RNA–Protein interactions for RNA: ENST00000464605.1

UBA3-206, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

TSL 2

Gene UBA3, Length 431 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-206ENST00000464605 CEPT1Q9Y6K0 416 aa16.99■□□□□ 0.31
UBA3-206ENST00000464605 RPA2P15927 270 aa16.98■□□□□ 0.31
UBA3-206ENST00000464605 ECI1P42126 302 aa16.98■□□□□ 0.31
UBA3-206ENST00000464605 LPAR6P43657 344 aa16.98■□□□□ 0.31
UBA3-206ENST00000464605 OR2B8PP59922 312 aa16.98■□□□□ 0.31
UBA3-206ENST00000464605 KLF5Q13887 457 aaPredicted RBP16.98■□□□□ 0.31
UBA3-206ENST00000464605 LPCAT3Q6P1A2 487 aa16.98■□□□□ 0.31
UBA3-206ENST00000464605 ZNF429Q86V71 674 aa16.98■□□□□ 0.31
UBA3-206ENST00000464605 SLC25A42Q86VD7 318 aa16.98■□□□□ 0.31
UBA3-206ENST00000464605 C15orf40Q8WUR7 153 aa16.98■□□□□ 0.31
UBA3-206ENST00000464605 FANCD2OSQ96PS1 177 aa16.98■□□□□ 0.31
UBA3-206ENST00000464605 PEF1Q9UBV8 284 aaKnown RBP16.98■□□□□ 0.31
UBA3-206ENST00000464605 ZNF257Q9Y2Q1 563 aa16.98■□□□□ 0.31
UBA3-206ENST00000464605 FAM223BA6NKX1 122 aa16.97■□□□□ 0.31
UBA3-206ENST00000464605 CD74P04233 296 aa16.97■□□□□ 0.31
UBA3-206ENST00000464605 FGF2P09038 288 aa16.97■□□□□ 0.31
UBA3-206ENST00000464605 CTRB1P17538 263 aa16.97■□□□□ 0.31
UBA3-206ENST00000464605 CTRB2Q6GPI1 263 aa16.97■□□□□ 0.31
UBA3-206ENST00000464605 FAM223AQ8IWN6 122 aa16.97■□□□□ 0.31
UBA3-206ENST00000464605 CADM3Q8N126 398 aa16.97■□□□□ 0.31
UBA3-206ENST00000464605 DMBX1Q8NFW5 382 aa16.97■□□□□ 0.31
UBA3-206ENST00000464605 OR4D10Q8NGI6 311 aa16.97■□□□□ 0.31
UBA3-206ENST00000464605 PRR25Q96S07 402 aa16.97■□□□□ 0.31
UBA3-206ENST00000464605 MARCH11A6NNE9 402 aa16.96■□□□□ 0.31
UBA3-206ENST00000464605 GABARAPH6UMI1 98 aa16.96■□□□□ 0.31
UBA3-206ENST00000464605 ZP3P21754 424 aa16.96■□□□□ 0.31
UBA3-206ENST00000464605 PSMB6P28072 239 aa16.96■□□□□ 0.31
UBA3-206ENST00000464605 RNASE10Q5GAN6 216 aaKnown RBP16.96■□□□□ 0.31
UBA3-206ENST00000464605 DEFB121Q5J5C9 76 aa16.96■□□□□ 0.31
UBA3-206ENST00000464605 TBC1D26Q86UD7 250 aa16.96■□□□□ 0.31
UBA3-206ENST00000464605 SLC38A6Q8IZM9 456 aa16.96■□□□□ 0.31
UBA3-206ENST00000464605 TMEM229BQ8NBD8 167 aa16.96■□□□□ 0.31
UBA3-206ENST00000464605 NECAP1Q8NC96 275 aa16.96■□□□□ 0.31
UBA3-206ENST00000464605 FAM212BQ9NTI7 297 aaPredicted RBP16.96■□□□□ 0.31
UBA3-206ENST00000464605 LSM4Q9Y4Z0 139 aaKnown RBP16.96■□□□□ 0.31
UBA3-206ENST00000464605 DMRT1Q9Y5R6 373 aa16.96■□□□□ 0.31
UBA3-206ENST00000464605 IGLC7A0M8Q6 106 aa16.95■□□□□ 0.3
UBA3-206ENST00000464605 SAP30O75446 220 aa16.95■□□□□ 0.3
UBA3-206ENST00000464605 OR2J3O76001 311 aa16.95■□□□□ 0.3
UBA3-206ENST00000464605 TBPP20226 339 aa16.95■□□□□ 0.3
UBA3-206ENST00000464605 ATP5G2Q06055 141 aa16.95■□□□□ 0.3
UBA3-206ENST00000464605 ARRDC1Q8N5I2 433 aa16.95■□□□□ 0.3
UBA3-206ENST00000464605 NXF2Q9GZY0 626 aaKnown RBP16.95■□□□□ 0.3
UBA3-206ENST00000464605 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP16.94■□□□□ 0.3
UBA3-206ENST00000464605 KRASP01116 189 aa16.94■□□□□ 0.3
UBA3-206ENST00000464605 IGKV1-39P01597 117 aa16.94■□□□□ 0.3
UBA3-206ENST00000464605 IGKV1D-39P04432 117 aa16.94■□□□□ 0.3
UBA3-206ENST00000464605 G6PCP35575 357 aa16.94■□□□□ 0.3
UBA3-206ENST00000464605 EXOSC2Q13868 293 aaKnown RBP16.94■□□□□ 0.3
UBA3-206ENST00000464605 C15orf32Q32M92 178 aa16.94■□□□□ 0.3
UBA3-206ENST00000464605 IL34Q6ZMJ4 242 aa16.94■□□□□ 0.3
UBA3-206ENST00000464605 DIRAS2Q96HU8 199 aa16.94■□□□□ 0.3
UBA3-206ENST00000464605 SOSTQ9BQB4 213 aa16.94■□□□□ 0.3
UBA3-206ENST00000464605 ZNF256Q9Y2P7 627 aaPredicted RBP16.94■□□□□ 0.3
UBA3-206ENST00000464605 TEX50A0A1B0GTY4 177 aa16.93■□□□□ 0.3
UBA3-206ENST00000464605 BMPR1BO00238 502 aa16.93■□□□□ 0.3
UBA3-206ENST00000464605 CTDSPLO15194 276 aa16.93■□□□□ 0.3
UBA3-206ENST00000464605 NDUFB8O95169 186 aa16.93■□□□□ 0.3
UBA3-206ENST00000464605 IFNA6P05013 189 aa16.93■□□□□ 0.3
UBA3-206ENST00000464605 REG1AP05451 166 aa16.93■□□□□ 0.3
UBA3-206ENST00000464605 PTBP1P26599 531 aaKnown RBP eCLIP16.93■□□□□ 0.3
UBA3-206ENST00000464605 TAS2R19P59542 299 aa16.93■□□□□ 0.3
UBA3-206ENST00000464605 MRPS10P82664 201 aaKnown RBP16.93■□□□□ 0.3
UBA3-206ENST00000464605 SSBP1Q04837 148 aaKnown RBP16.93■□□□□ 0.3
UBA3-206ENST00000464605 SMIM4Q8WVI0 70 aa16.93■□□□□ 0.3
UBA3-206ENST00000464605 MRGPRFQ96AM1 343 aa16.93■□□□□ 0.3
UBA3-206ENST00000464605 IGLV11-55A0A075B6I3 123 aa16.92■□□□□ 0.3
UBA3-206ENST00000464605 DPPA5A6NC42 116 aa16.92■□□□□ 0.3
UBA3-206ENST00000464605 PI3P19957 117 aa16.92■□□□□ 0.3
UBA3-206ENST00000464605 SYNJ2BPP57105 145 aa16.92■□□□□ 0.3
UBA3-206ENST00000464605 ERVK-16P61578 105 aa16.92■□□□□ 0.3
UBA3-206ENST00000464605 RND3P61587 244 aa16.92■□□□□ 0.3
UBA3-206ENST00000464605 STEAP1BQ6NZ63 245 aa16.92■□□□□ 0.3
UBA3-206ENST00000464605 OR10W1Q8NGF6 305 aa16.92■□□□□ 0.3
UBA3-206ENST00000464605 SEC22AQ96IW7 307 aa16.92■□□□□ 0.3
UBA3-206ENST00000464605 SRSF8Q9BRL6 282 aaKnown RBP16.92■□□□□ 0.3
UBA3-206ENST00000464605 QTRT1Q9BXR0 403 aaKnown RBP16.92■□□□□ 0.3
UBA3-206ENST00000464605 COMMD5Q9GZQ3 224 aa16.92■□□□□ 0.3
UBA3-206ENST00000464605 C6orf62Q9GZU0 229 aaPredicted RBP16.92■□□□□ 0.3
UBA3-206ENST00000464605 RBM38Q9H0Z9 239 aaKnown RBP16.92■□□□□ 0.3
UBA3-206ENST00000464605 FBXL7Q9UJT9 491 aa16.92■□□□□ 0.3
UBA3-206ENST00000464605 NSG2Q9Y328 171 aa16.92■□□□□ 0.3
UBA3-206ENST00000464605 NOL3O60936 208 aaKnown RBP16.91■□□□□ 0.3
UBA3-206ENST00000464605 RAB3DO95716 219 aa16.91■□□□□ 0.3
UBA3-206ENST00000464605 IL18Q14116 193 aa16.91■□□□□ 0.3
UBA3-206ENST00000464605 OR9G4Q8NGQ1 327 aa16.91■□□□□ 0.3
UBA3-206ENST00000464605 TERB2Q8NHR7 220 aa16.91■□□□□ 0.3
UBA3-206ENST00000464605 ZNF486Q96H40 463 aaPredicted RBP16.91■□□□□ 0.3
UBA3-206ENST00000464605 HUWE1Q7Z6Z7 4374 aaKnown RBP16.91■□□□□ 0.3
UBA3-206ENST00000464605 DBX1A6NMT0 343 aa16.9■□□□□ 0.3
UBA3-206ENST00000464605 SPNP16150 400 aa16.9■□□□□ 0.3
UBA3-206ENST00000464605 S100GP29377 79 aa16.9■□□□□ 0.3
UBA3-206ENST00000464605 TNFSF8P32971 234 aa16.9■□□□□ 0.3
UBA3-206ENST00000464605 WT1-ASQ06250 92 aa16.9■□□□□ 0.3
UBA3-206ENST00000464605 FAAP20Q6NZ36 180 aa16.9■□□□□ 0.3
UBA3-206ENST00000464605 HAPLN4Q86UW8 402 aa16.9■□□□□ 0.3
UBA3-206ENST00000464605 CCDC140Q96MF4 163 aa16.9■□□□□ 0.3
UBA3-206ENST00000464605 OR4C12Q96R67 309 aa16.9■□□□□ 0.3
UBA3-206ENST00000464605 NDUFA4L2Q9NRX3 87 aa16.9■□□□□ 0.3
UBA3-206ENST00000464605 RABL2AQ9UBK7 228 aaPredicted RBP16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms