RNA–Protein interactions for RNA: ENST00000466288.1

CXCR4-203, Transcript of C-X-C motif chemokine receptor 4, humanhuman

TSL 1 (best)

Gene CXCR4, Length 1,485 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4-203ENST00000466288 RCVRNP35243 200 aa10.82□□□□□ -0.68
CXCR4-203ENST00000466288 GUCA2BQ16661 112 aa10.82□□□□□ -0.68
CXCR4-203ENST00000466288 OR56B1Q8NGI3 324 aa10.82□□□□□ -0.68
CXCR4-203ENST00000466288 Q96M66 194 aa10.82□□□□□ -0.68
CXCR4-203ENST00000466288 TMEM68Q96MH6 324 aa10.82□□□□□ -0.68
CXCR4-203ENST00000466288 GGTLC1Q9BX51 225 aa10.82□□□□□ -0.68
CXCR4-203ENST00000466288 SELENOIQ9C0D9 397 aa10.82□□□□□ -0.68
CXCR4-203ENST00000466288 NUDT15Q9NV35 164 aa10.82□□□□□ -0.68
CXCR4-203ENST00000466288 KLK11Q9UBX7 282 aa10.82□□□□□ -0.68
CXCR4-203ENST00000466288 RAB27BO00194 218 aa10.81□□□□□ -0.68
CXCR4-203ENST00000466288 BMPR1BO00238 502 aa10.81□□□□□ -0.68
CXCR4-203ENST00000466288 SNAPC5O75971 98 aa10.81□□□□□ -0.68
CXCR4-203ENST00000466288 IL5P05113 134 aa10.81□□□□□ -0.68
CXCR4-203ENST00000466288 MGMTP16455 207 aa10.81□□□□□ -0.68
CXCR4-203ENST00000466288 EDN2P20800 178 aa10.81□□□□□ -0.68
CXCR4-203ENST00000466288 KIR2DS2P43631 304 aa10.81□□□□□ -0.68
CXCR4-203ENST00000466288 CBX5P45973 191 aa10.81□□□□□ -0.68
CXCR4-203ENST00000466288 LINC00205P59089 165 aa10.81□□□□□ -0.68
CXCR4-203ENST00000466288 PJVKQ0ZLH3 352 aa10.81□□□□□ -0.68
CXCR4-203ENST00000466288 MEF2DQ14814 521 aa10.81□□□□□ -0.68
CXCR4-203ENST00000466288 RBMS2Q15434 407 aaKnown RBP10.81□□□□□ -0.68
CXCR4-203ENST00000466288 LYG2Q86SG7 212 aa10.81□□□□□ -0.68
CXCR4-203ENST00000466288 WFDC3Q8IUB2 231 aa10.81□□□□□ -0.68
CXCR4-203ENST00000466288 DYNLRB2Q8TF09 96 aa10.81□□□□□ -0.68
CXCR4-203ENST00000466288 IL1F10Q8WWZ1 152 aa10.81□□□□□ -0.68
CXCR4-203ENST00000466288 WDR89Q96FK6 387 aaPredicted RBP10.81□□□□□ -0.68
CXCR4-203ENST00000466288 ST6GAL2Q96JF0 529 aa10.81□□□□□ -0.68
CXCR4-203ENST00000466288 SLC25A21Q9BQT8 299 aaPredicted RBP10.81□□□□□ -0.68
CXCR4-203ENST00000466288 GPN1Q9HCN4 374 aaPredicted RBP10.81□□□□□ -0.68
CXCR4-203ENST00000466288 MCUBQ9NWR8 336 aa10.81□□□□□ -0.68
CXCR4-203ENST00000466288 A0A0B4J293 547 aa10.81□□□□□ -0.68
CXCR4-203ENST00000466288 PDCD6O75340 191 aa10.81□□□□□ -0.68
CXCR4-203ENST00000466288 NDUFB6O95139 128 aa10.81□□□□□ -0.68
CXCR4-203ENST00000466288 RPS16P62249 146 aaKnown RBP10.81□□□□□ -0.68
CXCR4-203ENST00000466288 FAM89BQ8N5H3 189 aa10.81□□□□□ -0.68
CXCR4-203ENST00000466288 OR10R2Q8NGX6 335 aa10.81□□□□□ -0.68
CXCR4-203ENST00000466288 C20orf85Q9H1P6 137 aa10.81□□□□□ -0.68
CXCR4-203ENST00000466288 PLA2G2EQ9NZK7 142 aa10.81□□□□□ -0.68
CXCR4-203ENST00000466288 LOC102724200A0A096LPH7 203 aaPredicted RBP10.8□□□□□ -0.68
CXCR4-203ENST00000466288 SNRPGP15A8MWD9 76 aa10.8□□□□□ -0.68
CXCR4-203ENST00000466288 ITGB1BP1O14713 200 aa10.8□□□□□ -0.68
CXCR4-203ENST00000466288 NDUFB8O95169 186 aa10.8□□□□□ -0.68
CXCR4-203ENST00000466288 CD74P04233 296 aa10.8□□□□□ -0.68
CXCR4-203ENST00000466288 CRYGBP07316 175 aa10.8□□□□□ -0.68
CXCR4-203ENST00000466288 FOLR2P14207 255 aa10.8□□□□□ -0.68
CXCR4-203ENST00000466288 ATF4P18848 351 aaPredicted RBP10.8□□□□□ -0.68
CXCR4-203ENST00000466288 LGALS7P47929 136 aa10.8□□□□□ -0.68
CXCR4-203ENST00000466288 ZFP69Q49AA0 526 aa10.8□□□□□ -0.68
CXCR4-203ENST00000466288 SLC16A13Q7RTY0 426 aa10.8□□□□□ -0.68
CXCR4-203ENST00000466288 ZNF383Q8NA42 475 aa10.8□□□□□ -0.68
CXCR4-203ENST00000466288 ZBTB8BQ8NAP8 495 aaPredicted RBP10.8□□□□□ -0.68
CXCR4-203ENST00000466288 TM2D1Q9BX74 207 aa10.8□□□□□ -0.68
CXCR4-203ENST00000466288 TMEM59Q9BXS4 323 aa10.8□□□□□ -0.68
CXCR4-203ENST00000466288 MED28Q9H204 178 aa10.8□□□□□ -0.68
CXCR4-203ENST00000466288 COA4Q9NYJ1 87 aa10.8□□□□□ -0.68
CXCR4-203ENST00000466288 MSGN1A6NI15 193 aa10.79□□□□□ -0.68
CXCR4-203ENST00000466288 C2orf70A6NJV1 201 aa10.79□□□□□ -0.68
CXCR4-203ENST00000466288 IGLV2-23P01705 113 aa10.79□□□□□ -0.68
CXCR4-203ENST00000466288 PLA2G7Q13093 441 aa10.79□□□□□ -0.68
CXCR4-203ENST00000466288 UNC119Q13432 240 aa10.79□□□□□ -0.68
CXCR4-203ENST00000466288 RNASE12Q5GAN4 147 aaKnown RBP10.79□□□□□ -0.68
CXCR4-203ENST00000466288 STEAP1BQ6NZ63 245 aa10.79□□□□□ -0.68
CXCR4-203ENST00000466288 PDPNQ86YL7 162 aa10.79□□□□□ -0.68
CXCR4-203ENST00000466288 SULT4A1Q9BR01 284 aa10.79□□□□□ -0.68
CXCR4-203ENST00000466288 LPAR5Q9H1C0 372 aa10.79□□□□□ -0.68
CXCR4-203ENST00000466288 TECRQ9NZ01 308 aaKnown RBP10.79□□□□□ -0.68
CXCR4-203ENST00000466288 ZNF230Q9UIE0 474 aaPredicted RBP10.79□□□□□ -0.68
CXCR4-203ENST00000466288 SCP2D1Q9UJQ7 156 aa10.79□□□□□ -0.68
CXCR4-203ENST00000466288 CRTAPO75718 401 aaPredicted RBP10.78□□□□□ -0.68
CXCR4-203ENST00000466288 APELAP0DMC3 54 aa10.78□□□□□ -0.68
CXCR4-203ENST00000466288 RPS27AP62979 156 aaKnown RBP10.78□□□□□ -0.68
CXCR4-203ENST00000466288 CDNFQ49AH0 187 aa10.78□□□□□ -0.68
CXCR4-203ENST00000466288 ZNF880Q6PDB4 577 aa10.78□□□□□ -0.68
CXCR4-203ENST00000466288 ADAD2Q8NCV1 583 aaKnown RBP10.78□□□□□ -0.68
CXCR4-203ENST00000466288 ASB13Q8WXK3 278 aa10.78□□□□□ -0.68
CXCR4-203ENST00000466288 PRRT1Q99946 306 aa10.78□□□□□ -0.68
CXCR4-203ENST00000466288 ANAPC10Q9UM13 185 aa10.78□□□□□ -0.68
CXCR4-203ENST00000466288 TP53TG1Q9Y2A0 90 aa10.78□□□□□ -0.68
CXCR4-203ENST00000466288 TRAV6A0A075B6T7 132 aa10.77□□□□□ -0.69
CXCR4-203ENST00000466288 DISC1C4P0D8 188 aa10.77□□□□□ -0.69
CXCR4-203ENST00000466288 RAB3DO95716 219 aa10.77□□□□□ -0.69
CXCR4-203ENST00000466288 C1QBP02746 253 aa10.77□□□□□ -0.69
CXCR4-203ENST00000466288 HIST1H1DP16402 221 aaKnown RBP10.77□□□□□ -0.69
CXCR4-203ENST00000466288 NAT1P18440 290 aa10.77□□□□□ -0.69
CXCR4-203ENST00000466288 BMI1P35226 326 aa10.77□□□□□ -0.69
CXCR4-203ENST00000466288 CCR6P51684 374 aa10.77□□□□□ -0.69
CXCR4-203ENST00000466288 PRR20EP86478 221 aa10.77□□□□□ -0.69
CXCR4-203ENST00000466288 PRR20CP86479 221 aa10.77□□□□□ -0.69
CXCR4-203ENST00000466288 PRR20DP86480 221 aa10.77□□□□□ -0.69
CXCR4-203ENST00000466288 PRR20BP86481 221 aa10.77□□□□□ -0.69
CXCR4-203ENST00000466288 PRR20AP86496 221 aa10.77□□□□□ -0.69
CXCR4-203ENST00000466288 CD300CQ08708 224 aa10.77□□□□□ -0.69
CXCR4-203ENST00000466288 EXOSC2Q13868 293 aaKnown RBP10.77□□□□□ -0.69
CXCR4-203ENST00000466288 OR4C16Q8NGL9 310 aa10.77□□□□□ -0.69
CXCR4-203ENST00000466288 PHLDA1Q8WV24 401 aaPredicted RBP10.77□□□□□ -0.69
CXCR4-203ENST00000466288 RAB3CQ96E17 227 aa10.77□□□□□ -0.69
CXCR4-203ENST00000466288 PAIP2BQ9ULR5 123 aaKnown RBP10.77□□□□□ -0.69
CXCR4-203ENST00000466288 DMRT1Q9Y5R6 373 aa10.77□□□□□ -0.69
CXCR4-203ENST00000466288 SELENOKQ9Y6D0 94 aa10.77□□□□□ -0.69
CXCR4-203ENST00000466288 PKD1P98161 4303 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms