMF1-204ENST00000466489 SIGLEC5O15389 551 aa8.23□□□□□ -1.09
PMF1-204ENST00000466489 FBP1P09467 338 aa8.23□□□□□ -1.09
PMF1-204ENST00000466489 NDUFB7P17568 137 aa8.23□□□□□ -1.09
PMF1-204ENST00000466489 PRDX2P32119 198 aa8.23□□□□□ -1.09
PMF1-204ENST00000466489 CEACAM6P40199 344 aa8.23□□□□□ -1.09
PMF1-204ENST00000466489 HTD2P86397 168 aa8.23□□□□□ -1.09
PMF1-204ENST00000466489 ELOBQ15370 118 aa8.23□□□□□ -1.09
PMF1-204ENST00000466489 RTL8BQ17RB0 113 aa8.23□□□□□ -1.09
PMF1-204ENST00000466489 ZNF674Q2M3X9 581 aa8.23□□□□□ -1.09
PMF1-204ENST00000466489 COX19Q49B96 90 aa8.23□□□□□ -1.09
PMF1-204ENST00000466489 LYPD2Q6UXB3 125 aa8.23□□□□□ -1.09
PMF1-204ENST00000466489 ZNF788Q6ZQV5 615 aa8.23□□□□□ -1.09
PMF1-204ENST00000466489 CYP2G1PQ6ZSU1 146 aa8.23□□□□□ -1.09
PMF1-204ENST00000466489 FGFRL1Q8N441 504 aa8.23□□□□□ -1.09
PMF1-204ENST00000466489 TMEM217Q8N7C4 229 aa8.23□□□□□ -1.09
PMF1-204ENST00000466489 OR52E5Q8NH55 327 aa8.23□□□□□ -1.09
PMF1-204ENST00000466489 H1FXQ92522 213 aaKnown RBP8.23□□□□□ -1.09
PMF1-204ENST00000466489 TAF15Q92804 592 aaKnown RBP eCLIP8.23□□□□□ -1.09
PMF1-204ENST00000466489 LHX4Q969G2 390 aa8.23□□□□□ -1.09
PMF1-204ENST00000466489 GPR146Q96CH1 333 aa8.23□□□□□ -1.09
PMF1-204ENST00000466489 SDSLQ96GA7 329 aa8.23□□□□□ -1.09
PMF1-204ENST00000466489 RCC1LQ96I51 464 aaKnown RBP8.23□□□□□ -1.09
PMF1-204ENST00000466489 SMR3AQ99954 134 aa8.23□□□□□ -1.09
PMF1-204ENST00000466489 C19orf24Q9BVV8 132 aa8.23□□□□□ -1.09
PMF1-204ENST00000466489 WDR61Q9GZS3 305 aaKnown RBP8.23□□□□□ -1.09
PMF1-204ENST00000466489 FAM234AQ9H0X4 552 aa8.23□□□□□ -1.09
PMF1-204ENST00000466489 SH3BGRL3Q9H299 93 aa8.23□□□□□ -1.09
PMF1-204ENST00000466489 GSN-AS1Q9NRJ2 163 aa8.23□□□□□ -1.09
PMF1-204ENST00000466489 TMEM160Q9NX00 188 aa8.23□□□□□ -1.09
PMF1-204ENST00000466489 GNG13Q9P2W3 67 aa8.23□□□□□ -1.09
PMF1-204ENST00000466489 GAB2Q9UQC2 676 aa8.23□□□□□ -1.09
PMF1-204ENST00000466489 POLR3KQ9Y2Y1 108 aaPredicted RBP8.23□□□□□ -1.09
PMF1-204ENST00000466489 C2CD3Q4AC94 2353 aa8.22□□□□□ -1.09
PMF1-204ENST00000466489 IGKV1D-17A0A075B6S4 117 aa8.22□□□□□ -1.09
PMF1-204ENST00000466489 TRBV23-1A0A0A0MS06 115 aa8.22□□□□□ -1.09
PMF1-204ENST00000466489 TRAV24A0A0B4J272 114 aa8.22□□□□□ -1.09
PMF1-204ENST00000466489 ZNF729A6NN14 1252 aaPredicted RBP8.22□□□□□ -1.09
PMF1-204ENST00000466489 ZNF737O75373 536 aa8.22□□□□□ -1.09
PMF1-204ENST00000466489 KBTBD11O94819 623 aa8.22□□□□□ -1.09
PMF1-204ENST00000466489 HAND1O96004 215 aa8.22□□□□□ -1.09
PMF1-204ENST00000466489 OR2B8PP59922 312 aa8.22□□□□□ -1.09
PMF1-204ENST00000466489 RAB11AP62491 216 aa8.22□□□□□ -1.09
PMF1-204ENST00000466489 TNFRSF9Q07011 255 aa8.22□□□□□ -1.09
PMF1-204ENST00000466489 HAGHQ16775 308 aa8.22□□□□□ -1.09
PMF1-204ENST00000466489 TMEM14EPQ6UXP3 125 aa8.22□□□□□ -1.09
PMF1-204ENST00000466489 H2BFWTQ7Z2G1 175 aa8.22□□□□□ -1.09
PMF1-204ENST00000466489 BATF2Q8N1L9 274 aa8.22□□□□□ -1.09
PMF1-204ENST00000466489 FAM216BQ8N7L0 139 aa8.22□□□□□ -1.09
PMF1-204ENST00000466489 CYB561D1Q8N8Q1 229 aa8.22□□□□□ -1.09
PMF1-204ENST00000466489 RNASEH2CQ8TDP1 164 aaKnown RBP8.22□□□□□ -1.09
PMF1-204ENST00000466489 C2CD4CQ8TF44 421 aa8.22□□□□□ -1.09
PMF1-204ENST00000466489 YPEL4Q96NS1 127 aa8.22□□□□□ -1.09
PMF1-204ENST00000466489 GAFA1Q96PS6 74 aa8.22□□□□□ -1.09
PMF1-204ENST00000466489 SRD5A3Q9H8P0 318 aa8.22□□□□□ -1.09
PMF1-204ENST00000466489 CTSZQ9UBR2 303 aa8.22□□□□□ -1.09
PMF1-204ENST00000466489 CACNG5Q9UF02 275 aa8.22□□□□□ -1.09
PMF1-204ENST00000466489 CDC42EP3Q9UKI2 254 aa8.22□□□□□ -1.09
PMF1-204ENST00000466489 ARL2-SNX15V9GYD0 113 aa8.22□□□□□ -1.09
PMF1-204ENST00000466489 ARHGAP32A7KAX9 2087 aa8.22□□□□□ -1.09
PMF1-204ENST00000466489 IGHV2-70DA0A0C4DH43 119 aa8.21□□□□□ -1.1
PMF1-204ENST00000466489 hCG_1809904A0A1W2PP81 198 aa8.21□□□□□ -1.1
PMF1-204ENST00000466489 A0A1W2PPE2 198 aa8.21□□□□□ -1.1
PMF1-204ENST00000466489 A0A1W2PR64 198 aa8.21□□□□□ -1.1
PMF1-204ENST00000466489 A0A1W2PRV1 198 aa8.21□□□□□ -1.1
PMF1-204ENST00000466489 MAP1LC3B2A6NCE7 125 aa8.21□□□□□ -1.1
PMF1-204ENST00000466489 FNDC10F2Z333 226 aa8.21□□□□□ -1.1
PMF1-204ENST00000466489 TNFRSF13BO14836 293 aaPredicted RBP8.21□□□□□ -1.1
PMF1-204ENST00000466489 GCGP01275 180 aa8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms