RNA–Protein interactions for RNA: ENST00000462604.1

COL8A1-204, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 3

Gene COL8A1, Length 190 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-204ENST00000462604 OCC1Q8TAD7 63 aa2.91□□□□□ -1.94
COL8A1-204ENST00000462604 YPEL2Q96QA6 119 aa2.91□□□□□ -1.94
COL8A1-204ENST00000462604 TRIB1Q96RU8 372 aa2.91□□□□□ -1.94
COL8A1-204ENST00000462604 RNF2Q99496 336 aa2.91□□□□□ -1.94
COL8A1-204ENST00000462604 C19orf24Q9BVV8 132 aa2.91□□□□□ -1.94
COL8A1-204ENST00000462604 HINT2Q9BX68 163 aa2.91□□□□□ -1.94
COL8A1-204ENST00000462604 SPRY4Q9C004 299 aa2.91□□□□□ -1.94
COL8A1-204ENST00000462604 OPN3Q9H1Y3 402 aaPredicted RBP2.91□□□□□ -1.94
COL8A1-204ENST00000462604 IFI27L2Q9H2X8 130 aa2.91□□□□□ -1.94
COL8A1-204ENST00000462604 PLEKHA3Q9HB20 300 aa2.91□□□□□ -1.94
COL8A1-204ENST00000462604 OSTCQ9NRP0 149 aa2.91□□□□□ -1.94
COL8A1-204ENST00000462604 SLC35D1Q9NTN3 355 aa2.91□□□□□ -1.94
COL8A1-204ENST00000462604 CALYQ9NYX4 217 aa2.91□□□□□ -1.94
COL8A1-204ENST00000462604 CLCF1Q9UBD9 225 aa2.91□□□□□ -1.94
COL8A1-204ENST00000462604 UQCR10Q9UDW1 63 aa2.91□□□□□ -1.94
COL8A1-204ENST00000462604 IL19Q9UHD0 177 aa2.91□□□□□ -1.94
COL8A1-204ENST00000462604 DUSP13Q9UII6 198 aa2.91□□□□□ -1.94
COL8A1-204ENST00000462604 METRNQ9UJH8 293 aa2.91□□□□□ -1.94
COL8A1-204ENST00000462604 PRNDQ9UKY0 176 aa2.91□□□□□ -1.94
COL8A1-204ENST00000462604 PAM16Q9Y3D7 125 aa2.91□□□□□ -1.94
COL8A1-204ENST00000462604 GOLT1BQ9Y3E0 138 aa2.91□□□□□ -1.94
COL8A1-204ENST00000462604 LSM4Q9Y4Z0 139 aaKnown RBP2.91□□□□□ -1.94
COL8A1-204ENST00000462604 OR51B2Q9Y5P1 312 aa2.91□□□□□ -1.94
COL8A1-204ENST00000462604 V9GYV3 84 aa2.91□□□□□ -1.94
COL8A1-204ENST00000462604 DOCK9Q9BZ29 2069 aa2.91□□□□□ -1.94
COL8A1-204ENST00000462604 FREM3P0C091 2139 aa2.9□□□□□ -1.94
COL8A1-204ENST00000462604 SPTBN5Q9NRC6 3674 aaKnown RBP2.9□□□□□ -1.95
COL8A1-204ENST00000462604 ARHGEF17Q96PE2 2063 aaPredicted RBP2.9□□□□□ -1.95
COL8A1-204ENST00000462604 IGKV1D-17A0A075B6S4 117 aa2.9□□□□□ -1.95
COL8A1-204ENST00000462604 SAA2-SAA4A0A096LPE2 208 aa2.9□□□□□ -1.95
COL8A1-204ENST00000462604 IGHV2OR16-5A0A0B4J2B6 119 aa2.9□□□□□ -1.95
COL8A1-204ENST00000462604 C20orf202A1L168 122 aa2.9□□□□□ -1.95
COL8A1-204ENST00000462604 IZUMO1RA6ND01 250 aa2.9□□□□□ -1.95
COL8A1-204ENST00000462604 HELTA6NFD8 242 aa2.9□□□□□ -1.95
COL8A1-204ENST00000462604 ISLRO14498 428 aa2.9□□□□□ -1.95
COL8A1-204ENST00000462604 DLEU1O43261 78 aa2.9□□□□□ -1.95
COL8A1-204ENST00000462604 NUPR1O60356 82 aa2.9□□□□□ -1.95
COL8A1-204ENST00000462604 OR7C2O60412 319 aa2.9□□□□□ -1.95
COL8A1-204ENST00000462604 ZNF253O75346 499 aa2.9□□□□□ -1.95
COL8A1-204ENST00000462604 FOXH1O75593 365 aa2.9□□□□□ -1.95
COL8A1-204ENST00000462604 ACTL6BO94805 426 aa2.9□□□□□ -1.95
COL8A1-204ENST00000462604 AGFG2O95081 481 aa2.9□□□□□ -1.95
COL8A1-204ENST00000462604 GOSR1O95249 250 aa2.9□□□□□ -1.95
COL8A1-204ENST00000462604 CA2P00918 260 aa2.9□□□□□ -1.95
COL8A1-204ENST00000462604 CGAP01215 116 aa2.9□□□□□ -1.95
COL8A1-204ENST00000462604 IGKV3-15P01624 115 aa2.9□□□□□ -1.95
COL8A1-204ENST00000462604 REG1AP05451 166 aa2.9□□□□□ -1.95
COL8A1-204ENST00000462604 GPX1P07203 203 aa2.9□□□□□ -1.95
COL8A1-204ENST00000462604 CECR9P0C854 216 aa2.9□□□□□ -1.95
COL8A1-204ENST00000462604 SAA2P0DJI9 122 aaPredicted RBP2.9□□□□□ -1.95
COL8A1-204ENST00000462604 MGST1P10620 155 aaKnown RBP2.9□□□□□ -1.95
COL8A1-204ENST00000462604 IRF2P14316 349 aa2.9□□□□□ -1.95
COL8A1-204ENST00000462604 IGFBP2P18065 325 aa2.9□□□□□ -1.95
COL8A1-204ENST00000462604 PMCHP20382 165 aa2.9□□□□□ -1.95
COL8A1-204ENST00000462604 CRYBB3P26998 211 aa2.9□□□□□ -1.95
COL8A1-204ENST00000462604 SRIP30626 198 aa2.9□□□□□ -1.95
COL8A1-204ENST00000462604 CDKN1AP38936 164 aa2.9□□□□□ -1.95
COL8A1-204ENST00000462604 PLA2G5P39877 138 aa2.9□□□□□ -1.95
COL8A1-204ENST00000462604 AMTP48728 403 aa2.9□□□□□ -1.95
COL8A1-204ENST00000462604 FABP6P51161 128 aa2.9□□□□□ -1.95
COL8A1-204ENST00000462604 HNRNPA3P51991 378 aaKnown RBP2.9□□□□□ -1.95
COL8A1-204ENST00000462604 UBE2L3P68036 154 aaKnown RBP2.9□□□□□ -1.95
COL8A1-204ENST00000462604 CX3CL1P78423 397 aa2.9□□□□□ -1.95
COL8A1-204ENST00000462604 MRPS11P82912 194 aaKnown RBP2.9□□□□□ -1.95
COL8A1-204ENST00000462604 PRR20EP86478 221 aa2.9□□□□□ -1.95
COL8A1-204ENST00000462604 PRR20CP86479 221 aa2.9□□□□□ -1.95
COL8A1-204ENST00000462604 PRR20DP86480 221 aa2.9□□□□□ -1.95
COL8A1-204ENST00000462604 PRR20BP86481 221 aa2.9□□□□□ -1.95
COL8A1-204ENST00000462604 PRR20AP86496 221 aa2.9□□□□□ -1.95
COL8A1-204ENST00000462604 PRCDQ00LT1 54 aa2.9□□□□□ -1.95
COL8A1-204ENST00000462604 RELQ04864 619 aaPredicted RBP2.9□□□□□ -1.95
COL8A1-204ENST00000462604 CR1LQ2VPA4 569 aa2.9□□□□□ -1.95
COL8A1-204ENST00000462604 SPATA45Q537H7 98 aa2.9□□□□□ -1.95
COL8A1-204ENST00000462604 ARSJQ5FYB0 599 aaPredicted RBP2.9□□□□□ -1.95
COL8A1-204ENST00000462604 FAM162BQ5T6X4 162 aa2.9□□□□□ -1.95
COL8A1-204ENST00000462604 SPATA31B1PQ5VZV4 182 aa2.9□□□□□ -1.95
COL8A1-204ENST00000462604 OR4A47Q6IF82 309 aa2.9□□□□□ -1.95
COL8A1-204ENST00000462604 Q6ZR03 302 aa2.9□□□□□ -1.95
COL8A1-204ENST00000462604 TMEM136Q6ZRR5 245 aa2.9□□□□□ -1.95
COL8A1-204ENST00000462604 C19orf35Q6ZS72 473 aa2.9□□□□□ -1.95
COL8A1-204ENST00000462604 MIR17HGQ75NE6 70 aa2.9□□□□□ -1.95
COL8A1-204ENST00000462604 VKORC1L1Q8N0U8 176 aa2.9□□□□□ -1.95
COL8A1-204ENST00000462604 ABHD12Q8N2K0 398 aa2.9□□□□□ -1.95
COL8A1-204ENST00000462604 PNKDQ8N490 385 aa2.9□□□□□ -1.95
COL8A1-204ENST00000462604 CD177Q8N6Q3 437 aa2.9□□□□□ -1.95
COL8A1-204ENST00000462604 KLHDC1Q8N7A1 406 aa2.9□□□□□ -1.95
COL8A1-204ENST00000462604 TMEM105Q8N8V8 129 aa2.9□□□□□ -1.95
COL8A1-204ENST00000462604 OR2Z1Q8NG97 314 aa2.9□□□□□ -1.95
COL8A1-204ENST00000462604 OR1L4Q8NGR5 311 aa2.9□□□□□ -1.95
COL8A1-204ENST00000462604 Q8TCH9 128 aa2.9□□□□□ -1.95
COL8A1-204ENST00000462604 VN1R17PQ8TDU5 208 aa2.9□□□□□ -1.95
COL8A1-204ENST00000462604 BORCS7Q96B45 105 aa2.9□□□□□ -1.95
COL8A1-204ENST00000462604 STARD4Q96DR4 205 aa2.9□□□□□ -1.95
COL8A1-204ENST00000462604 C1orf159Q96HA4 380 aa2.9□□□□□ -1.95
COL8A1-204ENST00000462604 CDX2Q99626 313 aaPredicted RBP2.9□□□□□ -1.95
COL8A1-204ENST00000462604 TXN2Q99757 166 aa2.9□□□□□ -1.95
COL8A1-204ENST00000462604 DCTN5Q9BTE1 182 aa2.9□□□□□ -1.95
COL8A1-204ENST00000462604 FAM103A1Q9BTL3 118 aaKnown RBP2.9□□□□□ -1.95
COL8A1-204ENST00000462604 TMEM208Q9BTX3 173 aa2.9□□□□□ -1.95
COL8A1-204ENST00000462604 CHRDL1Q9BU40 450 aa2.9□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms