RNA–Protein interactions for RNA: ENST00000464867.1

APP-213, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best)

Gene APP, Length 816 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-213ENST00000464867 SMPXQ9UHP9 88 aa6.64□□□□□ -1.35
APP-213ENST00000464867 MGAT4AQ9UM21 535 aa6.64□□□□□ -1.35
APP-213ENST00000464867 HMCN2Q8NDA2 5059 aa6.64□□□□□ -1.35
APP-213ENST00000464867 ZAR1LA6NP61 321 aa6.63□□□□□ -1.35
APP-213ENST00000464867 C15orf62A8K5M9 175 aa6.63□□□□□ -1.35
APP-213ENST00000464867 TEX22C9J3V5 150 aa6.63□□□□□ -1.35
APP-213ENST00000464867 CYB5BO43169 146 aa6.63□□□□□ -1.35
APP-213ENST00000464867 REG1AP05451 166 aa6.63□□□□□ -1.35
APP-213ENST00000464867 GIG44P09565 113 aaPredicted RBP6.63□□□□□ -1.35
APP-213ENST00000464867 GNB3P16520 340 aa6.63□□□□□ -1.35
APP-213ENST00000464867 HOXB6P17509 224 aaKnown RBP6.63□□□□□ -1.35
APP-213ENST00000464867 PTBP1P26599 531 aaKnown RBP eCLIP6.63□□□□□ -1.35
APP-213ENST00000464867 RPL27AP46776 148 aaKnown RBP6.63□□□□□ -1.35
APP-213ENST00000464867 GBX2P52951 348 aaPredicted RBP6.63□□□□□ -1.35
APP-213ENST00000464867 EMP1P54849 157 aa6.63□□□□□ -1.35
APP-213ENST00000464867 CCL18P55774 89 aa6.63□□□□□ -1.35
APP-213ENST00000464867 IRF3Q14653 427 aa6.63□□□□□ -1.35
APP-213ENST00000464867 TTC32Q5I0X7 151 aa6.63□□□□□ -1.35
APP-213ENST00000464867 SIGIRRQ6IA17 410 aa6.63□□□□□ -1.35
APP-213ENST00000464867 TMEM88Q6PEY1 159 aa6.63□□□□□ -1.35
APP-213ENST00000464867 SPSB3Q6PJ21 355 aa6.63□□□□□ -1.35
APP-213ENST00000464867 ACBD7Q8N6N7 88 aa6.63□□□□□ -1.35
APP-213ENST00000464867 ZNRF2Q8NHG8 242 aa6.63□□□□□ -1.35
APP-213ENST00000464867 ADTRPQ96IZ2 230 aa6.63□□□□□ -1.35
APP-213ENST00000464867 NIPSNAP3BQ9BS92 247 aa6.63□□□□□ -1.35
APP-213ENST00000464867 RIMS4Q9H426 269 aaPredicted RBP6.63□□□□□ -1.35
APP-213ENST00000464867 GHRLQ9UBU3 117 aa6.63□□□□□ -1.35
APP-213ENST00000464867 FAT1Q14517 4588 aa6.62□□□□□ -1.35
APP-213ENST00000464867 IGLV11-55A0A075B6I3 123 aa6.62□□□□□ -1.35
APP-213ENST00000464867 IGHV3OR16-8A0A075B7F1 116 aa6.62□□□□□ -1.35
APP-213ENST00000464867 IGHV7-4-1A0A0J9YVY3 117 aa6.62□□□□□ -1.35
APP-213ENST00000464867 OR2T8A6NH00 312 aa6.62□□□□□ -1.35
APP-213ENST00000464867 CHEK1O14757 476 aa6.62□□□□□ -1.35
APP-213ENST00000464867 EIF4EP06730 217 aaKnown RBP6.62□□□□□ -1.35
APP-213ENST00000464867 SAA1P0DJI8 122 aaPredicted RBP6.62□□□□□ -1.35
APP-213ENST00000464867 AREGP15514 252 aa6.62□□□□□ -1.35
APP-213ENST00000464867 MAS1LP35410 378 aa6.62□□□□□ -1.35
APP-213ENST00000464867 DLK1P80370 383 aa6.62□□□□□ -1.35
APP-213ENST00000464867 TRPT1Q86TN4 253 aaKnown RBP6.62□□□□□ -1.35
APP-213ENST00000464867 SYS1Q8N2H4 156 aa6.62□□□□□ -1.35
APP-213ENST00000464867 OR8J1Q8NGP2 316 aa6.62□□□□□ -1.35
APP-213ENST00000464867 NRBF2Q96F24 287 aa6.62□□□□□ -1.35
APP-213ENST00000464867 BSCL2Q96G97 398 aaPredicted RBP6.62□□□□□ -1.35
APP-213ENST00000464867 C1QTNF4Q9BXJ3 329 aa6.62□□□□□ -1.35
APP-213ENST00000464867 OR2D2Q9H210 308 aa6.62□□□□□ -1.35
APP-213ENST00000464867 OR51E2Q9H255 320 aa6.62□□□□□ -1.35
APP-213ENST00000464867 SDHAF2Q9NX18 166 aa6.62□□□□□ -1.35
APP-213ENST00000464867 RDH8Q9NYR8 311 aa6.62□□□□□ -1.35
APP-213ENST00000464867 RBM7Q9Y580 266 aaKnown RBP6.62□□□□□ -1.35
APP-213ENST00000464867 SCGB1D2O95969 90 aa6.61□□□□□ -1.35
APP-213ENST00000464867 NAPSAO96009 420 aa6.61□□□□□ -1.35
APP-213ENST00000464867 IL6RP08887 468 aaPredicted RBP6.61□□□□□ -1.35
APP-213ENST00000464867 C4BPBP20851 252 aa6.61□□□□□ -1.35
APP-213ENST00000464867 DAPP51397 102 aa6.61□□□□□ -1.35
APP-213ENST00000464867 NUTF2P61970 127 aaKnown RBP6.61□□□□□ -1.35
APP-213ENST00000464867 HLA-DRB3P79483 266 aa6.61□□□□□ -1.35
APP-213ENST00000464867 KLK9Q2XQG4 91 aa6.61□□□□□ -1.35
APP-213ENST00000464867 ZNF880Q6PDB4 577 aa6.61□□□□□ -1.35
APP-213ENST00000464867 GSG1LQ6UXU4 331 aa6.61□□□□□ -1.35
APP-213ENST00000464867 CSNK1G2-AS1Q8NCQ2 148 aa6.61□□□□□ -1.35
APP-213ENST00000464867 OR6M1Q8NGM8 313 aa6.61□□□□□ -1.35
APP-213ENST00000464867 VSTM2AQ8TAG5 236 aa6.61□□□□□ -1.35
APP-213ENST00000464867 VN1R17PQ8TDU5 208 aa6.61□□□□□ -1.35
APP-213ENST00000464867 KLK9Q9UKQ9 250 aa6.61□□□□□ -1.35
APP-213ENST00000464867 TRBV5-7A0A0A0MS05 114 aa6.6□□□□□ -1.35
APP-213ENST00000464867 IGHV3-49A0A0A0MS15 119 aa6.6□□□□□ -1.35
APP-213ENST00000464867 SNTNA6NMZ2 147 aa6.6□□□□□ -1.35
APP-213ENST00000464867 YIF1AO95070 293 aa6.6□□□□□ -1.35
APP-213ENST00000464867 ZNF735P0CB33 412 aa6.6□□□□□ -1.35
APP-213ENST00000464867 SERPINB10P48595 397 aa6.6□□□□□ -1.35
APP-213ENST00000464867 TCF24Q7RTU0 167 aa6.6□□□□□ -1.35
APP-213ENST00000464867 C6orf201Q7Z4U5 140 aa6.6□□□□□ -1.35
APP-213ENST00000464867 LHFPL3Q86UP9 236 aa6.6□□□□□ -1.35
APP-213ENST00000464867 ARHGAP24Q8N264 748 aa6.6□□□□□ -1.35
APP-213ENST00000464867 DUSP18Q8NEJ0 188 aa6.6□□□□□ -1.35
APP-213ENST00000464867 DEFB104AQ8WTQ1 72 aa6.6□□□□□ -1.35
APP-213ENST00000464867 CYYR1Q96J86 154 aa6.6□□□□□ -1.35
APP-213ENST00000464867 MS4A6AQ9H2W1 248 aa6.6□□□□□ -1.35
APP-213ENST00000464867 PLEKHJ1Q9NW61 149 aa6.6□□□□□ -1.35
APP-213ENST00000464867 TRAV14DV4A0A0A6YYC5 116 aa6.59□□□□□ -1.35
APP-213ENST00000464867 TRAV2A0A0B4J234 112 aa6.59□□□□□ -1.35
APP-213ENST00000464867 SMIM9A6NGZ8 99 aa6.59□□□□□ -1.35
APP-213ENST00000464867 E9PI62 339 aa6.59□□□□□ -1.35
APP-213ENST00000464867 J3QRE1 110 aa6.59□□□□□ -1.35
APP-213ENST00000464867 CRHBPP24387 322 aa6.59□□□□□ -1.35
APP-213ENST00000464867 RELQ04864 619 aaPredicted RBP6.59□□□□□ -1.35
APP-213ENST00000464867 ARFRP1Q13795 201 aa6.59□□□□□ -1.35
APP-213ENST00000464867 OXA1LQ15070 435 aa6.59□□□□□ -1.35
APP-213ENST00000464867 ACTL10Q5JWF8 245 aa6.59□□□□□ -1.35
APP-213ENST00000464867 FAM90A2PQ658T7 463 aa6.59□□□□□ -1.35
APP-213ENST00000464867 CDH26Q8IXH8 852 aa6.59□□□□□ -1.35
APP-213ENST00000464867 ADGRG5Q8IZF4 528 aa6.59□□□□□ -1.35
APP-213ENST00000464867 UBAC2Q8NBM4 344 aa6.59□□□□□ -1.35
APP-213ENST00000464867 C16orf92Q96LL3 132 aa6.59□□□□□ -1.35
APP-213ENST00000464867 Q9H8V8 135 aa6.59□□□□□ -1.35
APP-213ENST00000464867 DKK2Q9UBU2 259 aa6.59□□□□□ -1.35
APP-213ENST00000464867 RABAC1Q9UI14 185 aa6.59□□□□□ -1.35
APP-213ENST00000464867 PUS1Q9Y606 427 aaKnown RBP eCLIP6.59□□□□□ -1.35
APP-213ENST00000464867 TRBV6-6A0A0A6YYG2 114 aa6.58□□□□□ -1.36
APP-213ENST00000464867 RPS10-NUDT3A0A1W2PQS6 291 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms