RNA–Protein interactions for RNA: ENST00000465461.6

CUX1-207, Transcript of cut like homeobox 1, humanhuman

TSL 3

Gene CUX1, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-207ENST00000465461 ZNF486Q96H40 463 aaPredicted RBP9.06□□□□□ -0.96
CUX1-207ENST00000465461 PRRT1Q99946 306 aa9.06□□□□□ -0.96
CUX1-207ENST00000465461 COA4Q9NYJ1 87 aa9.06□□□□□ -0.96
CUX1-207ENST00000465461 PRR13Q9NZ81 148 aa9.06□□□□□ -0.96
CUX1-207ENST00000465461 COMMD9Q9P000 198 aa9.06□□□□□ -0.96
CUX1-207ENST00000465461 C14orf166Q9Y224 244 aaKnown RBP9.06□□□□□ -0.96
CUX1-207ENST00000465461 VSIG4Q9Y279 399 aa9.06□□□□□ -0.96
CUX1-207ENST00000465461 TRRAPQ9Y4A5 3859 aa9.05□□□□□ -0.96
CUX1-207ENST00000465461 DBX1A6NMT0 343 aa9.05□□□□□ -0.96
CUX1-207ENST00000465461 CREBL2O60519 120 aaPredicted RBP9.05□□□□□ -0.96
CUX1-207ENST00000465461 REG1AP05451 166 aa9.05□□□□□ -0.96
CUX1-207ENST00000465461 OR5AC1P0C628 307 aa9.05□□□□□ -0.96
CUX1-207ENST00000465461 AREGP15514 252 aa9.05□□□□□ -0.96
CUX1-207ENST00000465461 RAB25P57735 213 aa9.05□□□□□ -0.96
CUX1-207ENST00000465461 OR2B8PP59922 312 aa9.05□□□□□ -0.96
CUX1-207ENST00000465461 MRPL41Q8IXM3 137 aaKnown RBP9.05□□□□□ -0.96
CUX1-207ENST00000465461 CCDC71LQ8N9Z2 235 aa9.05□□□□□ -0.96
CUX1-207ENST00000465461 OR4A5Q8NH83 315 aa9.05□□□□□ -0.96
CUX1-207ENST00000465461 TMEM230Q96A57 120 aa9.05□□□□□ -0.96
CUX1-207ENST00000465461 SEC22AQ96IW7 307 aa9.05□□□□□ -0.96
CUX1-207ENST00000465461 UBE2E2Q96LR5 201 aa9.05□□□□□ -0.96
CUX1-207ENST00000465461 AIFM2Q9BRQ8 373 aa9.05□□□□□ -0.96
CUX1-207ENST00000465461 SLC2A8Q9NY64 477 aa9.05□□□□□ -0.96
CUX1-207ENST00000465461 SCP2D1Q9UJQ7 156 aa9.05□□□□□ -0.96
CUX1-207ENST00000465461 TEX13DA0A0J9YY54 714 aaPredicted RBP9.04□□□□□ -0.96
CUX1-207ENST00000465461 TEX50A0A1B0GTY4 177 aa9.04□□□□□ -0.96
CUX1-207ENST00000465461 G3V4G9 280 aa9.04□□□□□ -0.96
CUX1-207ENST00000465461 H0Y980 276 aa9.04□□□□□ -0.96
CUX1-207ENST00000465461 CCL24O00175 119 aa9.04□□□□□ -0.96
CUX1-207ENST00000465461 IGKV1-5P01602 117 aa9.04□□□□□ -0.96
CUX1-207ENST00000465461 SERPINE2P07093 398 aa9.04□□□□□ -0.96
CUX1-207ENST00000465461 IGLL1P15814 213 aa9.04□□□□□ -0.96
CUX1-207ENST00000465461 AKR1C4P17516 323 aa9.04□□□□□ -0.96
CUX1-207ENST00000465461 CD33P20138 364 aa9.04□□□□□ -0.96
CUX1-207ENST00000465461 MAS1LP35410 378 aa9.04□□□□□ -0.96
CUX1-207ENST00000465461 INPP1P49441 399 aa9.04□□□□□ -0.96
CUX1-207ENST00000465461 AP3S2P59780 193 aa9.04□□□□□ -0.96
CUX1-207ENST00000465461 ZNF45Q02386 682 aa9.04□□□□□ -0.96
CUX1-207ENST00000465461 TRIM16LQ309B1 348 aa9.04□□□□□ -0.96
CUX1-207ENST00000465461 OXLD1Q5BKU9 147 aa9.04□□□□□ -0.96
CUX1-207ENST00000465461 TRIQKQ629K1 86 aa9.04□□□□□ -0.96
CUX1-207ENST00000465461 LINC00482Q8N8I6 264 aa9.04□□□□□ -0.96
CUX1-207ENST00000465461 GDPD1Q8N9F7 314 aa9.04□□□□□ -0.96
CUX1-207ENST00000465461 OR11H1Q8NG94 326 aa9.04□□□□□ -0.96
CUX1-207ENST00000465461 OR10W1Q8NGF6 305 aa9.04□□□□□ -0.96
CUX1-207ENST00000465461 C4orf3Q8WVX3 66 aa9.04□□□□□ -0.96
CUX1-207ENST00000465461 P2RX4Q99571 388 aa9.04□□□□□ -0.96
CUX1-207ENST00000465461 SPIN2AQ99865 258 aa9.04□□□□□ -0.96
CUX1-207ENST00000465461 SPIN2BQ9BPZ2 258 aa9.04□□□□□ -0.96
CUX1-207ENST00000465461 A0A0G2JRQ6 117 aa9.03□□□□□ -0.96
CUX1-207ENST00000465461 I3L521 148 aa9.03□□□□□ -0.96
CUX1-207ENST00000465461 IL7P13232 177 aa9.03□□□□□ -0.96
CUX1-207ENST00000465461 CD40LGP29965 261 aa9.03□□□□□ -0.96
CUX1-207ENST00000465461 FAUP35544 74 aaKnown RBP9.03□□□□□ -0.96
CUX1-207ENST00000465461 MYCNOSP40205 109 aa9.03□□□□□ -0.96
CUX1-207ENST00000465461 ECI1P42126 302 aa9.03□□□□□ -0.96
CUX1-207ENST00000465461 CCR6P51684 374 aa9.03□□□□□ -0.96
CUX1-207ENST00000465461 SURF2Q15527 256 aaPredicted RBP9.03□□□□□ -0.96
CUX1-207ENST00000465461 H2BFWTQ7Z2G1 175 aa9.03□□□□□ -0.96
CUX1-207ENST00000465461 TMED4Q7Z7H5 227 aa9.03□□□□□ -0.96
CUX1-207ENST00000465461 TTC9CQ8N5M4 171 aa9.03□□□□□ -0.96
CUX1-207ENST00000465461 OR1N2Q8NGR9 330 aa9.03□□□□□ -0.96
CUX1-207ENST00000465461 LHFPL5Q8TAF8 219 aa9.03□□□□□ -0.96
CUX1-207ENST00000465461 TMEM68Q96MH6 324 aa9.03□□□□□ -0.96
CUX1-207ENST00000465461 HINT2Q9BX68 163 aa9.03□□□□□ -0.96
CUX1-207ENST00000465461 COMMD5Q9GZQ3 224 aa9.03□□□□□ -0.96
CUX1-207ENST00000465461 NAA60Q9H7X0 242 aa9.03□□□□□ -0.96
CUX1-207ENST00000465461 AKIP1Q9NQ31 210 aa9.03□□□□□ -0.96
CUX1-207ENST00000465461 OR51B2Q9Y5P1 312 aa9.03□□□□□ -0.96
CUX1-207ENST00000465461 IGHV4OR15-8A0A075B7B6 117 aa9.02□□□□□ -0.97
CUX1-207ENST00000465461 A0A087WW49 117 aa9.02□□□□□ -0.97
CUX1-207ENST00000465461 ANKRD34BA5PLL1 514 aa9.02□□□□□ -0.97
CUX1-207ENST00000465461 CRYM-AS1A6NIL9 109 aa9.02□□□□□ -0.97
CUX1-207ENST00000465461 SNAPC5O75971 98 aa9.02□□□□□ -0.97
CUX1-207ENST00000465461 OR2J3O76001 311 aa9.02□□□□□ -0.97
CUX1-207ENST00000465461 UCP1P25874 307 aa9.02□□□□□ -0.97
CUX1-207ENST00000465461 SPINK9Q5DT21 86 aa9.02□□□□□ -0.97
CUX1-207ENST00000465461 GLYATL2Q8WU03 294 aa9.02□□□□□ -0.97
CUX1-207ENST00000465461 QTRT1Q9BXR0 403 aaKnown RBP9.02□□□□□ -0.97
CUX1-207ENST00000465461 SLA2Q9H6Q3 261 aa9.02□□□□□ -0.97
CUX1-207ENST00000465461 FAM212BQ9NTI7 297 aaPredicted RBP9.02□□□□□ -0.97
CUX1-207ENST00000465461 S4R3C0 116 aa9.02□□□□□ -0.97
CUX1-207ENST00000465461 C13orf42A0A1B0GVH6 325 aa9.01□□□□□ -0.97
CUX1-207ENST00000465461 IGLC7A0M8Q6 106 aa9.01□□□□□ -0.97
CUX1-207ENST00000465461 H3BUA1 57 aa9.01□□□□□ -0.97
CUX1-207ENST00000465461 IGHV3-23P01764 117 aa9.01□□□□□ -0.97
CUX1-207ENST00000465461 LGALS1P09382 135 aaKnown RBP9.01□□□□□ -0.97
CUX1-207ENST00000465461 TRAPPC2P0DI81 140 aa9.01□□□□□ -0.97
CUX1-207ENST00000465461 TRAPPC2BP0DI82 140 aa9.01□□□□□ -0.97
CUX1-207ENST00000465461 PSMB6P28072 239 aa9.01□□□□□ -0.97
CUX1-207ENST00000465461 AKR1C2P52895 323 aa9.01□□□□□ -0.97
CUX1-207ENST00000465461 SLURP1P55000 103 aa9.01□□□□□ -0.97
CUX1-207ENST00000465461 SUPT4H1P63272 117 aaKnown RBP9.01□□□□□ -0.97
CUX1-207ENST00000465461 RHOGP84095 191 aa9.01□□□□□ -0.97
CUX1-207ENST00000465461 SELENOHQ8IZQ5 122 aaKnown RBP9.01□□□□□ -0.97
CUX1-207ENST00000465461 WFDC9Q8NEX5 89 aa9.01□□□□□ -0.97
CUX1-207ENST00000465461 OR4A16Q8NH70 328 aa9.01□□□□□ -0.97
CUX1-207ENST00000465461 TMEM222Q9H0R3 208 aa9.01□□□□□ -0.97
CUX1-207ENST00000465461 BATF3Q9NR55 127 aa9.01□□□□□ -0.97
CUX1-207ENST00000465461 FLVCR2Q9UPI3 526 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms