RNA–Protein interactions for RNA: ENST00000461897.5

COL4A6-204, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best)

Gene COL4A6, Length 1,889 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-204ENST00000461897 ZDHHC16Q969W1 377 aa10.26□□□□□ -0.77
COL4A6-204ENST00000461897 C14orf144Q96I85 54 aa10.26□□□□□ -0.77
COL4A6-204ENST00000461897 OR4F4Q96R69 305 aa10.26□□□□□ -0.77
COL4A6-204ENST00000461897 IMMP2LQ96T52 175 aa10.26□□□□□ -0.77
COL4A6-204ENST00000461897 HIVEP3Q5T1R4 2406 aa10.26□□□□□ -0.77
COL4A6-204ENST00000461897 ANKHD1Q8IWZ3 2542 aaKnown RBP10.26□□□□□ -0.77
COL4A6-204ENST00000461897 E7EQL1 145 aa10.25□□□□□ -0.77
COL4A6-204ENST00000461897 MPDU1O75352 247 aa10.25□□□□□ -0.77
COL4A6-204ENST00000461897 GYPAP02724 150 aa10.25□□□□□ -0.77
COL4A6-204ENST00000461897 ADH4P08319 380 aa10.25□□□□□ -0.77
COL4A6-204ENST00000461897 CDC34P49427 236 aaPredicted RBP10.25□□□□□ -0.77
COL4A6-204ENST00000461897 AESQ08117 197 aa10.25□□□□□ -0.77
COL4A6-204ENST00000461897 FAM90A1Q86YD7 464 aa10.25□□□□□ -0.77
COL4A6-204ENST00000461897 OR52E5Q8NH55 327 aa10.25□□□□□ -0.77
COL4A6-204ENST00000461897 GATAD1Q8WUU5 269 aa10.25□□□□□ -0.77
COL4A6-204ENST00000461897 BTF3L4Q96K17 158 aa10.25□□□□□ -0.77
COL4A6-204ENST00000461897 TXNDC17Q9BRA2 123 aa10.25□□□□□ -0.77
COL4A6-204ENST00000461897 CHODLQ9H9P2 273 aa10.25□□□□□ -0.77
COL4A6-204ENST00000461897 GAB2Q9UQC2 676 aa10.25□□□□□ -0.77
COL4A6-204ENST00000461897 PKDREJQ9NTG1 2253 aa10.25□□□□□ -0.77
COL4A6-204ENST00000461897 IGHV3OR15-7A0A075B7D8 119 aa10.25□□□□□ -0.77
COL4A6-204ENST00000461897 LINC00473A8K010 186 aa10.25□□□□□ -0.77
COL4A6-204ENST00000461897 C17orf100A8MU93 164 aa10.25□□□□□ -0.77
COL4A6-204ENST00000461897 TSTD3H0UI37 97 aa10.25□□□□□ -0.77
COL4A6-204ENST00000461897 C15orf65H3BRN8 121 aa10.25□□□□□ -0.77
COL4A6-204ENST00000461897 PDE6DO43924 150 aa10.25□□□□□ -0.77
COL4A6-204ENST00000461897 PAGE4O60829 102 aa10.25□□□□□ -0.77
COL4A6-204ENST00000461897 RD3LP0DJH9 198 aa10.25□□□□□ -0.77
COL4A6-204ENST00000461897 TNFSF4P23510 183 aa10.25□□□□□ -0.77
COL4A6-204ENST00000461897 NPPCP23582 126 aa10.25□□□□□ -0.77
COL4A6-204ENST00000461897 PRDX2P32119 198 aa10.25□□□□□ -0.77
COL4A6-204ENST00000461897 CR1LQ2VPA4 569 aa10.25□□□□□ -0.77
COL4A6-204ENST00000461897 FAM201AQ5SY85 155 aa10.25□□□□□ -0.77
COL4A6-204ENST00000461897 ZCCHC24Q8N2G6 241 aaKnown RBP10.25□□□□□ -0.77
COL4A6-204ENST00000461897 OR2T10Q8NGZ9 312 aa10.25□□□□□ -0.77
COL4A6-204ENST00000461897 Q8TCH9 128 aa10.25□□□□□ -0.77
COL4A6-204ENST00000461897 MRGPRDQ8TDS7 321 aa10.25□□□□□ -0.77
COL4A6-204ENST00000461897 OR6C3Q9NZP0 311 aa10.25□□□□□ -0.77
COL4A6-204ENST00000461897 DSCAMO60469 2012 aa10.25□□□□□ -0.77
COL4A6-204ENST00000461897 HCFC1P51610 2035 aa10.25□□□□□ -0.77
COL4A6-204ENST00000461897 DYSFO75923 2080 aa10.25□□□□□ -0.77
COL4A6-204ENST00000461897 MARCH11A6NNE9 402 aa10.24□□□□□ -0.77
COL4A6-204ENST00000461897 RBFOX2O43251 390 aaKnown RBP eCLIP10.24□□□□□ -0.77
COL4A6-204ENST00000461897 PLAUP00749 431 aa10.24□□□□□ -0.77
COL4A6-204ENST00000461897 GCGP01275 180 aa10.24□□□□□ -0.77
COL4A6-204ENST00000461897 CD3EP07766 207 aa10.24□□□□□ -0.77
COL4A6-204ENST00000461897 DDTP30046 118 aa10.24□□□□□ -0.77
COL4A6-204ENST00000461897 GABRA2P47869 451 aa10.24□□□□□ -0.77
COL4A6-204ENST00000461897 UQCRFS1P47985 274 aa10.24□□□□□ -0.77
COL4A6-204ENST00000461897 CCL8P80075 99 aa10.24□□□□□ -0.77
COL4A6-204ENST00000461897 TLE1Q04724 770 aa10.24□□□□□ -0.77
COL4A6-204ENST00000461897 FAM53AQ6NSI3 398 aaPredicted RBP10.24□□□□□ -0.77
COL4A6-204ENST00000461897 ZNF600Q6ZNG1 722 aa10.24□□□□□ -0.77
COL4A6-204ENST00000461897 OR13A1Q8NGR1 328 aa10.24□□□□□ -0.77
COL4A6-204ENST00000461897 PCGF1Q9BSM1 259 aa10.24□□□□□ -0.77
COL4A6-204ENST00000461897 KCNIP2Q9NS61 270 aa10.24□□□□□ -0.77
COL4A6-204ENST00000461897 IGSF10Q6WRI0 2623 aa10.24□□□□□ -0.77
COL4A6-204ENST00000461897 CFAP46Q8IYW2 2715 aa10.24□□□□□ -0.77
COL4A6-204ENST00000461897 RAI1Q7Z5J4 1906 aaPredicted RBP10.24□□□□□ -0.77
COL4A6-204ENST00000461897 C11orf94C9JXX5 98 aa10.23□□□□□ -0.77
COL4A6-204ENST00000461897 F6UZH7 168 aa10.23□□□□□ -0.77
COL4A6-204ENST00000461897 HMGB3O15347 200 aaKnown RBP10.23□□□□□ -0.77
COL4A6-204ENST00000461897 SPINT2O43291 252 aa10.23□□□□□ -0.77
COL4A6-204ENST00000461897 GZMBP10144 247 aa10.23□□□□□ -0.77
COL4A6-204ENST00000461897 CD1BP29016 333 aa10.23□□□□□ -0.77
COL4A6-204ENST00000461897 DUTP33316 252 aaKnown RBP10.23□□□□□ -0.77
COL4A6-204ENST00000461897 SPCS3P61009 180 aa10.23□□□□□ -0.77
COL4A6-204ENST00000461897 BTNL3Q6UXE8 466 aa10.23□□□□□ -0.77
COL4A6-204ENST00000461897 TMEM144Q7Z5S9 345 aa10.23□□□□□ -0.77
COL4A6-204ENST00000461897 TPRX1Q8N7U7 411 aa10.23□□□□□ -0.77
COL4A6-204ENST00000461897 FAM222BQ8WU58 562 aa10.23□□□□□ -0.77
COL4A6-204ENST00000461897 R3HDM4Q96D70 268 aa10.23□□□□□ -0.77
COL4A6-204ENST00000461897 ELOVL1Q9BW60 279 aa10.23□□□□□ -0.77
COL4A6-204ENST00000461897 DCAF16Q9NXF7 216 aa10.23□□□□□ -0.77
COL4A6-204ENST00000461897 RNF7Q9UBF6 113 aa10.23□□□□□ -0.77
COL4A6-204ENST00000461897 USP24Q9UPU5 2620 aa10.23□□□□□ -0.77
COL4A6-204ENST00000461897 XKRY2A2RUG3 117 aa10.23□□□□□ -0.77
COL4A6-204ENST00000461897 PRSS46E5RG02 174 aa10.23□□□□□ -0.77
COL4A6-204ENST00000461897 HPRT1P00492 218 aa10.23□□□□□ -0.77
COL4A6-204ENST00000461897 OPRK1P41145 380 aa10.23□□□□□ -0.77
COL4A6-204ENST00000461897 RPP30P78346 268 aaKnown RBP10.23□□□□□ -0.77
COL4A6-204ENST00000461897 KCNIP4Q6PIL6 250 aa10.23□□□□□ -0.77
COL4A6-204ENST00000461897 LINC01551Q86U37 167 aa10.23□□□□□ -0.77
COL4A6-204ENST00000461897 QTRT1Q9BXR0 403 aaKnown RBP10.23□□□□□ -0.77
COL4A6-204ENST00000461897 LRBAP50851 2863 aa10.23□□□□□ -0.77
COL4A6-204ENST00000461897 ARFGEF3Q5TH69 2177 aa10.22□□□□□ -0.77
COL4A6-204ENST00000461897 DEFB108AA8MXU0 73 aa10.22□□□□□ -0.77
COL4A6-204ENST00000461897 OR9G9P0C7N8 305 aa10.22□□□□□ -0.77
COL4A6-204ENST00000461897 GNLYP22749 145 aa10.22□□□□□ -0.77
COL4A6-204ENST00000461897 LOXP28300 417 aaPredicted RBP10.22□□□□□ -0.77
COL4A6-204ENST00000461897 SSTR5P35346 364 aa10.22□□□□□ -0.77
COL4A6-204ENST00000461897 VDAC2P45880 294 aaPredicted RBP10.22□□□□□ -0.77
COL4A6-204ENST00000461897 GNB1P62873 340 aa10.22□□□□□ -0.77
COL4A6-204ENST00000461897 FOXL1Q12952 345 aa10.22□□□□□ -0.77
COL4A6-204ENST00000461897 Q3ZCU0 254 aa10.22□□□□□ -0.77
COL4A6-204ENST00000461897 LBHQ53QV2 105 aaPredicted RBP10.22□□□□□ -0.77
COL4A6-204ENST00000461897 STUMQ69YW2 141 aa10.22□□□□□ -0.77
COL4A6-204ENST00000461897 NECAP1Q8NC96 275 aa10.22□□□□□ -0.77
COL4A6-204ENST00000461897 JPT1Q9UK76 154 aa10.22□□□□□ -0.77
COL4A6-204ENST00000461897 PSG11Q9UQ72 335 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 74.3 ms