RNA–Protein interactions for RNA: ENST00000463477.5

PTPRD-207, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 1,697 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-207ENST00000463477 RFESDQ8TAC1 157 aa8.11□□□□□ -1.11
PTPRD-207ENST00000463477 DDB2Q92466 427 aa8.11□□□□□ -1.11
PTPRD-207ENST00000463477 CORO2AQ92828 525 aa8.11□□□□□ -1.11
PTPRD-207ENST00000463477 RAB39BQ96DA2 213 aa8.11□□□□□ -1.11
PTPRD-207ENST00000463477 DIRC2Q96SL1 478 aa8.11□□□□□ -1.11
PTPRD-207ENST00000463477 SMR3AQ99954 134 aa8.11□□□□□ -1.11
PTPRD-207ENST00000463477 DCTN5Q9BTE1 182 aa8.11□□□□□ -1.11
PTPRD-207ENST00000463477 GGACTQ9BVM4 153 aa8.11□□□□□ -1.11
PTPRD-207ENST00000463477 MAP1LC3BQ9GZQ8 125 aa8.11□□□□□ -1.11
PTPRD-207ENST00000463477 IFI27L2Q9H2X8 130 aa8.11□□□□□ -1.11
PTPRD-207ENST00000463477 TMEM242Q9NWH2 141 aa8.11□□□□□ -1.11
PTPRD-207ENST00000463477 CALYQ9NYX4 217 aa8.11□□□□□ -1.11
PTPRD-207ENST00000463477 GNG12Q9UBI6 72 aa8.11□□□□□ -1.11
PTPRD-207ENST00000463477 VAX2Q9UIW0 290 aa8.11□□□□□ -1.11
PTPRD-207ENST00000463477 PUS1Q9Y606 427 aaKnown RBP eCLIP8.11□□□□□ -1.11
PTPRD-207ENST00000463477 HIVEP2P31629 2446 aa8.11□□□□□ -1.11
PTPRD-207ENST00000463477 A0A1W2PPH5 198 aa8.11□□□□□ -1.11
PTPRD-207ENST00000463477 MPDU1O75352 247 aa8.11□□□□□ -1.11
PTPRD-207ENST00000463477 OR2C1O95371 312 aa8.11□□□□□ -1.11
PTPRD-207ENST00000463477 LY6G6DO95868 133 aa8.11□□□□□ -1.11
PTPRD-207ENST00000463477 CD55P08174 381 aa8.11□□□□□ -1.11
PTPRD-207ENST00000463477 NQO2P16083 231 aa8.11□□□□□ -1.11
PTPRD-207ENST00000463477 AKR1C3P42330 323 aa8.11□□□□□ -1.11
PTPRD-207ENST00000463477 C17orf58Q2M2W7 97 aa8.11□□□□□ -1.11
PTPRD-207ENST00000463477 TMEM249Q2WGJ8 235 aa8.11□□□□□ -1.11
PTPRD-207ENST00000463477 OR2B11Q5JQS5 317 aa8.11□□□□□ -1.11
PTPRD-207ENST00000463477 TEX36Q5VZQ5 186 aa8.11□□□□□ -1.11
PTPRD-207ENST00000463477 OR8G2PQ6IF36 304 aa8.11□□□□□ -1.11
PTPRD-207ENST00000463477 RBMS3Q6XE24 437 aaKnown RBP8.11□□□□□ -1.11
PTPRD-207ENST00000463477 ADTRPQ96IZ2 230 aa8.11□□□□□ -1.11
PTPRD-207ENST00000463477 PIMREGQ9BSJ6 248 aa8.11□□□□□ -1.11
PTPRD-207ENST00000463477 C20orf24Q9BUV8 137 aa8.11□□□□□ -1.11
PTPRD-207ENST00000463477 VSIRQ9H7M9 311 aa8.11□□□□□ -1.11
PTPRD-207ENST00000463477 ZNF665Q9H7R5 613 aa8.11□□□□□ -1.11
PTPRD-207ENST00000463477 GCM1Q9NP62 436 aa8.11□□□□□ -1.11
PTPRD-207ENST00000463477 GFOD1Q9NXC2 390 aa8.11□□□□□ -1.11
PTPRD-207ENST00000463477 CLN8Q9UBY8 286 aa8.11□□□□□ -1.11
PTPRD-207ENST00000463477 KBTBD11-OT1A0A1B0GTJ5 212 aa8.1□□□□□ -1.11
PTPRD-207ENST00000463477 A0A1W2PPE2 198 aa8.1□□□□□ -1.11
PTPRD-207ENST00000463477 C5orf52A6NGY3 159 aa8.1□□□□□ -1.11
PTPRD-207ENST00000463477 ZNF729A6NN14 1252 aaPredicted RBP8.1□□□□□ -1.11
PTPRD-207ENST00000463477 C15orf62A8K5M9 175 aa8.1□□□□□ -1.11
PTPRD-207ENST00000463477 CEBPZOSA8MTT3 80 aa8.1□□□□□ -1.11
PTPRD-207ENST00000463477 C17orf112F2Z3M2 114 aa8.1□□□□□ -1.11
PTPRD-207ENST00000463477 IGHV1-46P01743 117 aa8.1□□□□□ -1.11
PTPRD-207ENST00000463477 COL8A2P25067 703 aa8.1□□□□□ -1.11
PTPRD-207ENST00000463477 ERVK-16P61578 105 aa8.1□□□□□ -1.11
PTPRD-207ENST00000463477 TNFAIP6P98066 277 aaPredicted RBP8.1□□□□□ -1.11
PTPRD-207ENST00000463477 POU2AF1Q16633 256 aa8.1□□□□□ -1.11
PTPRD-207ENST00000463477 AKIRIN2Q53H80 203 aa8.1□□□□□ -1.11
PTPRD-207ENST00000463477 HEPN1Q6WQI6 88 aa8.1□□□□□ -1.11
PTPRD-207ENST00000463477 ZNF788Q6ZQV5 615 aa8.1□□□□□ -1.11
PTPRD-207ENST00000463477 SSX7Q7RTT5 188 aa8.1□□□□□ -1.11
PTPRD-207ENST00000463477 RPP25LQ8N5L8 163 aaKnown RBP8.1□□□□□ -1.11
PTPRD-207ENST00000463477 OR4S2Q8NH73 311 aa8.1□□□□□ -1.11
PTPRD-207ENST00000463477 CHODLQ9H9P2 273 aa8.1□□□□□ -1.11
PTPRD-207ENST00000463477 SLC39A9Q9NUM3 307 aa8.1□□□□□ -1.11
PTPRD-207ENST00000463477 GNG13Q9P2W3 67 aa8.1□□□□□ -1.11
PTPRD-207ENST00000463477 IGHV3OR15-7A0A075B7D8 119 aa8.09□□□□□ -1.11
PTPRD-207ENST00000463477 TRGV10A0A0A0MS01 117 aa8.09□□□□□ -1.11
PTPRD-207ENST00000463477 TMEM250H0YL14 139 aa8.09□□□□□ -1.11
PTPRD-207ENST00000463477 M0R1X1 148 aa8.09□□□□□ -1.11
PTPRD-207ENST00000463477 UBE2CO00762 179 aa8.09□□□□□ -1.11
PTPRD-207ENST00000463477 SPRY3O43610 288 aa8.09□□□□□ -1.11
PTPRD-207ENST00000463477 FCGR3BO75015 233 aa8.09□□□□□ -1.11
PTPRD-207ENST00000463477 OR9G9P0C7N8 305 aa8.09□□□□□ -1.11
PTPRD-207ENST00000463477 FGF7P21781 194 aa8.09□□□□□ -1.11
PTPRD-207ENST00000463477 USF1P22415 310 aaPredicted RBP8.09□□□□□ -1.11
PTPRD-207ENST00000463477 THBS3P49746 956 aa8.09□□□□□ -1.11
PTPRD-207ENST00000463477 CCL8P80075 99 aa8.09□□□□□ -1.11
PTPRD-207ENST00000463477 DLK1P80370 383 aa8.09□□□□□ -1.11
PTPRD-207ENST00000463477 SPRNQ5BIV9 151 aa8.09□□□□□ -1.11
PTPRD-207ENST00000463477 ACSM6Q6P461 480 aa8.09□□□□□ -1.11
PTPRD-207ENST00000463477 LCN15Q6UWW0 184 aa8.09□□□□□ -1.11
PTPRD-207ENST00000463477 FAM24BQ8N5W8 94 aa8.09□□□□□ -1.11
PTPRD-207ENST00000463477 ZNRF1Q8ND25 227 aa8.09□□□□□ -1.11
PTPRD-207ENST00000463477 MAPK1IP1LQ8NDC0 245 aa8.09□□□□□ -1.11
PTPRD-207ENST00000463477 ZNF439Q8NDP4 499 aa8.09□□□□□ -1.11
PTPRD-207ENST00000463477 OR10A7Q8NGE5 316 aa8.09□□□□□ -1.11
PTPRD-207ENST00000463477 LHX4Q969G2 390 aa8.09□□□□□ -1.11
PTPRD-207ENST00000463477 ZDHHC16Q969W1 377 aa8.09□□□□□ -1.11
PTPRD-207ENST00000463477 ISOC2Q96AB3 205 aa8.09□□□□□ -1.11
PTPRD-207ENST00000463477 GAFA1Q96PS6 74 aa8.09□□□□□ -1.11
PTPRD-207ENST00000463477 S1PR3Q99500 378 aa8.09□□□□□ -1.11
PTPRD-207ENST00000463477 NPCDR1Q9BY65 106 aa8.09□□□□□ -1.11
PTPRD-207ENST00000463477 BPESC1Q9GZL8 116 aa8.09□□□□□ -1.11
PTPRD-207ENST00000463477 MANBALQ9NQG1 85 aa8.09□□□□□ -1.11
PTPRD-207ENST00000463477 WDR83OSQ9Y284 106 aa8.09□□□□□ -1.11
PTPRD-207ENST00000463477 NSD1Q96L73 2696 aaPredicted RBP8.09□□□□□ -1.11
PTPRD-207ENST00000463477 SEC14L6B5MCN3 397 aa8.08□□□□□ -1.12
PTPRD-207ENST00000463477 LYNX1G3V0Z9 82 aa8.08□□□□□ -1.12
PTPRD-207ENST00000463477 IFNA17P01571 189 aa8.08□□□□□ -1.12
PTPRD-207ENST00000463477 IGKV1D-33P01593 117 aa8.08□□□□□ -1.12
PTPRD-207ENST00000463477 IGKV1-33P01594 117 aa8.08□□□□□ -1.12
PTPRD-207ENST00000463477 LYNX1P0DP58 116 aa8.08□□□□□ -1.12
PTPRD-207ENST00000463477 VDAC2P45880 294 aaPredicted RBP8.08□□□□□ -1.12
PTPRD-207ENST00000463477 ZNF134P52741 427 aa8.08□□□□□ -1.12
PTPRD-207ENST00000463477 RELBQ01201 579 aa8.08□□□□□ -1.12
PTPRD-207ENST00000463477 KRTAP1-1Q07627 177 aa8.08□□□□□ -1.12
PTPRD-207ENST00000463477 PRAMEF5Q5TYX0 476 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms