RNA–Protein interactions for RNA: ENST00000463407.5

NUP58-206, Transcript of nucleoporin 58, humanhuman

TSL 1 (best) BASIC

Gene NUP58, Length 6,360 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP58-206ENST00000463407 IGHV1-46P01743 117 aa10.78□□□□□ -0.68
NUP58-206ENST00000463407 WDR25Q64LD2 544 aaPredicted RBP10.78□□□□□ -0.68
NUP58-206ENST00000463407 LINC00305Q7Z4B0 112 aa10.78□□□□□ -0.68
NUP58-206ENST00000463407 MRPL13Q9BYD1 178 aaKnown RBP10.78□□□□□ -0.68
NUP58-206ENST00000463407 LYPD3O95274 346 aa10.77□□□□□ -0.68
NUP58-206ENST00000463407 RELBQ01201 579 aa10.77□□□□□ -0.68
NUP58-206ENST00000463407 CYB5R2Q6BCY4 276 aa10.77□□□□□ -0.68
NUP58-206ENST00000463407 MGAMO43451 1857 aa10.77□□□□□ -0.68
NUP58-206ENST00000463407 F12P00748 615 aaPredicted RBP10.77□□□□□ -0.69
NUP58-206ENST00000463407 BTF3P20290 206 aaKnown RBP10.77□□□□□ -0.69
NUP58-206ENST00000463407 EFNA4P52798 201 aa10.77□□□□□ -0.69
NUP58-206ENST00000463407 H2BFSP57053 126 aa10.77□□□□□ -0.69
NUP58-206ENST00000463407 C20orf204Q6ZNR8 217 aa10.77□□□□□ -0.69
NUP58-206ENST00000463407 PRO1933Q9H354 126 aa10.77□□□□□ -0.69
NUP58-206ENST00000463407 ZNF250P15622 560 aa10.77□□□□□ -0.69
NUP58-206ENST00000463407 CYP2G1PQ6ZSU1 146 aa10.77□□□□□ -0.69
NUP58-206ENST00000463407 GALNT14Q96FL9 552 aa10.77□□□□□ -0.69
NUP58-206ENST00000463407 CD24P25063 80 aa10.77□□□□□ -0.69
NUP58-206ENST00000463407 RPL29P47914 159 aaKnown RBP10.77□□□□□ -0.69
NUP58-206ENST00000463407 PSMB2P49721 201 aa10.77□□□□□ -0.69
NUP58-206ENST00000463407 ZNF672Q499Z4 452 aaPredicted RBP10.77□□□□□ -0.69
NUP58-206ENST00000463407 FAM159AQ6UWV7 190 aa10.77□□□□□ -0.69
NUP58-206ENST00000463407 GGNQ86UU5 652 aa10.77□□□□□ -0.69
NUP58-206ENST00000463407 C11orf44Q8N8P7 122 aa10.77□□□□□ -0.69
NUP58-206ENST00000463407 SHISA3A0PJX4 238 aa10.77□□□□□ -0.69
NUP58-206ENST00000463407 C17orf98A8MV24 154 aa10.77□□□□□ -0.69
NUP58-206ENST00000463407 FAM74A4Q5TZK3 123 aa10.77□□□□□ -0.69
NUP58-206ENST00000463407 LYZL4Q96KX0 146 aa10.77□□□□□ -0.69
NUP58-206ENST00000463407 NABP2Q9BQ15 211 aa10.77□□□□□ -0.69
NUP58-206ENST00000463407 SMDT1Q9H4I9 107 aa10.77□□□□□ -0.69
NUP58-206ENST00000463407 FOXI3A8MTJ6 420 aaPredicted RBP10.76□□□□□ -0.69
NUP58-206ENST00000463407 SGMS2Q8NHU3 365 aa10.76□□□□□ -0.69
NUP58-206ENST00000463407 C21orf62Q9NYP8 219 aa10.76□□□□□ -0.69
NUP58-206ENST00000463407 HERPUD1Q15011 391 aa10.76□□□□□ -0.69
NUP58-206ENST00000463407 PGLYRP4Q96LB8 373 aa10.76□□□□□ -0.69
NUP58-206ENST00000463407 TMEM133Q9H2Q1 129 aa10.76□□□□□ -0.69
NUP58-206ENST00000463407 A0A1B0GTI1 187 aa10.76□□□□□ -0.69
NUP58-206ENST00000463407 TMEM262E9PQX1 116 aa10.76□□□□□ -0.69
NUP58-206ENST00000463407 M0QZK8 103 aa10.76□□□□□ -0.69
NUP58-206ENST00000463407 NBR2O15453 112 aa10.76□□□□□ -0.69
NUP58-206ENST00000463407 MFAP2P55001 183 aa10.76□□□□□ -0.69
NUP58-206ENST00000463407 FGFBP3Q8TAT2 258 aa10.76□□□□□ -0.69
NUP58-206ENST00000463407 PLPPR1Q8TBJ4 325 aa10.76□□□□□ -0.69
NUP58-206ENST00000463407 EIF3GO75821 320 aaKnown RBP eCLIP10.76□□□□□ -0.69
NUP58-206ENST00000463407 ZNF56Q15929 161 aa10.76□□□□□ -0.69
NUP58-206ENST00000463407 ZNF660Q6AZW8 331 aaPredicted RBP10.76□□□□□ -0.69
NUP58-206ENST00000463407 MDS2Q8NDY4 140 aa10.76□□□□□ -0.69
NUP58-206ENST00000463407 SGK494Q96LW2 274 aa10.76□□□□□ -0.69
NUP58-206ENST00000463407 PACRGQ96M98 296 aaPredicted RBP10.76□□□□□ -0.69
NUP58-206ENST00000463407 DOCK6Q96HP0 2047 aa10.76□□□□□ -0.69
NUP58-206ENST00000463407 MEF2BQ02080 365 aaPredicted RBP10.76□□□□□ -0.69
NUP58-206ENST00000463407 MRPL32Q9BYC8 188 aaKnown RBP10.76□□□□□ -0.69
NUP58-206ENST00000463407 MSGN1A6NI15 193 aa10.75□□□□□ -0.69
NUP58-206ENST00000463407 RPS20P60866 119 aaKnown RBP10.75□□□□□ -0.69
NUP58-206ENST00000463407 SSC4DQ8WTU2 575 aa10.75□□□□□ -0.69
NUP58-206ENST00000463407 TRAF4Q9BUZ4 470 aaPredicted RBP10.75□□□□□ -0.69
NUP58-206ENST00000463407 WNT10AQ9GZT5 417 aa10.75□□□□□ -0.69
NUP58-206ENST00000463407 DOCK4Q8N1I0 1966 aa10.75□□□□□ -0.69
NUP58-206ENST00000463407 IGKV3OR2-268A0A0C4DH90 116 aa10.75□□□□□ -0.69
NUP58-206ENST00000463407 HSPB1P04792 205 aaKnown RBP10.75□□□□□ -0.69
NUP58-206ENST00000463407 CD99P14209 185 aa10.75□□□□□ -0.69
NUP58-206ENST00000463407 CKS2P33552 79 aa10.75□□□□□ -0.69
NUP58-206ENST00000463407 RARRES2Q99969 163 aa10.75□□□□□ -0.69
NUP58-206ENST00000463407 IGHV3OR16-8A0A075B7F1 116 aa10.75□□□□□ -0.69
NUP58-206ENST00000463407 K7ENP7 123 aa10.75□□□□□ -0.69
NUP58-206ENST00000463407 RAB24Q969Q5 203 aa10.75□□□□□ -0.69
NUP58-206ENST00000463407 TXNDC17Q9BRA2 123 aa10.75□□□□□ -0.69
NUP58-206ENST00000463407 C1QTNF9BB2RNN3 333 aa10.75□□□□□ -0.69
NUP58-206ENST00000463407 C1QTNF9P0C862 333 aa10.75□□□□□ -0.69
NUP58-206ENST00000463407 IGFBP3P17936 291 aaPredicted RBP10.75□□□□□ -0.69
NUP58-206ENST00000463407 SP5Q6BEB4 398 aaPredicted RBP10.75□□□□□ -0.69
NUP58-206ENST00000463407 FAM166AQ6J272 317 aa10.75□□□□□ -0.69
NUP58-206ENST00000463407 IFI27L2Q9H2X8 130 aa10.75□□□□□ -0.69
NUP58-206ENST00000463407 SAA2-SAA4A0A096LPE2 208 aa10.75□□□□□ -0.69
NUP58-206ENST00000463407 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.75□□□□□ -0.69
NUP58-206ENST00000463407 A0A0B4J293 547 aa10.75□□□□□ -0.69
NUP58-206ENST00000463407 SAA2P0DJI9 122 aaPredicted RBP10.75□□□□□ -0.69
NUP58-206ENST00000463407 GOLT1AQ6ZVE7 132 aa10.75□□□□□ -0.69
NUP58-206ENST00000463407 GPR82Q96P67 336 aa10.75□□□□□ -0.69
NUP58-206ENST00000463407 C19orf24Q9BVV8 132 aa10.75□□□□□ -0.69
NUP58-206ENST00000463407 COL25A1Q9BXS0 654 aaPredicted RBP10.75□□□□□ -0.69
NUP58-206ENST00000463407 CA7P43166 264 aa10.74□□□□□ -0.69
NUP58-206ENST00000463407 TMEM177Q53S58 311 aa10.74□□□□□ -0.69
NUP58-206ENST00000463407 BMPERQ8N8U9 685 aa10.74□□□□□ -0.69
NUP58-206ENST00000463407 C8orf46Q8TAG6 207 aa10.74□□□□□ -0.69
NUP58-206ENST00000463407 ATP5IP56385 69 aaPredicted RBP10.74□□□□□ -0.69
NUP58-206ENST00000463407 EMP1P54849 157 aa10.74□□□□□ -0.69
NUP58-206ENST00000463407 LHFPL5Q8TAF8 219 aa10.74□□□□□ -0.69
NUP58-206ENST00000463407 SRSF12Q8WXF0 261 aaKnown RBP10.74□□□□□ -0.69
NUP58-206ENST00000463407 J3QR89 54 aa10.74□□□□□ -0.69
NUP58-206ENST00000463407 FOXG1P55316 489 aaPredicted RBP10.74□□□□□ -0.69
NUP58-206ENST00000463407 DUX3Q96PT4 197 aa10.74□□□□□ -0.69
NUP58-206ENST00000463407 MBNL2Q5VZF2 373 aaKnown RBP10.74□□□□□ -0.69
NUP58-206ENST00000463407 DMRTA2Q96SC8 542 aa10.74□□□□□ -0.69
NUP58-206ENST00000463407 C9JCJ5 164 aa10.73□□□□□ -0.69
NUP58-206ENST00000463407 HTN3P15516 51 aa10.73□□□□□ -0.69
NUP58-206ENST00000463407 SRSF9Q13242 221 aaKnown RBP eCLIP10.73□□□□□ -0.69
NUP58-206ENST00000463407 Q6ZS92 163 aa10.73□□□□□ -0.69
NUP58-206ENST00000463407 M0R3E3 92 aa10.73□□□□□ -0.69
NUP58-206ENST00000463407 CRYBB3P26998 211 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms