RNA–Protein interactions for RNA: ENST00000465457.1

HDAC6-215, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 563 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-215ENST00000465457 SEC11BP0C7V7 166 aa11.16□□□□□ -0.62
HDAC6-215ENST00000465457 IGHV1-8P0DP01 117 aa11.16□□□□□ -0.62
HDAC6-215ENST00000465457 CCL3L1P16619 93 aa11.16□□□□□ -0.62
HDAC6-215ENST00000465457 GNG10P50151 68 aa11.16□□□□□ -0.62
HDAC6-215ENST00000465457 ZNF137PP52743 207 aa11.16□□□□□ -0.62
HDAC6-215ENST00000465457 UBE2KP61086 200 aa11.16□□□□□ -0.62
HDAC6-215ENST00000465457 POU2AF1Q16633 256 aa11.16□□□□□ -0.62
HDAC6-215ENST00000465457 COMMD7Q86VX2 200 aa11.16□□□□□ -0.62
HDAC6-215ENST00000465457 ODF3L1Q8IXM7 274 aa11.16□□□□□ -0.62
HDAC6-215ENST00000465457 OR52E5Q8NH55 327 aa11.16□□□□□ -0.62
HDAC6-215ENST00000465457 LEAP2Q969E1 77 aa11.16□□□□□ -0.62
HDAC6-215ENST00000465457 SAT2Q96F10 170 aaPredicted RBP11.16□□□□□ -0.62
HDAC6-215ENST00000465457 CLCC1Q96S66 551 aa11.16□□□□□ -0.62
HDAC6-215ENST00000465457 DOCK11Q5JSL3 2073 aa11.15□□□□□ -0.62
HDAC6-215ENST00000465457 FAM24AA6NFZ4 105 aa11.15□□□□□ -0.62
HDAC6-215ENST00000465457 G3V4G9 280 aa11.15□□□□□ -0.62
HDAC6-215ENST00000465457 FGF16O43320 207 aa11.15□□□□□ -0.62
HDAC6-215ENST00000465457 HOXA3O43365 443 aaPredicted RBP11.15□□□□□ -0.62
HDAC6-215ENST00000465457 TXNL1O43396 289 aa11.15□□□□□ -0.62
HDAC6-215ENST00000465457 FCN3O75636 299 aa11.15□□□□□ -0.62
HDAC6-215ENST00000465457 MMP23AO75900 390 aa11.15□□□□□ -0.62
HDAC6-215ENST00000465457 RAB5CP51148 216 aa11.15□□□□□ -0.62
HDAC6-215ENST00000465457 ZNF841Q6ZN19 808 aa11.15□□□□□ -0.62
HDAC6-215ENST00000465457 OR1S2Q8NGQ3 325 aa11.15□□□□□ -0.62
HDAC6-215ENST00000465457 OR10X1Q8NGY0 326 aa11.15□□□□□ -0.62
HDAC6-215ENST00000465457 TSNAXQ99598 290 aaKnown RBP11.15□□□□□ -0.62
HDAC6-215ENST00000465457 GINS3Q9BRX5 216 aa11.15□□□□□ -0.62
HDAC6-215ENST00000465457 PCGF1Q9BSM1 259 aa11.15□□□□□ -0.62
HDAC6-215ENST00000465457 TMEM133Q9H2Q1 129 aa11.15□□□□□ -0.62
HDAC6-215ENST00000465457 PSENENQ9NZ42 101 aa11.15□□□□□ -0.62
HDAC6-215ENST00000465457 COL7A1Q02388 2944 aa11.15□□□□□ -0.63
HDAC6-215ENST00000465457 DNAH3Q8TD57 4116 aa11.15□□□□□ -0.63
HDAC6-215ENST00000465457 LEUTXA8MZ59 168 aa11.14□□□□□ -0.63
HDAC6-215ENST00000465457 J3QR06 171 aa11.14□□□□□ -0.63
HDAC6-215ENST00000465457 RBMXL2O75526 392 aaKnown RBP11.14□□□□□ -0.63
HDAC6-215ENST00000465457 LIPFP07098 398 aa11.14□□□□□ -0.63
HDAC6-215ENST00000465457 RAB13P51153 203 aa11.14□□□□□ -0.63
HDAC6-215ENST00000465457 PRRX1P54821 245 aa11.14□□□□□ -0.63
HDAC6-215ENST00000465457 PAX9P55771 341 aa11.14□□□□□ -0.63
HDAC6-215ENST00000465457 SPCS3P61009 180 aa11.14□□□□□ -0.63
HDAC6-215ENST00000465457 RPP30P78346 268 aaKnown RBP11.14□□□□□ -0.63
HDAC6-215ENST00000465457 BEAN1Q3B7T3 259 aa11.14□□□□□ -0.63
HDAC6-215ENST00000465457 WDR25Q64LD2 544 aaPredicted RBP11.14□□□□□ -0.63
HDAC6-215ENST00000465457 ZNF429Q86V71 674 aa11.14□□□□□ -0.63
HDAC6-215ENST00000465457 LY6G5BQ8NDX9 201 aa11.14□□□□□ -0.63
HDAC6-215ENST00000465457 OR4A16Q8NH70 328 aa11.14□□□□□ -0.63
HDAC6-215ENST00000465457 OSR1Q8TAX0 266 aaPredicted RBP11.14□□□□□ -0.63
HDAC6-215ENST00000465457 FAM110DQ8TAY7 271 aaPredicted RBP11.14□□□□□ -0.63
HDAC6-215ENST00000465457 TMED6Q8WW62 240 aa11.14□□□□□ -0.63
HDAC6-215ENST00000465457 GNPNAT1Q96EK6 184 aaPredicted RBP11.14□□□□□ -0.63
HDAC6-215ENST00000465457 ATP5SQ99766 215 aa11.14□□□□□ -0.63
HDAC6-215ENST00000465457 MS4A7Q9GZW8 240 aaPredicted RBP11.14□□□□□ -0.63
HDAC6-215ENST00000465457 PATZ1Q9HBE1 687 aaKnown RBP11.14□□□□□ -0.63
HDAC6-215ENST00000465457 SLC35D1Q9NTN3 355 aa11.14□□□□□ -0.63
HDAC6-215ENST00000465457 C1RLQ9NZP8 487 aa11.14□□□□□ -0.63
HDAC6-215ENST00000465457 AMMECR1Q9Y4X0 333 aaPredicted RBP11.14□□□□□ -0.63
HDAC6-215ENST00000465457 NOTCH3Q9UM47 2321 aa11.13□□□□□ -0.63
HDAC6-215ENST00000465457 PPIAL4CA0A0B4J2A2 164 aa11.13□□□□□ -0.63
HDAC6-215ENST00000465457 TMEM50AO95807 157 aa11.13□□□□□ -0.63
HDAC6-215ENST00000465457 IGHV3-7P01780 117 aa11.13□□□□□ -0.63
HDAC6-215ENST00000465457 PPIAL4GP0DN37 164 aa11.13□□□□□ -0.63
HDAC6-215ENST00000465457 MC5RP33032 325 aa11.13□□□□□ -0.63
HDAC6-215ENST00000465457 ERVFRD-1P60508 538 aa11.13□□□□□ -0.63
HDAC6-215ENST00000465457 GNB2P62879 340 aa11.13□□□□□ -0.63
HDAC6-215ENST00000465457 BLOC1S1P78537 153 aa11.13□□□□□ -0.63
HDAC6-215ENST00000465457 NHLH2Q02577 135 aa11.13□□□□□ -0.63
HDAC6-215ENST00000465457 HSD17B13Q7Z5P4 300 aaPredicted RBP11.13□□□□□ -0.63
HDAC6-215ENST00000465457 PDPNQ86YL7 162 aa11.13□□□□□ -0.63
HDAC6-215ENST00000465457 EIF4E3Q8N5X7 224 aaKnown RBP11.13□□□□□ -0.63
HDAC6-215ENST00000465457 ZNF383Q8NA42 475 aa11.13□□□□□ -0.63
HDAC6-215ENST00000465457 OR5C1Q8NGR4 320 aa11.13□□□□□ -0.63
HDAC6-215ENST00000465457 DTD1Q8TEA8 209 aa11.13□□□□□ -0.63
HDAC6-215ENST00000465457 CITED4Q96RK1 184 aa11.13□□□□□ -0.63
HDAC6-215ENST00000465457 PARD6GQ9BYG4 376 aaPredicted RBP11.13□□□□□ -0.63
HDAC6-215ENST00000465457 SMIM3Q9BZL3 60 aa11.13□□□□□ -0.63
HDAC6-215ENST00000465457 RBKSQ9H477 322 aa11.13□□□□□ -0.63
HDAC6-215ENST00000465457 INSIG2Q9Y5U4 225 aa11.13□□□□□ -0.63
HDAC6-215ENST00000465457 TET2Q6N021 2002 aaPredicted RBP11.13□□□□□ -0.63
HDAC6-215ENST00000465457 EPPK1P58107 5090 aaKnown RBP11.12□□□□□ -0.63
HDAC6-215ENST00000465457 TRAV40A0A0B4J280 105 aa11.12□□□□□ -0.63
HDAC6-215ENST00000465457 A0A1W2PPE3 182 aa11.12□□□□□ -0.63
HDAC6-215ENST00000465457 ANKRD34BA5PLL1 514 aa11.12□□□□□ -0.63
HDAC6-215ENST00000465457 M0R1W7 72 aa11.12□□□□□ -0.63
HDAC6-215ENST00000465457 TIMM23O14925 209 aa11.12□□□□□ -0.63
HDAC6-215ENST00000465457 CRYZL1O95825 349 aa11.12□□□□□ -0.63
HDAC6-215ENST00000465457 IFNA5P01569 189 aa11.12□□□□□ -0.63
HDAC6-215ENST00000465457 FGF2P09038 288 aa11.12□□□□□ -0.63
HDAC6-215ENST00000465457 CT45A6P0DMU7 189 aa11.12□□□□□ -0.63
HDAC6-215ENST00000465457 CT45A5P0DMU8 189 aa11.12□□□□□ -0.63
HDAC6-215ENST00000465457 CT45A7P0DMV0 189 aa11.12□□□□□ -0.63
HDAC6-215ENST00000465457 SPP1P10451 314 aa11.12□□□□□ -0.63
HDAC6-215ENST00000465457 SULT1A2P50226 295 aa11.12□□□□□ -0.63
HDAC6-215ENST00000465457 ATP6V1FQ16864 119 aa11.12□□□□□ -0.63
HDAC6-215ENST00000465457 IZUMO4Q1ZYL8 232 aa11.12□□□□□ -0.63
HDAC6-215ENST00000465457 FAM74A1Q5RGS3 127 aa11.12□□□□□ -0.63
HDAC6-215ENST00000465457 PUSL1Q8N0Z8 303 aaKnown RBP11.12□□□□□ -0.63
HDAC6-215ENST00000465457 ABHD12Q8N2K0 398 aa11.12□□□□□ -0.63
HDAC6-215ENST00000465457 BEND2Q8NDZ0 799 aa11.12□□□□□ -0.63
HDAC6-215ENST00000465457 OR5AN1Q8NGI8 311 aa11.12□□□□□ -0.63
HDAC6-215ENST00000465457 VSTM2AQ8TAG5 236 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms