RNA–Protein interactions for RNA: ENST00000465505.2

SNX4-202, Transcript of sorting nexin 4, humanhuman

TSL 5

Gene SNX4, Length 591 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4-202ENST00000465505 ZNRF4Q8WWF5 429 aa2.59□□□□□ -1.99
SNX4-202ENST00000465505 RTN4IP1Q8WWV3 396 aaPredicted RBP2.59□□□□□ -1.99
SNX4-202ENST00000465505 PSMF1Q92530 271 aa2.59□□□□□ -1.99
SNX4-202ENST00000465505 FGF14Q92915 247 aa2.59□□□□□ -1.99
SNX4-202ENST00000465505 TSLPQ969D9 159 aa2.59□□□□□ -1.99
SNX4-202ENST00000465505 YPEL2Q96QA6 119 aa2.59□□□□□ -1.99
SNX4-202ENST00000465505 PYGO2Q9BRQ0 406 aa2.59□□□□□ -1.99
SNX4-202ENST00000465505 SNRNP25Q9BV90 132 aaKnown RBP2.59□□□□□ -1.99
SNX4-202ENST00000465505 TMEM191AQ9H0A3 160 aa2.59□□□□□ -1.99
SNX4-202ENST00000465505 JPT2Q9H910 190 aa2.59□□□□□ -1.99
SNX4-202ENST00000465505 EXOSC3Q9NQT5 275 aaKnown RBP2.59□□□□□ -1.99
SNX4-202ENST00000465505 TRMT112Q9UI30 125 aaKnown RBP2.59□□□□□ -1.99
SNX4-202ENST00000465505 PKIGQ9Y2B9 76 aa2.59□□□□□ -1.99
SNX4-202ENST00000465505 SOX21Q9Y651 276 aaPredicted RBP2.59□□□□□ -1.99
SNX4-202ENST00000465505 LINC00312Q9Y6C7 94 aa2.59□□□□□ -1.99
SNX4-202ENST00000465505 ARHGEF28Q8N1W1 1705 aaKnown RBP2.59□□□□□ -2
SNX4-202ENST00000465505 KIAA1210Q9ULL0 1709 aa2.59□□□□□ -2
SNX4-202ENST00000465505 TECPR2O15040 1411 aa2.59□□□□□ -2
SNX4-202ENST00000465505 PXDNQ92626 1479 aa2.58□□□□□ -2
SNX4-202ENST00000465505 TOP2BQ02880 1626 aa2.58□□□□□ -2
SNX4-202ENST00000465505 A0A087WWC5 75 aa2.58□□□□□ -2
SNX4-202ENST00000465505 TRAV26-2A0A0B4J265 109 aa2.58□□□□□ -2
SNX4-202ENST00000465505 FAM240AA0A1B0GVK7 77 aa2.58□□□□□ -2
SNX4-202ENST00000465505 TCRBV3S1A0A5B6 114 aa2.58□□□□□ -2
SNX4-202ENST00000465505 NCBP2LA6PVI3 153 aaKnown RBP2.58□□□□□ -2
SNX4-202ENST00000465505 H3BQ15 152 aa2.58□□□□□ -2
SNX4-202ENST00000465505 CCDC179H3BU77 68 aa2.58□□□□□ -2
SNX4-202ENST00000465505 CCL24O00175 119 aa2.58□□□□□ -2
SNX4-202ENST00000465505 RER1O15258 196 aa2.58□□□□□ -2
SNX4-202ENST00000465505 CD5LO43866 347 aa2.58□□□□□ -2
SNX4-202ENST00000465505 PGLYRP1O75594 196 aaPredicted RBP2.58□□□□□ -2
SNX4-202ENST00000465505 SNRNP200O75643 2136 aaKnown RBP2.58□□□□□ -2
SNX4-202ENST00000465505 IGLC6P0CF74 106 aa2.58□□□□□ -2
SNX4-202ENST00000465505 LAMP1P11279 417 aa2.58□□□□□ -2
SNX4-202ENST00000465505 NFYBP25208 207 aa2.58□□□□□ -2
SNX4-202ENST00000465505 PSMB8P28062 276 aa2.58□□□□□ -2
SNX4-202ENST00000465505 NDUFV3P56181 108 aaKnown RBP2.58□□□□□ -2
SNX4-202ENST00000465505 TAS2R46P59540 309 aa2.58□□□□□ -2
SNX4-202ENST00000465505 MYL5Q02045 173 aa2.58□□□□□ -2
SNX4-202ENST00000465505 ZNF92Q03936 586 aa2.58□□□□□ -2
SNX4-202ENST00000465505 SLC38A11Q08AI6 406 aa2.58□□□□□ -2
SNX4-202ENST00000465505 Q0VG73 95 aa2.58□□□□□ -2
SNX4-202ENST00000465505 NUMA1Q14980 2115 aa2.58□□□□□ -2
SNX4-202ENST00000465505 ZNF141Q15928 474 aa2.58□□□□□ -2
SNX4-202ENST00000465505 ZNF726P1Q15940 193 aa2.58□□□□□ -2
SNX4-202ENST00000465505 BATFQ16520 125 aa2.58□□□□□ -2
SNX4-202ENST00000465505 Q499Y3 187 aa2.58□□□□□ -2
SNX4-202ENST00000465505 TCEAL5Q5H9L2 206 aa2.58□□□□□ -2
SNX4-202ENST00000465505 Q6AWC8 147 aa2.58□□□□□ -2
SNX4-202ENST00000465505 FAM53AQ6NSI3 398 aaPredicted RBP2.58□□□□□ -2
SNX4-202ENST00000465505 UNQ5815/PRO19632Q6UWF5 114 aa2.58□□□□□ -2
SNX4-202ENST00000465505 TMEM14EPQ6UXP3 125 aa2.58□□□□□ -2
SNX4-202ENST00000465505 Q6ZRG5 221 aa2.58□□□□□ -2
SNX4-202ENST00000465505 Q75L30 129 aa2.58□□□□□ -2
SNX4-202ENST00000465505 TCF23Q7RTU1 214 aa2.58□□□□□ -2
SNX4-202ENST00000465505 P2RY8Q86VZ1 359 aa2.58□□□□□ -2
SNX4-202ENST00000465505 EXOC3-AS1Q8N2X6 119 aa2.58□□□□□ -2
SNX4-202ENST00000465505 KCNRGQ8N5I3 272 aa2.58□□□□□ -2
SNX4-202ENST00000465505 OR4B1Q8NGF8 309 aa2.58□□□□□ -2
SNX4-202ENST00000465505 OR8B12Q8NGG6 310 aa2.58□□□□□ -2
SNX4-202ENST00000465505 OR2A12Q8NGT7 310 aa2.58□□□□□ -2
SNX4-202ENST00000465505 MFSD8Q8NHS3 518 aa2.58□□□□□ -2
SNX4-202ENST00000465505 SLC25A40Q8TBP6 338 aa2.58□□□□□ -2
SNX4-202ENST00000465505 EMC6Q9BV81 110 aa2.58□□□□□ -2
SNX4-202ENST00000465505 C19orf24Q9BVV8 132 aa2.58□□□□□ -2
SNX4-202ENST00000465505 SFXN3Q9BWM7 321 aa2.58□□□□□ -2
SNX4-202ENST00000465505 TM2D1Q9BX74 207 aa2.58□□□□□ -2
SNX4-202ENST00000465505 PDFQ9HBH1 243 aa2.58□□□□□ -2
SNX4-202ENST00000465505 NPVFQ9HCQ7 196 aa2.58□□□□□ -2
SNX4-202ENST00000465505 ASF1BQ9NVP2 202 aa2.58□□□□□ -2
SNX4-202ENST00000465505 RNF186Q9NXI6 227 aa2.58□□□□□ -2
SNX4-202ENST00000465505 KCNIP1Q9NZI2 227 aa2.58□□□□□ -2
SNX4-202ENST00000465505 SLC2A6Q9UGQ3 507 aa2.58□□□□□ -2
SNX4-202ENST00000465505 LAMTOR3Q9UHA4 124 aa2.58□□□□□ -2
SNX4-202ENST00000465505 IL36AQ9UHA7 158 aa2.58□□□□□ -2
SNX4-202ENST00000465505 RGPD2P0DJD1 1756 aa2.58□□□□□ -2
SNX4-202ENST00000465505 DOCK1Q14185 1865 aa2.58□□□□□ -2
SNX4-202ENST00000465505 PTPRDP23468 1912 aa2.58□□□□□ -2
SNX4-202ENST00000465505 RAI1Q7Z5J4 1906 aaPredicted RBP2.58□□□□□ -2
SNX4-202ENST00000465505 ATG2BQ96BY7 2078 aa2.57□□□□□ -2
SNX4-202ENST00000465505 USP32Q8NFA0 1604 aa2.57□□□□□ -2
SNX4-202ENST00000465505 XRN1Q8IZH2 1706 aaKnown RBP2.57□□□□□ -2
SNX4-202ENST00000465505 RGPD3A6NKT7 1758 aaPredicted RBP2.57□□□□□ -2
SNX4-202ENST00000465505 ARFGEF2Q9Y6D5 1785 aa2.57□□□□□ -2
SNX4-202ENST00000465505 A0A0A6YYD4 124 aa2.57□□□□□ -2
SNX4-202ENST00000465505 LOC107984640A0A0U1RRK4 108 aa2.57□□□□□ -2
SNX4-202ENST00000465505 FAM183AA6NL82 134 aa2.57□□□□□ -2
SNX4-202ENST00000465505 MCRIP1C9JLW8 97 aa2.57□□□□□ -2
SNX4-202ENST00000465505 ZNF670-ZNF695F2Z2N8 137 aa2.57□□□□□ -2
SNX4-202ENST00000465505 J3QQQ9 107 aa2.57□□□□□ -2
SNX4-202ENST00000465505 K7EP34 96 aa2.57□□□□□ -2
SNX4-202ENST00000465505 SULT2B1O00204 365 aa2.57□□□□□ -2
SNX4-202ENST00000465505 BCL2L11O43521 198 aa2.57□□□□□ -2
SNX4-202ENST00000465505 GPR137BO60478 399 aa2.57□□□□□ -2
SNX4-202ENST00000465505 NPIPB7O75200 414 aa2.57□□□□□ -2
SNX4-202ENST00000465505 DPM2O94777 84 aa2.57□□□□□ -2
SNX4-202ENST00000465505 KRASP01116 189 aa2.57□□□□□ -2
SNX4-202ENST00000465505 SPINK8P0C7L1 97 aa2.57□□□□□ -2
SNX4-202ENST00000465505 SEC11BP0C7V7 166 aa2.57□□□□□ -2
SNX4-202ENST00000465505 PGA3P0DJD8 388 aa2.57□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms