RNA–Protein interactions for RNA: ENST00000464577.1

USP48-206, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2

Gene USP48, Length 2,089 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-206ENST00000464577 PRR20EP86478 221 aa6.03□□□□□ -1.44
USP48-206ENST00000464577 PRR20CP86479 221 aa6.03□□□□□ -1.44
USP48-206ENST00000464577 PRR20DP86480 221 aa6.03□□□□□ -1.44
USP48-206ENST00000464577 PRR20BP86481 221 aa6.03□□□□□ -1.44
USP48-206ENST00000464577 PRR20AP86496 221 aa6.03□□□□□ -1.44
USP48-206ENST00000464577 RELBQ01201 579 aa6.03□□□□□ -1.44
USP48-206ENST00000464577 C21orf62-AS1Q17RA5 79 aa6.03□□□□□ -1.44
USP48-206ENST00000464577 SPATA31B1PQ5VZV4 182 aa6.03□□□□□ -1.44
USP48-206ENST00000464577 TEPPQ6URK8 271 aa6.03□□□□□ -1.44
USP48-206ENST00000464577 Q6ZN92 141 aa6.03□□□□□ -1.44
USP48-206ENST00000464577 ACP7Q6ZNF0 438 aa6.03□□□□□ -1.44
USP48-206ENST00000464577 NIT1Q86X76 327 aa6.03□□□□□ -1.44
USP48-206ENST00000464577 ARL6IP6Q8N6S5 226 aa6.03□□□□□ -1.44
USP48-206ENST00000464577 OR5B3Q8NH48 314 aa6.03□□□□□ -1.44
USP48-206ENST00000464577 Q8TCH9 128 aa6.03□□□□□ -1.44
USP48-206ENST00000464577 CORO2AQ92828 525 aa6.03□□□□□ -1.44
USP48-206ENST00000464577 FOXJ2Q9P0K8 574 aa6.03□□□□□ -1.44
USP48-206ENST00000464577 IL19Q9UHD0 177 aa6.03□□□□□ -1.44
USP48-206ENST00000464577 LOXL2Q9Y4K0 774 aa6.03□□□□□ -1.44
USP48-206ENST00000464577 GTF3C1Q12789 2109 aa6.03□□□□□ -1.44
USP48-206ENST00000464577 CABIN1Q9Y6J0 2220 aa6.03□□□□□ -1.44
USP48-206ENST00000464577 SMIM27A0A1W2PRY6 76 aa6.03□□□□□ -1.44
USP48-206ENST00000464577 HELTA6NFD8 242 aa6.03□□□□□ -1.44
USP48-206ENST00000464577 DPRXA6NFQ7 191 aa6.03□□□□□ -1.44
USP48-206ENST00000464577 FCGR3BO75015 233 aa6.03□□□□□ -1.44
USP48-206ENST00000464577 PMCHP20382 165 aa6.03□□□□□ -1.44
USP48-206ENST00000464577 SSTR5P35346 364 aa6.03□□□□□ -1.44
USP48-206ENST00000464577 PMCHL1Q16048 86 aa6.03□□□□□ -1.44
USP48-206ENST00000464577 RTL8BQ17RB0 113 aa6.03□□□□□ -1.44
USP48-206ENST00000464577 TIGITQ495A1 244 aa6.03□□□□□ -1.44
USP48-206ENST00000464577 MORN2Q502X0 79 aa6.03□□□□□ -1.44
USP48-206ENST00000464577 SPINK14Q6IE38 97 aa6.03□□□□□ -1.44
USP48-206ENST00000464577 RASL11AQ6T310 242 aa6.03□□□□□ -1.44
USP48-206ENST00000464577 TMPRSS7Q7RTY8 843 aa6.03□□□□□ -1.44
USP48-206ENST00000464577 C11orf53Q8IXP5 236 aa6.03□□□□□ -1.44
USP48-206ENST00000464577 OR13A1Q8NGR1 328 aa6.03□□□□□ -1.44
USP48-206ENST00000464577 WIPF2Q8TF74 440 aaPredicted RBP6.03□□□□□ -1.44
USP48-206ENST00000464577 SSMEM1Q8WWF3 244 aa6.03□□□□□ -1.44
USP48-206ENST00000464577 RCHY1Q96PM5 261 aa6.03□□□□□ -1.44
USP48-206ENST00000464577 TTTY12Q9BZ98 90 aa6.03□□□□□ -1.44
USP48-206ENST00000464577 SEPSECSQ9HD40 501 aaKnown RBP6.03□□□□□ -1.44
USP48-206ENST00000464577 CDC42EP3Q9UKI2 254 aa6.03□□□□□ -1.44
USP48-206ENST00000464577 TCF19Q9Y242 345 aa6.03□□□□□ -1.44
USP48-206ENST00000464577 PCSK5Q92824 1860 aa6.03□□□□□ -1.44
USP48-206ENST00000464577 NKX6-3A6NJ46 265 aa6.02□□□□□ -1.45
USP48-206ENST00000464577 K7EP13 123 aa6.02□□□□□ -1.45
USP48-206ENST00000464577 LCE2BO14633 110 aa6.02□□□□□ -1.45
USP48-206ENST00000464577 ITGB1BP1O14713 200 aa6.02□□□□□ -1.45
USP48-206ENST00000464577 FOXH1O75593 365 aa6.02□□□□□ -1.45
USP48-206ENST00000464577 CA2P00918 260 aa6.02□□□□□ -1.45
USP48-206ENST00000464577 CGAP01215 116 aa6.02□□□□□ -1.45
USP48-206ENST00000464577 SRIP30626 198 aa6.02□□□□□ -1.45
USP48-206ENST00000464577 MAGEA5P43359 124 aa6.02□□□□□ -1.45
USP48-206ENST00000464577 LINC00205P59089 165 aa6.02□□□□□ -1.45
USP48-206ENST00000464577 ZXDAP98168 799 aa6.02□□□□□ -1.45
USP48-206ENST00000464577 ALKBH6Q3KRA9 238 aa6.02□□□□□ -1.45
USP48-206ENST00000464577 LEMD1Q68G75 181 aa6.02□□□□□ -1.45
USP48-206ENST00000464577 Q6ZR03 302 aa6.02□□□□□ -1.45
USP48-206ENST00000464577 ABHD12Q8N2K0 398 aa6.02□□□□□ -1.45
USP48-206ENST00000464577 PNKDQ8N490 385 aa6.02□□□□□ -1.45
USP48-206ENST00000464577 TMEM251Q8N6I4 163 aa6.02□□□□□ -1.45
USP48-206ENST00000464577 OR2D3Q8NGH3 330 aa6.02□□□□□ -1.45
USP48-206ENST00000464577 OR4P4Q8NGL7 312 aa6.02□□□□□ -1.45
USP48-206ENST00000464577 SLC25A40Q8TBP6 338 aa6.02□□□□□ -1.45
USP48-206ENST00000464577 TSKUQ8WUA8 353 aa6.02□□□□□ -1.45
USP48-206ENST00000464577 CT55Q8WUE5 264 aa6.02□□□□□ -1.45
USP48-206ENST00000464577 COMMD5Q9GZQ3 224 aa6.02□□□□□ -1.45
USP48-206ENST00000464577 CXXC4Q9H2H0 198 aa6.02□□□□□ -1.45
USP48-206ENST00000464577 FSCN3Q9NQT6 498 aa6.02□□□□□ -1.45
USP48-206ENST00000464577 SLC35D1Q9NTN3 355 aa6.02□□□□□ -1.45
USP48-206ENST00000464577 TMEM140Q9NV12 185 aa6.02□□□□□ -1.45
USP48-206ENST00000464577 JPT1Q9UK76 154 aa6.02□□□□□ -1.45
USP48-206ENST00000464577 PILRBQ9UKJ0 227 aa6.02□□□□□ -1.45
USP48-206ENST00000464577 ESPL1Q14674 2120 aa6.02□□□□□ -1.45
USP48-206ENST00000464577 SDK2Q58EX2 2172 aa6.02□□□□□ -1.45
USP48-206ENST00000464577 PTPRBP23467 1997 aa6.02□□□□□ -1.45
USP48-206ENST00000464577 IGHV2-26A0A0B4J1V2 119 aa6.02□□□□□ -1.45
USP48-206ENST00000464577 IGHV3-43A0A0B4J1X8 118 aa6.02□□□□□ -1.45
USP48-206ENST00000464577 IZUMO1RA6ND01 250 aa6.02□□□□□ -1.45
USP48-206ENST00000464577 C15orf61A6NNL5 157 aa6.02□□□□□ -1.45
USP48-206ENST00000464577 WNT9BO14905 357 aa6.02□□□□□ -1.45
USP48-206ENST00000464577 PROP1O75360 226 aa6.02□□□□□ -1.45
USP48-206ENST00000464577 APCSP02743 223 aa6.02□□□□□ -1.45
USP48-206ENST00000464577 LINC00869P0C866 280 aa6.02□□□□□ -1.45
USP48-206ENST00000464577 IGHV3-43DP0DP04 118 aa6.02□□□□□ -1.45
USP48-206ENST00000464577 NPY1RP25929 384 aa6.02□□□□□ -1.45
USP48-206ENST00000464577 TSPOP30536 169 aa6.02□□□□□ -1.45
USP48-206ENST00000464577 SELENOVP59797 346 aa6.02□□□□□ -1.45
USP48-206ENST00000464577 UBE2V1Q13404 147 aa6.02□□□□□ -1.45
USP48-206ENST00000464577 SMIM21Q3B7S5 101 aa6.02□□□□□ -1.45
USP48-206ENST00000464577 STUMQ69YW2 141 aa6.02□□□□□ -1.45
USP48-206ENST00000464577 C6orf15Q6UXA7 325 aaPredicted RBP6.02□□□□□ -1.45
USP48-206ENST00000464577 PQLC2Q6ZP29 291 aa6.02□□□□□ -1.45
USP48-206ENST00000464577 MIR17HGQ75NE6 70 aa6.02□□□□□ -1.45
USP48-206ENST00000464577 FAM90A1Q86YD7 464 aa6.02□□□□□ -1.45
USP48-206ENST00000464577 ZNF439Q8NDP4 499 aa6.02□□□□□ -1.45
USP48-206ENST00000464577 SLC24A4Q8NFF2 622 aa6.02□□□□□ -1.45
USP48-206ENST00000464577 NEUROG1Q92886 237 aa6.02□□□□□ -1.45
USP48-206ENST00000464577 BORCS7Q96B45 105 aa6.02□□□□□ -1.45
USP48-206ENST00000464577 IGF2BP2-AS1Q96M15 143 aa6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms