RNA–Protein interactions for RNA: ENST00000462668.5

SMC4-203, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 4,235 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-203ENST00000462668 OR12D1P0DN82 309 aa1.82□□□□□ -2.12
SMC4-203ENST00000462668 CTLA4P16410 223 aa1.82□□□□□ -2.12
SMC4-203ENST00000462668 BTN1A1Q13410 526 aa1.82□□□□□ -2.12
SMC4-203ENST00000462668 SLC9A3R2Q15599 337 aa1.82□□□□□ -2.12
SMC4-203ENST00000462668 ZNF79Q15937 498 aa1.82□□□□□ -2.12
SMC4-203ENST00000462668 ZNF283Q8N7M2 679 aa1.82□□□□□ -2.12
SMC4-203ENST00000462668 RASSF5Q8WWW0 418 aa1.82□□□□□ -2.12
SMC4-203ENST00000462668 CCL13Q99616 98 aa1.82□□□□□ -2.12
SMC4-203ENST00000462668 PCYT1BQ9Y5K3 369 aaPredicted RBP1.82□□□□□ -2.12
SMC4-203ENST00000462668 ZNF780BQ9Y6R6 833 aa1.82□□□□□ -2.12
SMC4-203ENST00000462668 TRAV26-2A0A0B4J265 109 aa1.82□□□□□ -2.12
SMC4-203ENST00000462668 C16orf90A8MZG2 172 aa1.82□□□□□ -2.12
SMC4-203ENST00000462668 M0R381 172 aa1.82□□□□□ -2.12
SMC4-203ENST00000462668 OPN1SWP03999 348 aa1.82□□□□□ -2.12
SMC4-203ENST00000462668 ZBTB25P24278 435 aa1.82□□□□□ -2.12
SMC4-203ENST00000462668 G6PCP35575 357 aa1.82□□□□□ -2.12
SMC4-203ENST00000462668 ZNF83P51522 516 aa1.82□□□□□ -2.12
SMC4-203ENST00000462668 HERVK_113P63121 156 aa1.82□□□□□ -2.12
SMC4-203ENST00000462668 RSU1Q15404 277 aa1.82□□□□□ -2.12
SMC4-203ENST00000462668 S100A7AQ86SG5 101 aa1.82□□□□□ -2.12
SMC4-203ENST00000462668 UBL4BQ8N7F7 174 aa1.82□□□□□ -2.12
SMC4-203ENST00000462668 SGMS2Q8NHU3 365 aa1.82□□□□□ -2.12
SMC4-203ENST00000462668 SFRP2Q96HF1 295 aa1.82□□□□□ -2.12
SMC4-203ENST00000462668 OR52B2Q96RD2 323 aa1.82□□□□□ -2.12
SMC4-203ENST00000462668 MED18Q9BUE0 208 aa1.82□□□□□ -2.12
SMC4-203ENST00000462668 MED28Q9H204 178 aa1.82□□□□□ -2.12
SMC4-203ENST00000462668 WFDC1Q9HC57 220 aa1.82□□□□□ -2.12
SMC4-203ENST00000462668 ZNF331Q9NQX6 463 aaPredicted RBP1.82□□□□□ -2.12
SMC4-203ENST00000462668 TAS2R1Q9NYW7 299 aa1.82□□□□□ -2.12
SMC4-203ENST00000462668 ZNF222Q9UK12 451 aa1.82□□□□□ -2.12
SMC4-203ENST00000462668 COQ4Q9Y3A0 265 aa1.82□□□□□ -2.12
SMC4-203ENST00000462668 HDGFL3Q9Y3E1 203 aa1.82□□□□□ -2.12
SMC4-203ENST00000462668 CSMD3Q7Z407 3707 aa1.82□□□□□ -2.12
SMC4-203ENST00000462668 NUP98P52948 1817 aa1.82□□□□□ -2.12
SMC4-203ENST00000462668 DOCK5Q9H7D0 1870 aa1.81□□□□□ -2.12
SMC4-203ENST00000462668 A0A1B0GV50 99 aa1.81□□□□□ -2.12
SMC4-203ENST00000462668 OR4A8P0C604 315 aa1.81□□□□□ -2.12
SMC4-203ENST00000462668 HOXC5Q00444 222 aa1.81□□□□□ -2.12
SMC4-203ENST00000462668 SHANK2-AS3Q9BTD1 123 aa1.81□□□□□ -2.12
SMC4-203ENST00000462668 RPUSD1Q9UJJ7 312 aaKnown RBP1.81□□□□□ -2.12
SMC4-203ENST00000462668 PRELID3BQ9Y3B1 194 aa1.81□□□□□ -2.12
SMC4-203ENST00000462668 FIS1Q9Y3D6 152 aa1.81□□□□□ -2.12
SMC4-203ENST00000462668 RYR3Q15413 4870 aa1.81□□□□□ -2.12
SMC4-203ENST00000462668 HECTD4Q9Y4D8 3996 aa1.81□□□□□ -2.12
SMC4-203ENST00000462668 NYNRINQ9P2P1 1898 aaKnown RBP1.81□□□□□ -2.12
SMC4-203ENST00000462668 A0A1B0GW54 56 aa1.81□□□□□ -2.12
SMC4-203ENST00000462668 A8MWP4 228 aa1.81□□□□□ -2.12
SMC4-203ENST00000462668 RPSAP08865 295 aaKnown RBP1.81□□□□□ -2.12
SMC4-203ENST00000462668 JOSD1Q15040 202 aaPredicted RBP1.81□□□□□ -2.12
SMC4-203ENST00000462668 EBLN2Q6P2I7 272 aa1.81□□□□□ -2.12
SMC4-203ENST00000462668 PRSS54Q6PEW0 395 aa1.81□□□□□ -2.12
SMC4-203ENST00000462668 RASSF6Q6ZTQ3 369 aa1.81□□□□□ -2.12
SMC4-203ENST00000462668 OR11H6Q8NGC7 330 aa1.81□□□□□ -2.12
SMC4-203ENST00000462668 OR10A6Q8NH74 314 aa1.81□□□□□ -2.12
SMC4-203ENST00000462668 APOBEC3DQ96AK3 386 aaPredicted RBP1.81□□□□□ -2.12
SMC4-203ENST00000462668 GPR75O95800 540 aa1.81□□□□□ -2.12
SMC4-203ENST00000462668 PSME3P61289 254 aa1.81□□□□□ -2.12
SMC4-203ENST00000462668 DEFB115Q30KQ5 88 aa1.81□□□□□ -2.12
SMC4-203ENST00000462668 NXNL2Q5VZ03 156 aa1.81□□□□□ -2.12
SMC4-203ENST00000462668 DAZ4Q86SG3 579 aaKnown RBP1.81□□□□□ -2.12
SMC4-203ENST00000462668 C20orf196Q8IYI0 205 aa1.81□□□□□ -2.12
SMC4-203ENST00000462668 OR13C8Q8NGS7 320 aa1.81□□□□□ -2.12
SMC4-203ENST00000462668 INIPQ9NRY2 104 aa1.81□□□□□ -2.12
SMC4-203ENST00000462668 ZNF292O60281 2723 aa1.81□□□□□ -2.12
SMC4-203ENST00000462668 IGHV3OR16-8A0A075B7F1 116 aa1.8□□□□□ -2.12
SMC4-203ENST00000462668 LECT2O14960 151 aa1.8□□□□□ -2.12
SMC4-203ENST00000462668 DEDDO75618 318 aa1.8□□□□□ -2.12
SMC4-203ENST00000462668 KCNK2O95069 426 aa1.8□□□□□ -2.12
SMC4-203ENST00000462668 CGAP01215 116 aa1.8□□□□□ -2.12
SMC4-203ENST00000462668 FGF6P10767 208 aa1.8□□□□□ -2.12
SMC4-203ENST00000462668 CD79AP11912 226 aa1.8□□□□□ -2.12
SMC4-203ENST00000462668 LINC01551Q86U37 167 aa1.8□□□□□ -2.12
SMC4-203ENST00000462668 PDPNQ86YL7 162 aa1.8□□□□□ -2.12
SMC4-203ENST00000462668 GPHB5Q86YW7 130 aa1.8□□□□□ -2.12
SMC4-203ENST00000462668 NATD1Q8N6N6 113 aa1.8□□□□□ -2.12
SMC4-203ENST00000462668 ZNF615Q8N8J6 731 aa1.8□□□□□ -2.12
SMC4-203ENST00000462668 OR2T4Q8NH00 348 aa1.8□□□□□ -2.12
SMC4-203ENST00000462668 MUC7Q8TAX7 377 aa1.8□□□□□ -2.12
SMC4-203ENST00000462668 NKX6-2Q9C056 277 aaPredicted RBP1.8□□□□□ -2.12
SMC4-203ENST00000462668 MYO10Q9HD67 2058 aa1.8□□□□□ -2.12
SMC4-203ENST00000462668 DOCK2Q92608 1830 aa1.8□□□□□ -2.12
SMC4-203ENST00000462668 COL4A2P08572 1712 aa1.8□□□□□ -2.12
SMC4-203ENST00000462668 KIF24Q5T7B8 1368 aa1.8□□□□□ -2.12
SMC4-203ENST00000462668 PRORSD1PA6NEY8 169 aa1.8□□□□□ -2.12
SMC4-203ENST00000462668 OR5H14A6NHG9 310 aa1.8□□□□□ -2.12
SMC4-203ENST00000462668 SIGLEC16A6NMB1 481 aa1.8□□□□□ -2.12
SMC4-203ENST00000462668 OR4C45A6NMZ5 311 aa1.8□□□□□ -2.12
SMC4-203ENST00000462668 A8MUN3 132 aa1.8□□□□□ -2.12
SMC4-203ENST00000462668 IGLL5B9A064 214 aa1.8□□□□□ -2.12
SMC4-203ENST00000462668 C11orf94C9JXX5 98 aa1.8□□□□□ -2.12
SMC4-203ENST00000462668 LST1O00453 97 aa1.8□□□□□ -2.12
SMC4-203ENST00000462668 CD7P09564 240 aa1.8□□□□□ -2.12
SMC4-203ENST00000462668 SCGB1C2P0DMR2 95 aa1.8□□□□□ -2.12
SMC4-203ENST00000462668 G0S2P27469 103 aa1.8□□□□□ -2.12
SMC4-203ENST00000462668 MPV17P39210 176 aa1.8□□□□□ -2.12
SMC4-203ENST00000462668 TMEM78Q5T7P6 136 aa1.8□□□□□ -2.12
SMC4-203ENST00000462668 OOSP2Q86WS3 158 aa1.8□□□□□ -2.12
SMC4-203ENST00000462668 UMODL1-AS1Q8N2C9 162 aa1.8□□□□□ -2.12
SMC4-203ENST00000462668 OR8B12Q8NGG6 310 aa1.8□□□□□ -2.12
SMC4-203ENST00000462668 SCGB1C1Q8TD33 95 aa1.8□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms