RNA–Protein interactions for RNA: ENST00000462429.1

VPS41-210, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 3

Gene VPS41, Length 347 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-210ENST00000462429 OR2T27Q8NH04 317 aa2.3□□□□□ -2.04
VPS41-210ENST00000462429 OR52N1Q8NH53 320 aa2.3□□□□□ -2.04
VPS41-210ENST00000462429 PATE1Q8WXA2 126 aa2.3□□□□□ -2.04
VPS41-210ENST00000462429 RMI2Q96E14 147 aa2.3□□□□□ -2.04
VPS41-210ENST00000462429 MED18Q9BUE0 208 aa2.3□□□□□ -2.04
VPS41-210ENST00000462429 CCDC32Q9BV29 185 aa2.3□□□□□ -2.04
VPS41-210ENST00000462429 OR8D2Q9GZM6 311 aa2.3□□□□□ -2.04
VPS41-210ENST00000462429 C6orf62Q9GZU0 229 aaPredicted RBP2.3□□□□□ -2.04
VPS41-210ENST00000462429 TCEAL2Q9H3H9 227 aaPredicted RBP2.3□□□□□ -2.04
VPS41-210ENST00000462429 FAM60AQ9NP50 221 aa2.3□□□□□ -2.04
VPS41-210ENST00000462429 C12orf4Q9NQ89 552 aa2.3□□□□□ -2.04
VPS41-210ENST00000462429 NDUFB11Q9NX14 153 aa2.3□□□□□ -2.04
VPS41-210ENST00000462429 BABAM2Q9NXR7 383 aa2.3□□□□□ -2.04
VPS41-210ENST00000462429 PRO0628Q9UI54 55 aa2.3□□□□□ -2.04
VPS41-210ENST00000462429 FANCMQ8IYD8 2048 aa2.3□□□□□ -2.04
VPS41-210ENST00000462429 SCN3AQ9NY46 2000 aa2.29□□□□□ -2.04
VPS41-210ENST00000462429 ATG2AQ2TAZ0 1938 aa2.29□□□□□ -2.04
VPS41-210ENST00000462429 TRDV1A0A1B0GX56 115 aa2.29□□□□□ -2.04
VPS41-210ENST00000462429 A0A1W2PRG6 482 aa2.29□□□□□ -2.04
VPS41-210ENST00000462429 FABP12A6NFH5 140 aa2.29□□□□□ -2.04
VPS41-210ENST00000462429 RBFOX3A6NFN3 312 aa2.29□□□□□ -2.04
VPS41-210ENST00000462429 OR6C70A6NIJ9 312 aa2.29□□□□□ -2.04
VPS41-210ENST00000462429 ZNF670-ZNF695F2Z2N8 137 aa2.29□□□□□ -2.04
VPS41-210ENST00000462429 BHLHE40O14503 412 aa2.29□□□□□ -2.04
VPS41-210ENST00000462429 PDCD5O14737 125 aa2.29□□□□□ -2.04
VPS41-210ENST00000462429 LDOC1O95751 146 aaPredicted RBP2.29□□□□□ -2.04
VPS41-210ENST00000462429 STATHP02808 62 aa2.29□□□□□ -2.04
VPS41-210ENST00000462429 CD2P06729 351 aa2.29□□□□□ -2.04
VPS41-210ENST00000462429 HTR1AP08908 422 aa2.29□□□□□ -2.04
VPS41-210ENST00000462429 IL9P15248 144 aa2.29□□□□□ -2.04
VPS41-210ENST00000462429 CELP19835 753 aa2.29□□□□□ -2.04
VPS41-210ENST00000462429 M6PRP20645 277 aa2.29□□□□□ -2.04
VPS41-210ENST00000462429 CRABP1P29762 137 aa2.29□□□□□ -2.04
VPS41-210ENST00000462429 ETV6P41212 452 aa2.29□□□□□ -2.04
VPS41-210ENST00000462429 MAP2K4P45985 399 aa2.29□□□□□ -2.04
VPS41-210ENST00000462429 DNASE1L1P49184 302 aa2.29□□□□□ -2.04
VPS41-210ENST00000462429 POLR2HP52434 150 aaKnown RBP2.29□□□□□ -2.04
VPS41-210ENST00000462429 EMP2P54851 167 aa2.29□□□□□ -2.04
VPS41-210ENST00000462429 LSM3P62310 102 aaKnown RBP2.29□□□□□ -2.04
VPS41-210ENST00000462429 PPP3R1P63098 170 aa2.29□□□□□ -2.04
VPS41-210ENST00000462429 PLCXD2Q0VAA5 305 aa2.29□□□□□ -2.04
VPS41-210ENST00000462429 FUT5Q11128 374 aa2.29□□□□□ -2.04
VPS41-210ENST00000462429 DEFB110Q30KQ9 67 aa2.29□□□□□ -2.04
VPS41-210ENST00000462429 TMEM31Q5JXX7 168 aa2.29□□□□□ -2.04
VPS41-210ENST00000462429 CLEC12AQ5QGZ9 265 aa2.29□□□□□ -2.04
VPS41-210ENST00000462429 DNLZQ5SXM8 178 aa2.29□□□□□ -2.04
VPS41-210ENST00000462429 HACD4Q5VWC8 232 aa2.29□□□□□ -2.04
VPS41-210ENST00000462429 RPL22L1Q6P5R6 122 aaKnown RBP2.29□□□□□ -2.04
VPS41-210ENST00000462429 XKRXQ6PP77 449 aa2.29□□□□□ -2.04
VPS41-210ENST00000462429 SSX6Q7RTT6 188 aa2.29□□□□□ -2.04
VPS41-210ENST00000462429 GRINAQ7Z429 371 aa2.29□□□□□ -2.04
VPS41-210ENST00000462429 SELENOHQ8IZQ5 122 aaKnown RBP2.29□□□□□ -2.04
VPS41-210ENST00000462429 GAPTQ8N292 157 aa2.29□□□□□ -2.04
VPS41-210ENST00000462429 SLC25A45Q8N413 288 aa2.29□□□□□ -2.04
VPS41-210ENST00000462429 DEFB123Q8N688 67 aa2.29□□□□□ -2.04
VPS41-210ENST00000462429 DEFB119Q8N690 84 aa2.29□□□□□ -2.04
VPS41-210ENST00000462429 GDPD1Q8N9F7 314 aa2.29□□□□□ -2.04
VPS41-210ENST00000462429 OR2AE1Q8NHA4 323 aa2.29□□□□□ -2.04
VPS41-210ENST00000462429 DYNC2LI1Q8TCX1 351 aa2.29□□□□□ -2.04
VPS41-210ENST00000462429 BLNKQ8WV28 456 aa2.29□□□□□ -2.04
VPS41-210ENST00000462429 ASB17Q8WXJ9 295 aa2.29□□□□□ -2.04
VPS41-210ENST00000462429 DDIT4LQ96D03 193 aa2.29□□□□□ -2.04
VPS41-210ENST00000462429 FXYD5Q96DB9 178 aa2.29□□□□□ -2.04
VPS41-210ENST00000462429 FMC1Q96HJ9 113 aa2.29□□□□□ -2.04
VPS41-210ENST00000462429 IP6K3Q96PC2 410 aa2.29□□□□□ -2.04
VPS41-210ENST00000462429 ERMAPQ96PL5 475 aaPredicted RBP2.29□□□□□ -2.04
VPS41-210ENST00000462429 ZNF426Q9BUY5 554 aa2.29□□□□□ -2.04
VPS41-210ENST00000462429 TAPBPLQ9BX59 468 aa2.29□□□□□ -2.04
VPS41-210ENST00000462429 AICDAQ9GZX7 198 aa2.29□□□□□ -2.04
VPS41-210ENST00000462429 OR51V1Q9H2C8 321 aa2.29□□□□□ -2.04
VPS41-210ENST00000462429 PRO3102Q9H379 93 aa2.29□□□□□ -2.04
VPS41-210ENST00000462429 DSN1Q9H410 356 aa2.29□□□□□ -2.04
VPS41-210ENST00000462429 LINC00574Q9H8X3 128 aa2.29□□□□□ -2.04
VPS41-210ENST00000462429 WDR54Q9H977 334 aa2.29□□□□□ -2.04
VPS41-210ENST00000462429 DNAJC27Q9NZQ0 273 aa2.29□□□□□ -2.04
VPS41-210ENST00000462429 KLF13Q9Y2Y9 288 aaPredicted RBP2.29□□□□□ -2.04
VPS41-210ENST00000462429 ZNF706Q9Y5V0 76 aaPredicted RBP2.29□□□□□ -2.04
VPS41-210ENST00000462429 S4R3C0 116 aa2.29□□□□□ -2.04
VPS41-210ENST00000462429 IGKV1D-17A0A075B6S4 117 aa2.28□□□□□ -2.04
VPS41-210ENST00000462429 TRAV36DV7A0A075B6V5 113 aa2.28□□□□□ -2.04
VPS41-210ENST00000462429 IGKV3D-11A0A0A0MRZ8 115 aa2.28□□□□□ -2.04
VPS41-210ENST00000462429 A0A1B0GWA3 101 aa2.28□□□□□ -2.04
VPS41-210ENST00000462429 TMEM72A0PK05 275 aa2.28□□□□□ -2.04
VPS41-210ENST00000462429 METTL15A6NJ78 407 aa2.28□□□□□ -2.04
VPS41-210ENST00000462429 A8MUU9 505 aa2.28□□□□□ -2.04
VPS41-210ENST00000462429 A8MWL6 223 aa2.28□□□□□ -2.04
VPS41-210ENST00000462429 C4orf51C9J302 202 aa2.28□□□□□ -2.04
VPS41-210ENST00000462429 J3QLW9 94 aa2.28□□□□□ -2.04
VPS41-210ENST00000462429 ZNF593O00488 134 aaPredicted RBP2.28□□□□□ -2.04
VPS41-210ENST00000462429 SULT1C4O75897 302 aa2.28□□□□□ -2.04
VPS41-210ENST00000462429 AHSA1O95433 338 aa2.28□□□□□ -2.04
VPS41-210ENST00000462429 CST4P01036 141 aa2.28□□□□□ -2.04
VPS41-210ENST00000462429 IGKV1-17P01599 117 aa2.28□□□□□ -2.04
VPS41-210ENST00000462429 CD8AP01732 235 aa2.28□□□□□ -2.04
VPS41-210ENST00000462429 APOC1P02654 83 aa2.28□□□□□ -2.04
VPS41-210ENST00000462429 CD14P08571 375 aa2.28□□□□□ -2.04
VPS41-210ENST00000462429 GADD45AP24522 165 aa2.28□□□□□ -2.04
VPS41-210ENST00000462429 EVI2BP34910 448 aa2.28□□□□□ -2.04
VPS41-210ENST00000462429 TGFBR2P37173 567 aa2.28□□□□□ -2.04
VPS41-210ENST00000462429 GABRA4P48169 554 aa2.28□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms