RNA–Protein interactions for RNA: ENST00000463440.1

COL1A1-202, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 614 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-202ENST00000463440 TATDN3Q17R31 274 aa12.46□□□□□ -0.41
COL1A1-202ENST00000463440 RNASE10Q5GAN6 216 aaKnown RBP12.46□□□□□ -0.41
COL1A1-202ENST00000463440 FAM209BQ5JX69 171 aa12.46□□□□□ -0.41
COL1A1-202ENST00000463440 OR6Q1Q8NGQ2 317 aa12.46□□□□□ -0.41
COL1A1-202ENST00000463440 OR52I2Q8NH67 350 aa12.46□□□□□ -0.41
COL1A1-202ENST00000463440 FCAMRQ8WWV6 532 aa12.46□□□□□ -0.41
COL1A1-202ENST00000463440 RSRP1Q9BUV0 290 aa12.46□□□□□ -0.41
COL1A1-202ENST00000463440 COMMD5Q9GZQ3 224 aa12.46□□□□□ -0.41
COL1A1-202ENST00000463440 MTFP1Q9UDX5 166 aa12.46□□□□□ -0.41
COL1A1-202ENST00000463440 A0A1B0GW64 132 aa12.45□□□□□ -0.42
COL1A1-202ENST00000463440 MARCH11A6NNE9 402 aa12.45□□□□□ -0.42
COL1A1-202ENST00000463440 M0QYG6 137 aa12.45□□□□□ -0.42
COL1A1-202ENST00000463440 OR2J3O76001 311 aa12.45□□□□□ -0.42
COL1A1-202ENST00000463440 CRYGCP07315 174 aa12.45□□□□□ -0.42
COL1A1-202ENST00000463440 MYOD1P15172 320 aa12.45□□□□□ -0.42
COL1A1-202ENST00000463440 AREGP15514 252 aa12.45□□□□□ -0.42
COL1A1-202ENST00000463440 TBPP20226 339 aa12.45□□□□□ -0.42
COL1A1-202ENST00000463440 PSMB6P28072 239 aa12.45□□□□□ -0.42
COL1A1-202ENST00000463440 OR2B8PP59922 312 aa12.45□□□□□ -0.42
COL1A1-202ENST00000463440 CD69Q07108 199 aa12.45□□□□□ -0.42
COL1A1-202ENST00000463440 RPEL1Q2QD12 228 aa12.45□□□□□ -0.42
COL1A1-202ENST00000463440 C15orf32Q32M92 178 aa12.45□□□□□ -0.42
COL1A1-202ENST00000463440 PHLDA2Q53GA4 152 aa12.45□□□□□ -0.42
COL1A1-202ENST00000463440 SLC38A6Q8IZM9 456 aa12.45□□□□□ -0.42
COL1A1-202ENST00000463440 ABHD1Q96SE0 405 aa12.45□□□□□ -0.42
COL1A1-202ENST00000463440 MIXL1Q9H2W2 232 aa12.45□□□□□ -0.42
COL1A1-202ENST00000463440 CCDC59Q9P031 241 aaKnown RBP12.45□□□□□ -0.42
COL1A1-202ENST00000463440 SORL1Q92673 2214 aa12.44□□□□□ -0.42
COL1A1-202ENST00000463440 TRAV3A0A0B4J244 114 aa12.44□□□□□ -0.42
COL1A1-202ENST00000463440 CTDSP2O14595 271 aa12.44□□□□□ -0.42
COL1A1-202ENST00000463440 TRBV12-3P01733 135 aa12.44□□□□□ -0.42
COL1A1-202ENST00000463440 DEFA4P12838 97 aa12.44□□□□□ -0.42
COL1A1-202ENST00000463440 RPA2P15927 270 aa12.44□□□□□ -0.42
COL1A1-202ENST00000463440 HIST1H1BP16401 226 aaKnown RBP12.44□□□□□ -0.42
COL1A1-202ENST00000463440 SYNJ2BPP57105 145 aa12.44□□□□□ -0.42
COL1A1-202ENST00000463440 MRPS10P82664 201 aaKnown RBP12.44□□□□□ -0.42
COL1A1-202ENST00000463440 LAX1Q8IWV1 398 aa12.44□□□□□ -0.42
COL1A1-202ENST00000463440 DYNC2LI1Q8TCX1 351 aa12.44□□□□□ -0.42
COL1A1-202ENST00000463440 B9D2Q9BPU9 175 aa12.44□□□□□ -0.42
COL1A1-202ENST00000463440 SRSF8Q9BRL6 282 aaKnown RBP12.44□□□□□ -0.42
COL1A1-202ENST00000463440 FAM212BQ9NTI7 297 aaPredicted RBP12.44□□□□□ -0.42
COL1A1-202ENST00000463440 FBXL7Q9UJT9 491 aa12.44□□□□□ -0.42
COL1A1-202ENST00000463440 LSM4Q9Y4Z0 139 aaKnown RBP12.44□□□□□ -0.42
COL1A1-202ENST00000463440 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.43□□□□□ -0.42
COL1A1-202ENST00000463440 CGB1A6NKQ9 187 aa12.43□□□□□ -0.42
COL1A1-202ENST00000463440 GABARAPH6UMI1 98 aa12.43□□□□□ -0.42
COL1A1-202ENST00000463440 SNAPC5O75971 98 aa12.43□□□□□ -0.42
COL1A1-202ENST00000463440 KRASP01116 189 aa12.43□□□□□ -0.42
COL1A1-202ENST00000463440 CD3DP04234 171 aa12.43□□□□□ -0.42
COL1A1-202ENST00000463440 SPNP16150 400 aa12.43□□□□□ -0.42
COL1A1-202ENST00000463440 CTRB1P17538 263 aa12.43□□□□□ -0.42
COL1A1-202ENST00000463440 ZNF585BQ52M93 769 aa12.43□□□□□ -0.42
COL1A1-202ENST00000463440 CTRB2Q6GPI1 263 aa12.43□□□□□ -0.42
COL1A1-202ENST00000463440 THOC7Q6I9Y2 204 aaKnown RBP12.43□□□□□ -0.42
COL1A1-202ENST00000463440 TBC1D26Q86UD7 250 aa12.43□□□□□ -0.42
COL1A1-202ENST00000463440 CADM3Q8N126 398 aa12.43□□□□□ -0.42
COL1A1-202ENST00000463440 ARRDC1Q8N5I2 433 aa12.43□□□□□ -0.42
COL1A1-202ENST00000463440 OR9G4Q8NGQ1 327 aa12.43□□□□□ -0.42
COL1A1-202ENST00000463440 QTRT1Q9BXR0 403 aaKnown RBP12.43□□□□□ -0.42
COL1A1-202ENST00000463440 RABL2AQ9UBK7 228 aaPredicted RBP12.43□□□□□ -0.42
COL1A1-202ENST00000463440 RABL2BQ9UNT1 228 aa12.43□□□□□ -0.42
COL1A1-202ENST00000463440 REG1AP05451 166 aa12.42□□□□□ -0.42
COL1A1-202ENST00000463440 TRAPPC2P0DI81 140 aa12.42□□□□□ -0.42
COL1A1-202ENST00000463440 TRAPPC2BP0DI82 140 aa12.42□□□□□ -0.42
COL1A1-202ENST00000463440 PGAM2P15259 253 aa12.42□□□□□ -0.42
COL1A1-202ENST00000463440 G6PCP35575 357 aa12.42□□□□□ -0.42
COL1A1-202ENST00000463440 TAS2R19P59542 299 aa12.42□□□□□ -0.42
COL1A1-202ENST00000463440 SSBP1Q04837 148 aaKnown RBP12.42□□□□□ -0.42
COL1A1-202ENST00000463440 KLK9Q2XQG4 91 aa12.42□□□□□ -0.42
COL1A1-202ENST00000463440 C19orf35Q6ZS72 473 aa12.42□□□□□ -0.42
COL1A1-202ENST00000463440 HSD17B13Q7Z5P4 300 aaPredicted RBP12.42□□□□□ -0.42
COL1A1-202ENST00000463440 TMEM229BQ8NBD8 167 aa12.42□□□□□ -0.42
COL1A1-202ENST00000463440 ZNF486Q96H40 463 aaPredicted RBP12.42□□□□□ -0.42
COL1A1-202ENST00000463440 DIRAS2Q96HU8 199 aa12.42□□□□□ -0.42
COL1A1-202ENST00000463440 FANCD2OSQ96PS1 177 aa12.42□□□□□ -0.42
COL1A1-202ENST00000463440 KLK9Q9UKQ9 250 aa12.42□□□□□ -0.42
COL1A1-202ENST00000463440 IGLC7A0M8Q6 106 aa12.41□□□□□ -0.42
COL1A1-202ENST00000463440 BMPR1BO00238 502 aa12.41□□□□□ -0.42
COL1A1-202ENST00000463440 NDUFB8O95169 186 aa12.41□□□□□ -0.42
COL1A1-202ENST00000463440 OR1L8Q8NGR8 309 aa12.41□□□□□ -0.42
COL1A1-202ENST00000463440 ISOC1Q96CN7 298 aa12.41□□□□□ -0.42
COL1A1-202ENST00000463440 TSC22D3Q99576 134 aa12.41□□□□□ -0.42
COL1A1-202ENST00000463440 PEMTQ9UBM1 199 aa12.41□□□□□ -0.42
COL1A1-202ENST00000463440 TEX50A0A1B0GTY4 177 aa12.4□□□□□ -0.42
COL1A1-202ENST00000463440 H3BMQ9 156 aa12.4□□□□□ -0.42
COL1A1-202ENST00000463440 CYB5BO43169 146 aa12.4□□□□□ -0.42
COL1A1-202ENST00000463440 RAB3DO95716 219 aa12.4□□□□□ -0.42
COL1A1-202ENST00000463440 IGLV1-51P01701 117 aa12.4□□□□□ -0.42
COL1A1-202ENST00000463440 CD74P04233 296 aa12.4□□□□□ -0.42
COL1A1-202ENST00000463440 GP9P14770 177 aa12.4□□□□□ -0.42
COL1A1-202ENST00000463440 PTBP1P26599 531 aaKnown RBP eCLIP12.4□□□□□ -0.42
COL1A1-202ENST00000463440 RND3P61587 244 aa12.4□□□□□ -0.42
COL1A1-202ENST00000463440 IL18Q14116 193 aa12.4□□□□□ -0.42
COL1A1-202ENST00000463440 STEAP1BQ6NZ63 245 aa12.4□□□□□ -0.42
COL1A1-202ENST00000463440 LHFPL1Q86WI0 220 aa12.4□□□□□ -0.42
COL1A1-202ENST00000463440 SMIM4Q8WVI0 70 aa12.4□□□□□ -0.42
COL1A1-202ENST00000463440 EEF1AKMT3Q96AZ1 226 aa12.4□□□□□ -0.42
COL1A1-202ENST00000463440 C6orf62Q9GZU0 229 aaPredicted RBP12.4□□□□□ -0.42
COL1A1-202ENST00000463440 FKBP11Q9NYL4 201 aa12.4□□□□□ -0.42
COL1A1-202ENST00000463440 THYN1Q9P016 225 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 108.1 ms