RNA–Protein interactions for RNA: ENST00000463370.5

VAPB-203, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 2,393 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-203ENST00000463370 ZNF137PP52743 207 aa10.38□□□□□ -0.75
VAPB-203ENST00000463370 CLDND2Q8NHS1 167 aa10.38□□□□□ -0.75
VAPB-203ENST00000463370 TMEM186Q96B77 213 aa10.38□□□□□ -0.75
VAPB-203ENST00000463370 C1orf159Q96HA4 380 aa10.38□□□□□ -0.75
VAPB-203ENST00000463370 KIAA1456Q9P272 454 aa10.38□□□□□ -0.75
VAPB-203ENST00000463370 SMCO3A2RU48 225 aa10.38□□□□□ -0.75
VAPB-203ENST00000463370 TMEM8BA6NDV4 472 aa10.38□□□□□ -0.75
VAPB-203ENST00000463370 KBTBD11O94819 623 aa10.38□□□□□ -0.75
VAPB-203ENST00000463370 CA2P00918 260 aa10.38□□□□□ -0.75
VAPB-203ENST00000463370 IGLV1-47P01700 117 aa10.38□□□□□ -0.75
VAPB-203ENST00000463370 COX7A1P24310 79 aa10.38□□□□□ -0.75
VAPB-203ENST00000463370 ICAM4Q14773 271 aa10.38□□□□□ -0.75
VAPB-203ENST00000463370 TMEM177Q53S58 311 aa10.38□□□□□ -0.75
VAPB-203ENST00000463370 TGIF2LXQ8IUE1 241 aa10.38□□□□□ -0.75
VAPB-203ENST00000463370 OR10W1Q8NGF6 305 aa10.38□□□□□ -0.75
VAPB-203ENST00000463370 OR8B3Q8NGG8 313 aa10.38□□□□□ -0.75
VAPB-203ENST00000463370 OSR1Q8TAX0 266 aaPredicted RBP10.38□□□□□ -0.75
VAPB-203ENST00000463370 LHX4Q969G2 390 aa10.38□□□□□ -0.75
VAPB-203ENST00000463370 FLYWCH2Q96CP2 140 aaKnown RBP10.38□□□□□ -0.75
VAPB-203ENST00000463370 OR8B2Q96RD0 313 aa10.38□□□□□ -0.75
VAPB-203ENST00000463370 CLCC1Q96S66 551 aa10.38□□□□□ -0.75
VAPB-203ENST00000463370 PBDC1Q9BVG4 233 aa10.38□□□□□ -0.75
VAPB-203ENST00000463370 UBTD1Q9HAC8 227 aa10.38□□□□□ -0.75
VAPB-203ENST00000463370 PRNDQ9UKY0 176 aa10.38□□□□□ -0.75
VAPB-203ENST00000463370 TIMM9Q9Y5J7 89 aa10.38□□□□□ -0.75
VAPB-203ENST00000463370 ZFYVE26Q68DK2 2539 aa10.38□□□□□ -0.75
VAPB-203ENST00000463370 A0A1B0GW64 132 aa10.37□□□□□ -0.75
VAPB-203ENST00000463370 IGLV2-23P01705 113 aa10.37□□□□□ -0.75
VAPB-203ENST00000463370 IFNA4P05014 189 aa10.37□□□□□ -0.75
VAPB-203ENST00000463370 GCSAMLQ5JQS6 135 aa10.37□□□□□ -0.75
VAPB-203ENST00000463370 SLC24A4Q8NFF2 622 aa10.37□□□□□ -0.75
VAPB-203ENST00000463370 NEIL1Q96FI4 390 aaPredicted RBP10.37□□□□□ -0.75
VAPB-203ENST00000463370 SLC35B3Q9H1N7 401 aa10.37□□□□□ -0.75
VAPB-203ENST00000463370 TPSG1Q9NRR2 321 aa10.37□□□□□ -0.75
VAPB-203ENST00000463370 BET1LQ9NYM9 111 aa10.37□□□□□ -0.75
VAPB-203ENST00000463370 SPTAN1Q13813 2472 aaKnown RBP10.37□□□□□ -0.75
VAPB-203ENST00000463370 TRAV1-1A0A0B4J248 108 aa10.37□□□□□ -0.75
VAPB-203ENST00000463370 AKR1C3P42330 323 aa10.37□□□□□ -0.75
VAPB-203ENST00000463370 ARSJQ5FYB0 599 aaPredicted RBP10.37□□□□□ -0.75
VAPB-203ENST00000463370 FFAR4Q5NUL3 377 aa10.37□□□□□ -0.75
VAPB-203ENST00000463370 C10orf55Q5SWW7 151 aa10.37□□□□□ -0.75
VAPB-203ENST00000463370 ZNF787Q6DD87 383 aa10.37□□□□□ -0.75
VAPB-203ENST00000463370 TREML4Q6UXN2 200 aa10.37□□□□□ -0.75
VAPB-203ENST00000463370 RXFP4Q8TDU9 374 aa10.37□□□□□ -0.75
VAPB-203ENST00000463370 MBD3L1Q8WWY6 194 aa10.37□□□□□ -0.75
VAPB-203ENST00000463370 IGFBPL1Q8WX77 278 aa10.37□□□□□ -0.75
VAPB-203ENST00000463370 SLC25A22Q9H936 323 aa10.37□□□□□ -0.75
VAPB-203ENST00000463370 GNG13Q9P2W3 67 aa10.37□□□□□ -0.75
VAPB-203ENST00000463370 ONECUT1Q9UBC0 465 aa10.37□□□□□ -0.75
VAPB-203ENST00000463370 MIOXQ9UGB7 285 aa10.37□□□□□ -0.75
VAPB-203ENST00000463370 WDR83OSQ9Y284 106 aa10.37□□□□□ -0.75
VAPB-203ENST00000463370 BTBD17A6NE02 478 aa10.36□□□□□ -0.75
VAPB-203ENST00000463370 SNAPINO95295 136 aa10.36□□□□□ -0.75
VAPB-203ENST00000463370 NPY1RP25929 384 aa10.36□□□□□ -0.75
VAPB-203ENST00000463370 RPP30P78346 268 aaKnown RBP10.36□□□□□ -0.75
VAPB-203ENST00000463370 PRCDQ00LT1 54 aa10.36□□□□□ -0.75
VAPB-203ENST00000463370 HLA-DRB5Q30154 266 aa10.36□□□□□ -0.75
VAPB-203ENST00000463370 AKIRIN2Q53H80 203 aa10.36□□□□□ -0.75
VAPB-203ENST00000463370 LDLRAD2Q5SZI1 272 aa10.36□□□□□ -0.75
VAPB-203ENST00000463370 FAM71F2Q6NXP2 309 aa10.36□□□□□ -0.75
VAPB-203ENST00000463370 CLRN3Q8NCR9 226 aa10.36□□□□□ -0.75
VAPB-203ENST00000463370 LY6G5BQ8NDX9 201 aa10.36□□□□□ -0.75
VAPB-203ENST00000463370 OR4C13Q8NGP0 309 aa10.36□□□□□ -0.75
VAPB-203ENST00000463370 C8orf46Q8TAG6 207 aa10.36□□□□□ -0.75
VAPB-203ENST00000463370 NEU4Q8WWR8 484 aaPredicted RBP10.36□□□□□ -0.75
VAPB-203ENST00000463370 RAB1CQ92928 201 aa10.36□□□□□ -0.75
VAPB-203ENST00000463370 FAM122AQ96E09 287 aa10.36□□□□□ -0.75
VAPB-203ENST00000463370 TNCP24821 2201 aa10.36□□□□□ -0.75
VAPB-203ENST00000463370 SCAF4O95104 1147 aaKnown RBP10.36□□□□□ -0.75
VAPB-203ENST00000463370 MOB3BQ86TA1 216 aa10.36□□□□□ -0.75
VAPB-203ENST00000463370 PDPNQ86YL7 162 aa10.36□□□□□ -0.75
VAPB-203ENST00000463370 MGST2Q99735 147 aa10.36□□□□□ -0.75
VAPB-203ENST00000463370 C20orf24Q9BUV8 137 aa10.36□□□□□ -0.75
VAPB-203ENST00000463370 PLEKHA3Q9HB20 300 aa10.36□□□□□ -0.75
VAPB-203ENST00000463370 ZNF257Q9Y2Q1 563 aa10.36□□□□□ -0.75
VAPB-203ENST00000463370 WASHC3Q9Y3C0 194 aa10.36□□□□□ -0.75
VAPB-203ENST00000463370 KPTNQ9Y664 436 aa10.36□□□□□ -0.75
VAPB-203ENST00000463370 CSMD2Q7Z408 3487 aa10.35□□□□□ -0.75
VAPB-203ENST00000463370 MAP1LC3B2A6NCE7 125 aa10.35□□□□□ -0.75
VAPB-203ENST00000463370 ZFP92A6NM28 416 aa10.35□□□□□ -0.75
VAPB-203ENST00000463370 HBE1P02100 147 aa10.35□□□□□ -0.75
VAPB-203ENST00000463370 AGAP20933 346 aa10.35□□□□□ -0.75
VAPB-203ENST00000463370 CNTFRP26992 372 aa10.35□□□□□ -0.75
VAPB-203ENST00000463370 CEBPGP53567 150 aa10.35□□□□□ -0.75
VAPB-203ENST00000463370 ARF6P62330 175 aa10.35□□□□□ -0.75
VAPB-203ENST00000463370 MRGPRG-AS1Q2M3A8 158 aa10.35□□□□□ -0.75
VAPB-203ENST00000463370 ZNF506Q5JVG8 444 aa10.35□□□□□ -0.75
VAPB-203ENST00000463370 OR4P4Q8NGL7 312 aa10.35□□□□□ -0.75
VAPB-203ENST00000463370 OR10G4Q8NGN3 311 aa10.35□□□□□ -0.75
VAPB-203ENST00000463370 OR10G9Q8NGN4 311 aa10.35□□□□□ -0.75
VAPB-203ENST00000463370 OR10G7Q8NGN6 311 aa10.35□□□□□ -0.75
VAPB-203ENST00000463370 TIMD4Q96H15 378 aa10.35□□□□□ -0.75
VAPB-203ENST00000463370 MAP1LC3BQ9GZQ8 125 aa10.35□□□□□ -0.75
VAPB-203ENST00000463370 TMPRSS5Q9H3S3 457 aa10.35□□□□□ -0.75
VAPB-203ENST00000463370 CHODLQ9H9P2 273 aa10.35□□□□□ -0.75
VAPB-203ENST00000463370 ENY2Q9NPA8 101 aa10.35□□□□□ -0.75
VAPB-203ENST00000463370 SIRT7Q9NRC8 400 aa10.35□□□□□ -0.75
VAPB-203ENST00000463370 UTP20O75691 2785 aaKnown RBP10.35□□□□□ -0.75
VAPB-203ENST00000463370 CGB1A6NKQ9 187 aa10.34□□□□□ -0.75
VAPB-203ENST00000463370 BUB1B-PAK6H3BSN5 160 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms