RNA–Protein interactions for RNA: ENST00000461577.5

TRAPPC12-213, Transcript of trafficking protein particle complex 12, humanhuman

TSL 2

Gene TRAPPC12, Length 677 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-213ENST00000461577 PI3P19957 117 aa8.21□□□□□ -1.1
TRAPPC12-213ENST00000461577 PTBP1P26599 531 aaKnown RBP eCLIP8.21□□□□□ -1.1
TRAPPC12-213ENST00000461577 G6PCP35575 357 aa8.21□□□□□ -1.1
TRAPPC12-213ENST00000461577 BEAN1Q3B7T3 259 aa8.21□□□□□ -1.1
TRAPPC12-213ENST00000461577 ZNF585BQ52M93 769 aa8.21□□□□□ -1.1
TRAPPC12-213ENST00000461577 SPANXN2Q5MJ10 180 aa8.21□□□□□ -1.1
TRAPPC12-213ENST00000461577 TTC9CQ8N5M4 171 aa8.21□□□□□ -1.1
TRAPPC12-213ENST00000461577 ADAD2Q8NCV1 583 aaKnown RBP8.21□□□□□ -1.1
TRAPPC12-213ENST00000461577 OR13C8Q8NGS7 320 aa8.21□□□□□ -1.1
TRAPPC12-213ENST00000461577 MARCH1Q8TCQ1 289 aa8.21□□□□□ -1.1
TRAPPC12-213ENST00000461577 PRRT1Q99946 306 aa8.21□□□□□ -1.1
TRAPPC12-213ENST00000461577 THAP7Q9BT49 309 aaPredicted RBP8.21□□□□□ -1.1
TRAPPC12-213ENST00000461577 COMMD5Q9GZQ3 224 aa8.21□□□□□ -1.1
TRAPPC12-213ENST00000461577 ALX4Q9H161 411 aaPredicted RBP8.21□□□□□ -1.1
TRAPPC12-213ENST00000461577 C14orf166Q9Y224 244 aaKnown RBP8.21□□□□□ -1.1
TRAPPC12-213ENST00000461577 TRAV3A0A0B4J244 114 aa8.2□□□□□ -1.1
TRAPPC12-213ENST00000461577 TEX22C9J3V5 150 aa8.2□□□□□ -1.1
TRAPPC12-213ENST00000461577 LINC01619G3V211 115 aa8.2□□□□□ -1.1
TRAPPC12-213ENST00000461577 BRI3O95415 125 aa8.2□□□□□ -1.1
TRAPPC12-213ENST00000461577 HSPB1P04792 205 aaKnown RBP8.2□□□□□ -1.1
TRAPPC12-213ENST00000461577 SERPINE2P07093 398 aa8.2□□□□□ -1.1
TRAPPC12-213ENST00000461577 CTSDP07339 412 aaPredicted RBP8.2□□□□□ -1.1
TRAPPC12-213ENST00000461577 IL6RP08887 468 aaPredicted RBP8.2□□□□□ -1.1
TRAPPC12-213ENST00000461577 MYOD1P15172 320 aa8.2□□□□□ -1.1
TRAPPC12-213ENST00000461577 FAUP35544 74 aaKnown RBP8.2□□□□□ -1.1
TRAPPC12-213ENST00000461577 AP3S2P59780 193 aa8.2□□□□□ -1.1
TRAPPC12-213ENST00000461577 FHL3Q13643 280 aa8.2□□□□□ -1.1
TRAPPC12-213ENST00000461577 CCDC190Q86UF4 302 aa8.2□□□□□ -1.1
TRAPPC12-213ENST00000461577 Q8N402 240 aa8.2□□□□□ -1.1
TRAPPC12-213ENST00000461577 OR51S1Q8NGJ8 323 aa8.2□□□□□ -1.1
TRAPPC12-213ENST00000461577 USMG5Q96IX5 58 aa8.2□□□□□ -1.1
TRAPPC12-213ENST00000461577 MCUBQ9NWR8 336 aa8.2□□□□□ -1.1
TRAPPC12-213ENST00000461577 SCP2D1Q9UJQ7 156 aa8.2□□□□□ -1.1
TRAPPC12-213ENST00000461577 ZNF257Q9Y2Q1 563 aa8.2□□□□□ -1.1
TRAPPC12-213ENST00000461577 IGHV4OR15-8A0A075B7B6 117 aa8.19□□□□□ -1.1
TRAPPC12-213ENST00000461577 A0A087WW49 117 aa8.19□□□□□ -1.1
TRAPPC12-213ENST00000461577 C3orf85A0A1B0GTC6 90 aa8.19□□□□□ -1.1
TRAPPC12-213ENST00000461577 FAM223BA6NKX1 122 aa8.19□□□□□ -1.1
TRAPPC12-213ENST00000461577 NPIPB5A8MRT5 1133 aa8.19□□□□□ -1.1
TRAPPC12-213ENST00000461577 E7EUB6 86 aa8.19□□□□□ -1.1
TRAPPC12-213ENST00000461577 H0Y980 276 aa8.19□□□□□ -1.1
TRAPPC12-213ENST00000461577 DHFRP00374 187 aa8.19□□□□□ -1.1
TRAPPC12-213ENST00000461577 PRH1P02810 166 aa8.19□□□□□ -1.1
TRAPPC12-213ENST00000461577 FGF2P09038 288 aa8.19□□□□□ -1.1
TRAPPC12-213ENST00000461577 PSMB6P28072 239 aa8.19□□□□□ -1.1
TRAPPC12-213ENST00000461577 DEFA5Q01523 94 aa8.19□□□□□ -1.1
TRAPPC12-213ENST00000461577 KPRPQ5T749 579 aaPredicted RBP8.19□□□□□ -1.1
TRAPPC12-213ENST00000461577 FOXB2Q5VYV0 432 aa8.19□□□□□ -1.1
TRAPPC12-213ENST00000461577 THOC7Q6I9Y2 204 aaKnown RBP8.19□□□□□ -1.1
TRAPPC12-213ENST00000461577 H2BFWTQ7Z2G1 175 aa8.19□□□□□ -1.1
TRAPPC12-213ENST00000461577 FAM223AQ8IWN6 122 aa8.19□□□□□ -1.1
TRAPPC12-213ENST00000461577 CADM3Q8N126 398 aa8.19□□□□□ -1.1
TRAPPC12-213ENST00000461577 TOMM5Q8N4H5 51 aa8.19□□□□□ -1.1
TRAPPC12-213ENST00000461577 OR6Q1Q8NGQ2 317 aa8.19□□□□□ -1.1
TRAPPC12-213ENST00000461577 OR1L8Q8NGR8 309 aa8.19□□□□□ -1.1
TRAPPC12-213ENST00000461577 SCGB3A2Q96PL1 93 aa8.19□□□□□ -1.1
TRAPPC12-213ENST00000461577 TSC22D3Q99576 134 aa8.19□□□□□ -1.1
TRAPPC12-213ENST00000461577 FKBP11Q9NYL4 201 aa8.19□□□□□ -1.1
TRAPPC12-213ENST00000461577 NSG2Q9Y328 171 aa8.19□□□□□ -1.1
TRAPPC12-213ENST00000461577 OR51B2Q9Y5P1 312 aa8.19□□□□□ -1.1
TRAPPC12-213ENST00000461577 V9GYH0 126 aa8.19□□□□□ -1.1
TRAPPC12-213ENST00000461577 TEX13DA0A0J9YY54 714 aaPredicted RBP8.18□□□□□ -1.1
TRAPPC12-213ENST00000461577 ANKRD34BA5PLL1 514 aa8.18□□□□□ -1.1
TRAPPC12-213ENST00000461577 SEC14L6B5MCN3 397 aa8.18□□□□□ -1.1
TRAPPC12-213ENST00000461577 OR2J3O76001 311 aa8.18□□□□□ -1.1
TRAPPC12-213ENST00000461577 ATG12O94817 140 aa8.18□□□□□ -1.1
TRAPPC12-213ENST00000461577 REG1AP05451 166 aa8.18□□□□□ -1.1
TRAPPC12-213ENST00000461577 TRAPPC2P0DI81 140 aa8.18□□□□□ -1.1
TRAPPC12-213ENST00000461577 TRAPPC2BP0DI82 140 aa8.18□□□□□ -1.1
TRAPPC12-213ENST00000461577 DEFA4P12838 97 aa8.18□□□□□ -1.1
TRAPPC12-213ENST00000461577 AREGP15514 252 aa8.18□□□□□ -1.1
TRAPPC12-213ENST00000461577 INPP1P49441 399 aa8.18□□□□□ -1.1
TRAPPC12-213ENST00000461577 SLURP1P55000 103 aa8.18□□□□□ -1.1
TRAPPC12-213ENST00000461577 OR2B8PP59922 312 aa8.18□□□□□ -1.1
TRAPPC12-213ENST00000461577 RHOGP84095 191 aa8.18□□□□□ -1.1
TRAPPC12-213ENST00000461577 ATP5G2Q06055 141 aa8.18□□□□□ -1.1
TRAPPC12-213ENST00000461577 SURF2Q15527 256 aaPredicted RBP8.18□□□□□ -1.1
TRAPPC12-213ENST00000461577 ZNF79Q15937 498 aa8.18□□□□□ -1.1
TRAPPC12-213ENST00000461577 TRIM16LQ309B1 348 aa8.18□□□□□ -1.1
TRAPPC12-213ENST00000461577 C9orf66Q5T8R8 295 aa8.18□□□□□ -1.1
TRAPPC12-213ENST00000461577 OR4A16Q8NH70 328 aa8.18□□□□□ -1.1
TRAPPC12-213ENST00000461577 DCUN1D4Q92564 292 aa8.18□□□□□ -1.1
TRAPPC12-213ENST00000461577 MRGPRFQ96AM1 343 aa8.18□□□□□ -1.1
TRAPPC12-213ENST00000461577 TP53RKQ96S44 253 aa8.18□□□□□ -1.1
TRAPPC12-213ENST00000461577 SRSF8Q9BRL6 282 aaKnown RBP8.18□□□□□ -1.1
TRAPPC12-213ENST00000461577 HINT2Q9BX68 163 aa8.18□□□□□ -1.1
TRAPPC12-213ENST00000461577 QTRT1Q9BXR0 403 aaKnown RBP8.18□□□□□ -1.1
TRAPPC12-213ENST00000461577 RANGRFQ9HD47 186 aaPredicted RBP8.18□□□□□ -1.1
TRAPPC12-213ENST00000461577 AKIP1Q9NQ31 210 aa8.18□□□□□ -1.1
TRAPPC12-213ENST00000461577 SLC2A8Q9NY64 477 aa8.18□□□□□ -1.1
TRAPPC12-213ENST00000461577 PRNDQ9UKY0 176 aa8.18□□□□□ -1.1
TRAPPC12-213ENST00000461577 TRBV9A0A0B4J1U6 114 aa8.17□□□□□ -1.1
TRAPPC12-213ENST00000461577 TEX50A0A1B0GTY4 177 aa8.17□□□□□ -1.1
TRAPPC12-213ENST00000461577 A0A1B0GW64 132 aa8.17□□□□□ -1.1
TRAPPC12-213ENST00000461577 CGB1A6NKQ9 187 aa8.17□□□□□ -1.1
TRAPPC12-213ENST00000461577 OVOL1O14753 267 aa8.17□□□□□ -1.1
TRAPPC12-213ENST00000461577 CYB5BO43169 146 aa8.17□□□□□ -1.1
TRAPPC12-213ENST00000461577 RBMXL2O75526 392 aaKnown RBP8.17□□□□□ -1.1
TRAPPC12-213ENST00000461577 B3GALNT1O75752 331 aa8.17□□□□□ -1.1
TRAPPC12-213ENST00000461577 IGKV1-39P01597 117 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms