RNA–Protein interactions for RNA: ENST00000466048.6

USP54-210, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 5

Gene USP54, Length 4,674 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-210ENST00000466048 SOD3P08294 240 aa6.49□□□□□ -1.37
USP54-210ENST00000466048 ZNF735P0CB33 412 aa6.49□□□□□ -1.37
USP54-210ENST00000466048 TCL1AP56279 114 aa6.49□□□□□ -1.37
USP54-210ENST00000466048 KLF14Q8TD94 323 aaPredicted RBP6.49□□□□□ -1.37
USP54-210ENST00000466048 ZNF835Q9Y2P0 537 aa6.49□□□□□ -1.37
USP54-210ENST00000466048 DNAJC13O75165 2243 aa6.48□□□□□ -1.37
USP54-210ENST00000466048 DOCK10Q96BY6 2186 aa6.48□□□□□ -1.37
USP54-210ENST00000466048 OOEPA6NGQ2 149 aa6.48□□□□□ -1.37
USP54-210ENST00000466048 H0YL77 283 aa6.48□□□□□ -1.37
USP54-210ENST00000466048 CEACAM8P31997 349 aaPredicted RBP6.48□□□□□ -1.37
USP54-210ENST00000466048 BIVMQ86UB2 503 aa6.48□□□□□ -1.37
USP54-210ENST00000466048 GCSAMQ8N6F7 178 aa6.48□□□□□ -1.37
USP54-210ENST00000466048 ADAD2Q8NCV1 583 aaKnown RBP6.48□□□□□ -1.37
USP54-210ENST00000466048 VSTM2AQ8TAG5 236 aa6.48□□□□□ -1.37
USP54-210ENST00000466048 NUDT11Q96G61 164 aa6.48□□□□□ -1.37
USP54-210ENST00000466048 PRORYQ9H606 182 aa6.48□□□□□ -1.37
USP54-210ENST00000466048 DIDO1Q9BTC0 2240 aaKnown RBP6.48□□□□□ -1.37
USP54-210ENST00000466048 OTOGLQ3ZCN5 2332 aa6.48□□□□□ -1.37
USP54-210ENST00000466048 IGHV2OR16-5A0A0B4J2B6 119 aa6.48□□□□□ -1.37
USP54-210ENST00000466048 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP6.48□□□□□ -1.37
USP54-210ENST00000466048 M0QZ24 198 aa6.48□□□□□ -1.37
USP54-210ENST00000466048 TMPRSS2O15393 492 aa6.48□□□□□ -1.37
USP54-210ENST00000466048 RBM11P57052 281 aaKnown RBP6.48□□□□□ -1.37
USP54-210ENST00000466048 BSPH1Q075Z2 132 aa6.48□□□□□ -1.37
USP54-210ENST00000466048 FGFBP3Q8TAT2 258 aa6.48□□□□□ -1.37
USP54-210ENST00000466048 LAMTOR2Q9Y2Q5 125 aa6.48□□□□□ -1.37
USP54-210ENST00000466048 NCOR2Q9Y618 2525 aa6.48□□□□□ -1.37
USP54-210ENST00000466048 PCSK5Q92824 1860 aa6.48□□□□□ -1.37
USP54-210ENST00000466048 FAM221AA4D161 298 aa6.48□□□□□ -1.37
USP54-210ENST00000466048 SPRY1O43609 319 aaPredicted RBP6.48□□□□□ -1.37
USP54-210ENST00000466048 CAMPP49913 170 aa6.48□□□□□ -1.37
USP54-210ENST00000466048 SRSF7Q16629 238 aaKnown RBP eCLIP6.48□□□□□ -1.37
USP54-210ENST00000466048 PSMG3Q9BT73 122 aaPredicted RBP6.48□□□□□ -1.37
USP54-210ENST00000466048 ZNF256Q9Y2P7 627 aaPredicted RBP6.48□□□□□ -1.37
USP54-210ENST00000466048 NUDT3O95989 172 aa6.47□□□□□ -1.37
USP54-210ENST00000466048 ORM1P02763 201 aa6.47□□□□□ -1.37
USP54-210ENST00000466048 PRSS1P07477 247 aa6.47□□□□□ -1.37
USP54-210ENST00000466048 KIR2DL2P43627 348 aaPredicted RBP6.47□□□□□ -1.37
USP54-210ENST00000466048 RNFT1Q5M7Z0 435 aa6.47□□□□□ -1.37
USP54-210ENST00000466048 FAM216AQ8WUB2 273 aa6.47□□□□□ -1.37
USP54-210ENST00000466048 PERPQ96FX8 193 aa6.47□□□□□ -1.37
USP54-210ENST00000466048 TIMM9Q9Y5J7 89 aa6.47□□□□□ -1.37
USP54-210ENST00000466048 A0A0A6YYD4 124 aa6.47□□□□□ -1.37
USP54-210ENST00000466048 MARCH11A6NNE9 402 aa6.47□□□□□ -1.37
USP54-210ENST00000466048 NCBP2LA6PVI3 153 aaKnown RBP6.47□□□□□ -1.37
USP54-210ENST00000466048 PPYP01298 95 aa6.47□□□□□ -1.37
USP54-210ENST00000466048 GPX4P36969 197 aaPredicted RBP6.47□□□□□ -1.37
USP54-210ENST00000466048 TMEM50BP56557 158 aa6.47□□□□□ -1.37
USP54-210ENST00000466048 FGF12P61328 243 aa6.47□□□□□ -1.37
USP54-210ENST00000466048 CCL8P80075 99 aa6.47□□□□□ -1.37
USP54-210ENST00000466048 CYP2G1PQ6ZSU1 146 aa6.47□□□□□ -1.37
USP54-210ENST00000466048 TBC1D26Q86UD7 250 aa6.47□□□□□ -1.37
USP54-210ENST00000466048 ITLN1Q8WWA0 313 aa6.47□□□□□ -1.37
USP54-210ENST00000466048 TMEM56Q96MV1 263 aa6.47□□□□□ -1.37
USP54-210ENST00000466048 MRPL18Q9H0U6 180 aaKnown RBP6.47□□□□□ -1.37
USP54-210ENST00000466048 PLSCR2Q9NRY7 297 aa6.47□□□□□ -1.37
USP54-210ENST00000466048 SLC25A10Q9UBX3 287 aaPredicted RBP6.47□□□□□ -1.37
USP54-210ENST00000466048 DPRXA6NFQ7 191 aa6.47□□□□□ -1.37
USP54-210ENST00000466048 A8MWL6 223 aa6.47□□□□□ -1.37
USP54-210ENST00000466048 CDIPTO14735 213 aa6.47□□□□□ -1.37
USP54-210ENST00000466048 OR5A1Q8NGJ0 315 aa6.47□□□□□ -1.37
USP54-210ENST00000466048 MRPL37Q9BZE1 423 aaKnown RBP6.47□□□□□ -1.37
USP54-210ENST00000466048 FOXI3A8MTJ6 420 aaPredicted RBP6.47□□□□□ -1.37
USP54-210ENST00000466048 FAM90A26D6RGX4 464 aa6.47□□□□□ -1.37
USP54-210ENST00000466048 F2RL2O00254 374 aa6.47□□□□□ -1.37
USP54-210ENST00000466048 SPINK4O60575 86 aa6.47□□□□□ -1.37
USP54-210ENST00000466048 LEPROTL1O95214 131 aa6.47□□□□□ -1.37
USP54-210ENST00000466048 SLC25A5P05141 298 aaKnown RBP6.47□□□□□ -1.37
USP54-210ENST00000466048 LINC00869P0C866 280 aa6.47□□□□□ -1.37
USP54-210ENST00000466048 SLC25A16P16260 332 aa6.47□□□□□ -1.37
USP54-210ENST00000466048 PSMB2P49721 201 aa6.47□□□□□ -1.37
USP54-210ENST00000466048 RPS16P62249 146 aaKnown RBP6.47□□□□□ -1.37
USP54-210ENST00000466048 HGFACQ04756 655 aa6.47□□□□□ -1.37
USP54-210ENST00000466048 TMEM136Q6ZRR5 245 aa6.47□□□□□ -1.37
USP54-210ENST00000466048 PNKDQ8N490 385 aa6.47□□□□□ -1.37
USP54-210ENST00000466048 OR5P3Q8WZ94 311 aa6.47□□□□□ -1.37
USP54-210ENST00000466048 AAMDCQ9H7C9 122 aa6.47□□□□□ -1.37
USP54-210ENST00000466048 HES4Q9HCC6 221 aa6.47□□□□□ -1.37
USP54-210ENST00000466048 TMEM242Q9NWH2 141 aa6.47□□□□□ -1.37
USP54-210ENST00000466048 ARID1AO14497 2285 aa6.46□□□□□ -1.37
USP54-210ENST00000466048 A0A0G2JNJ9 132 aa6.46□□□□□ -1.37
USP54-210ENST00000466048 CEACAM18A8MTB9 384 aa6.46□□□□□ -1.37
USP54-210ENST00000466048 S1PR2O95136 353 aa6.46□□□□□ -1.37
USP54-210ENST00000466048 P01737 135 aa6.46□□□□□ -1.37
USP54-210ENST00000466048 ESPL1Q14674 2120 aa6.46□□□□□ -1.37
USP54-210ENST00000466048 LYZL2Q7Z4W2 148 aa6.46□□□□□ -1.37
USP54-210ENST00000466048 C1QL2Q7Z5L3 287 aa6.46□□□□□ -1.37
USP54-210ENST00000466048 TMEM116Q8NCL8 245 aa6.46□□□□□ -1.37
USP54-210ENST00000466048 NUP37Q8NFH4 326 aa6.46□□□□□ -1.37
USP54-210ENST00000466048 Q9UFV3 132 aa6.46□□□□□ -1.37
USP54-210ENST00000466048 C5orf63A6NC05 138 aa6.46□□□□□ -1.38
USP54-210ENST00000466048 COLCA2A8K830 154 aa6.46□□□□□ -1.38
USP54-210ENST00000466048 F8VVB4 439 aa6.46□□□□□ -1.38
USP54-210ENST00000466048 F8VWA3 439 aa6.46□□□□□ -1.38
USP54-210ENST00000466048 COX7A1P24310 79 aa6.46□□□□□ -1.38
USP54-210ENST00000466048 PRDX2P32119 198 aa6.46□□□□□ -1.38
USP54-210ENST00000466048 FBLN7Q53RD9 439 aa6.46□□□□□ -1.38
USP54-210ENST00000466048 MRPL54Q6P161 138 aaKnown RBP6.46□□□□□ -1.38
USP54-210ENST00000466048 TNFRSF19Q9NS68 423 aa6.46□□□□□ -1.38
USP54-210ENST00000466048 CACNA1AO00555 2505 aa6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 488.8 ms