RNA–Protein interactions for RNA: ENST00000465871.1

SSB-207, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 3

Gene SSB, Length 421 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-207ENST00000465871 TGIF2-C20orf24A0A0A6YYL0 155 aa0.83□□□□□ -2.28
SSB-207ENST00000465871 IGHV1-18A0A0C4DH31 117 aa0.83□□□□□ -2.28
SSB-207ENST00000465871 GGT3PA6NGU5 568 aa0.83□□□□□ -2.28
SSB-207ENST00000465871 HMSDA8MTL9 139 aa0.83□□□□□ -2.28
SSB-207ENST00000465871 A8MUN3 132 aa0.83□□□□□ -2.28
SSB-207ENST00000465871 ZNF705FA8MVS1 300 aaPredicted RBP0.83□□□□□ -2.28
SSB-207ENST00000465871 H7C2G1 150 aa0.83□□□□□ -2.28
SSB-207ENST00000465871 LST1O00453 97 aa0.83□□□□□ -2.28
SSB-207ENST00000465871 LEPROTO15243 131 aa0.83□□□□□ -2.28
SSB-207ENST00000465871 ORC5O43913 435 aa0.83□□□□□ -2.28
SSB-207ENST00000465871 DCTN3O75935 186 aa0.83□□□□□ -2.28
SSB-207ENST00000465871 LGALS1P09382 135 aaKnown RBP0.83□□□□□ -2.28
SSB-207ENST00000465871 HLA-DMBP28068 263 aa0.83□□□□□ -2.28
SSB-207ENST00000465871 MAGEA12P43365 314 aa0.83□□□□□ -2.28
SSB-207ENST00000465871 EMP1P54849 157 aa0.83□□□□□ -2.28
SSB-207ENST00000465871 POLR2GP62487 172 aaKnown RBP eCLIP0.83□□□□□ -2.28
SSB-207ENST00000465871 EMX1Q04741 257 aaPredicted RBP0.83□□□□□ -2.28
SSB-207ENST00000465871 ITGB3BPQ13352 177 aaPredicted RBP0.83□□□□□ -2.28
SSB-207ENST00000465871 TNFAIP8L3Q5GJ75 292 aa0.83□□□□□ -2.28
SSB-207ENST00000465871 CD200R1LQ6Q8B3 271 aa0.83□□□□□ -2.28
SSB-207ENST00000465871 SLC36A1Q7Z2H8 476 aa0.83□□□□□ -2.28
SSB-207ENST00000465871 ZNF550Q7Z398 422 aa0.83□□□□□ -2.28
SSB-207ENST00000465871 OR2T4Q8NH00 348 aa0.83□□□□□ -2.28
SSB-207ENST00000465871 ZNF563Q8TA94 476 aa0.83□□□□□ -2.28
SSB-207ENST00000465871 RNF133Q8WVZ7 376 aa0.83□□□□□ -2.28
SSB-207ENST00000465871 ASB17Q8WXJ9 295 aa0.83□□□□□ -2.28
SSB-207ENST00000465871 ANKRD7Q92527 254 aa0.83□□□□□ -2.28
SSB-207ENST00000465871 PTH2Q96A98 100 aa0.83□□□□□ -2.28
SSB-207ENST00000465871 ARL5BQ96KC2 179 aa0.83□□□□□ -2.28
SSB-207ENST00000465871 CNBD2Q96M20 576 aa0.83□□□□□ -2.28
SSB-207ENST00000465871 MRPL32Q9BYC8 188 aaKnown RBP0.83□□□□□ -2.28
SSB-207ENST00000465871 CST9LQ9H4G1 147 aa0.83□□□□□ -2.28
SSB-207ENST00000465871 XPNPEP1Q9NQW7 623 aa0.83□□□□□ -2.28
SSB-207ENST00000465871 DOK5Q9P104 306 aa0.83□□□□□ -2.28
SSB-207ENST00000465871 TIMM22Q9Y584 194 aa0.83□□□□□ -2.28
SSB-207ENST00000465871 A0A0D9SEW6 157 aa0.82□□□□□ -2.28
SSB-207ENST00000465871 INMT-MINDY4F8WBC2 141 aa0.82□□□□□ -2.28
SSB-207ENST00000465871 NIPSNAP2O75323 286 aa0.82□□□□□ -2.28
SSB-207ENST00000465871 ZNF737O75373 536 aa0.82□□□□□ -2.28
SSB-207ENST00000465871 IFNA5P01569 189 aa0.82□□□□□ -2.28
SSB-207ENST00000465871 SRP19P09132 144 aaKnown RBP0.82□□□□□ -2.28
SSB-207ENST00000465871 LYNX1P0DP58 116 aa0.82□□□□□ -2.28
SSB-207ENST00000465871 MARCKSL1P49006 195 aa0.82□□□□□ -2.28
SSB-207ENST00000465871 EIF2B2P49770 351 aaKnown RBP0.82□□□□□ -2.28
SSB-207ENST00000465871 AQP4P55087 323 aa0.82□□□□□ -2.28
SSB-207ENST00000465871 MAGOHP61326 146 aaKnown RBP0.82□□□□□ -2.28
SSB-207ENST00000465871 HIST1H4AP62805 103 aaKnown RBP0.82□□□□□ -2.28
SSB-207ENST00000465871 TNFAIP6P98066 277 aaPredicted RBP0.82□□□□□ -2.28
SSB-207ENST00000465871 CAV1Q03135 178 aa0.82□□□□□ -2.28
SSB-207ENST00000465871 GRK1Q15835 563 aa0.82□□□□□ -2.28
SSB-207ENST00000465871 CCDC122Q5T0U0 273 aa0.82□□□□□ -2.28
SSB-207ENST00000465871 TMEM42Q69YG0 159 aa0.82□□□□□ -2.28
SSB-207ENST00000465871 PTRHD1Q6GMV3 140 aaKnown RBP0.82□□□□□ -2.28
SSB-207ENST00000465871 SPACA4Q8TDM5 124 aa0.82□□□□□ -2.28
SSB-207ENST00000465871 ROPN1LQ96C74 230 aa0.82□□□□□ -2.28
SSB-207ENST00000465871 GUCA1BQ9UMX6 200 aa0.82□□□□□ -2.28
SSB-207ENST00000465871 KDM5BQ9UGL1 1544 aa0.82□□□□□ -2.28
SSB-207ENST00000465871 EIF4G1Q04637 1599 aaKnown RBP0.82□□□□□ -2.28
SSB-207ENST00000465871 SLX4Q8IY92 1834 aa0.82□□□□□ -2.28
SSB-207ENST00000465871 FN1P02751 2386 aaKnown RBP0.82□□□□□ -2.28
SSB-207ENST00000465871 NYNRINQ9P2P1 1898 aaKnown RBP0.82□□□□□ -2.28
SSB-207ENST00000465871 C9orf84Q5VXU9 1444 aa0.81□□□□□ -2.28
SSB-207ENST00000465871 TRBV20OR9-2A0A075B6H5 130 aa0.81□□□□□ -2.28
SSB-207ENST00000465871 A0A1B0GV50 99 aa0.81□□□□□ -2.28
SSB-207ENST00000465871 SMIM23A6NLE4 172 aa0.81□□□□□ -2.28
SSB-207ENST00000465871 EEF1E1-BLOC1S5C9J1V9 151 aa0.81□□□□□ -2.28
SSB-207ENST00000465871 KCNK1O00180 336 aa0.81□□□□□ -2.28
SSB-207ENST00000465871 SLC22A1O15245 554 aa0.81□□□□□ -2.28
SSB-207ENST00000465871 NOS1APO75052 506 aaPredicted RBP0.81□□□□□ -2.28
SSB-207ENST00000465871 CRPP02741 224 aa0.81□□□□□ -2.28
SSB-207ENST00000465871 C1QCP02747 245 aa0.81□□□□□ -2.28
SSB-207ENST00000465871 SERPINA7P05543 415 aa0.81□□□□□ -2.28
SSB-207ENST00000465871 TRGC1P0CF51 173 aa0.81□□□□□ -2.28
SSB-207ENST00000465871 SULT1A3P0DMM9 295 aa0.81□□□□□ -2.28
SSB-207ENST00000465871 SULT1A4P0DMN0 295 aa0.81□□□□□ -2.28
SSB-207ENST00000465871 NKX2-5P52952 324 aaPredicted RBP0.81□□□□□ -2.28
SSB-207ENST00000465871 PMAIP1Q13794 54 aa0.81□□□□□ -2.28
SSB-207ENST00000465871 ACSM3Q53FZ2 586 aa0.81□□□□□ -2.28
SSB-207ENST00000465871 FAM201AQ5SY85 155 aa0.81□□□□□ -2.28
SSB-207ENST00000465871 GLT8D1Q68CQ7 371 aa0.81□□□□□ -2.28
SSB-207ENST00000465871 SFXN4Q6P4A7 337 aa0.81□□□□□ -2.28
SSB-207ENST00000465871 TMEM86AQ8N2M4 240 aa0.81□□□□□ -2.28
SSB-207ENST00000465871 RPP25LQ8N5L8 163 aaKnown RBP0.81□□□□□ -2.28
SSB-207ENST00000465871 DEFB125Q8N687 156 aa0.81□□□□□ -2.28
SSB-207ENST00000465871 OR1M1Q8NGA1 313 aa0.81□□□□□ -2.28
SSB-207ENST00000465871 GPR32P1Q8NGA4 272 aa0.81□□□□□ -2.28
SSB-207ENST00000465871 KLK6Q92876 244 aa0.81□□□□□ -2.28
SSB-207ENST00000465871 OR8D2Q9GZM6 311 aa0.81□□□□□ -2.28
SSB-207ENST00000465871 XAGE1AQ9HD64 81 aa0.81□□□□□ -2.28
SSB-207ENST00000465871 CMTM6Q9NX76 183 aa0.81□□□□□ -2.28
SSB-207ENST00000465871 UBAP1Q9NZ09 502 aa0.81□□□□□ -2.28
SSB-207ENST00000465871 FUT9Q9Y231 359 aa0.81□□□□□ -2.28
SSB-207ENST00000465871 NOSIPQ9Y314 301 aaKnown RBP0.81□□□□□ -2.28
SSB-207ENST00000465871 V9GYY5 206 aaPredicted RBP0.81□□□□□ -2.28
SSB-207ENST00000465871 RTTNQ86VV8 2226 aa0.81□□□□□ -2.28
SSB-207ENST00000465871 FLT4P35916 1363 aa0.81□□□□□ -2.28
SSB-207ENST00000465871 NAV1Q8NEY1 1877 aa0.8□□□□□ -2.28
SSB-207ENST00000465871 DICER1Q9UPY3 1922 aaKnown RBP0.8□□□□□ -2.28
SSB-207ENST00000465871 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP0.8□□□□□ -2.28
SSB-207ENST00000465871 A0A0J9YY10 115 aa0.8□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms