RNA–Protein interactions for RNA: ENST00000460048.1

SHANK2-213, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5

Gene SHANK2, Length 736 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-213ENST00000460048 HRASLSQ9HDD0 168 aa12.59□□□□□ -0.39
SHANK2-213ENST00000460048 TMEM140Q9NV12 185 aa12.59□□□□□ -0.39
SHANK2-213ENST00000460048 DMRT1Q9Y5R6 373 aa12.59□□□□□ -0.39
SHANK2-213ENST00000460048 DPPA5A6NC42 116 aa12.58□□□□□ -0.4
SHANK2-213ENST00000460048 FAM25AB3EWG3 89 aa12.58□□□□□ -0.4
SHANK2-213ENST00000460048 FAM25CB3EWG5 89 aa12.58□□□□□ -0.4
SHANK2-213ENST00000460048 FAM25GB3EWG6 89 aa12.58□□□□□ -0.4
SHANK2-213ENST00000460048 BMPR1BO00238 502 aa12.58□□□□□ -0.4
SHANK2-213ENST00000460048 OR2B8PP59922 312 aa12.58□□□□□ -0.4
SHANK2-213ENST00000460048 RPEL1Q2QD12 228 aa12.58□□□□□ -0.4
SHANK2-213ENST00000460048 C15orf32Q32M92 178 aa12.58□□□□□ -0.4
SHANK2-213ENST00000460048 ZNF585BQ52M93 769 aa12.58□□□□□ -0.4
SHANK2-213ENST00000460048 HAPLN4Q86UW8 402 aa12.58□□□□□ -0.4
SHANK2-213ENST00000460048 DGCR14Q96DF8 476 aaKnown RBP12.58□□□□□ -0.4
SHANK2-213ENST00000460048 SIGLEC8Q9NYZ4 499 aa12.58□□□□□ -0.4
SHANK2-213ENST00000460048 SMAD5-AS1Q9Y6J3 95 aa12.58□□□□□ -0.4
SHANK2-213ENST00000460048 TPPPO94811 219 aa12.57□□□□□ -0.4
SHANK2-213ENST00000460048 NHLRC4P0CG21 123 aaPredicted RBP12.57□□□□□ -0.4
SHANK2-213ENST00000460048 TSPAN5P62079 268 aa12.57□□□□□ -0.4
SHANK2-213ENST00000460048 TATDN3Q17R31 274 aa12.57□□□□□ -0.4
SHANK2-213ENST00000460048 FAM209BQ5JX69 171 aa12.57□□□□□ -0.4
SHANK2-213ENST00000460048 LPCAT3Q6P1A2 487 aa12.57□□□□□ -0.4
SHANK2-213ENST00000460048 CMTM1Q8IZ96 169 aa12.57□□□□□ -0.4
SHANK2-213ENST00000460048 CADM3Q8N126 398 aa12.57□□□□□ -0.4
SHANK2-213ENST00000460048 DMBX1Q8NFW5 382 aa12.57□□□□□ -0.4
SHANK2-213ENST00000460048 RSRP1Q9BUV0 290 aa12.57□□□□□ -0.4
SHANK2-213ENST00000460048 EXTL2Q9UBQ6 330 aa12.57□□□□□ -0.4
SHANK2-213ENST00000460048 FBXL7Q9UJT9 491 aa12.57□□□□□ -0.4
SHANK2-213ENST00000460048 IGLC7A0M8Q6 106 aa12.56□□□□□ -0.4
SHANK2-213ENST00000460048 MARCH11A6NNE9 402 aa12.56□□□□□ -0.4
SHANK2-213ENST00000460048 NDUFB8O95169 186 aa12.56□□□□□ -0.4
SHANK2-213ENST00000460048 CSN3P07498 182 aa12.56□□□□□ -0.4
SHANK2-213ENST00000460048 LPAR6P43657 344 aa12.56□□□□□ -0.4
SHANK2-213ENST00000460048 UCP3P55916 312 aa12.56□□□□□ -0.4
SHANK2-213ENST00000460048 SPCS2Q15005 226 aa12.56□□□□□ -0.4
SHANK2-213ENST00000460048 FCAMRQ8WWV6 532 aa12.56□□□□□ -0.4
SHANK2-213ENST00000460048 SRSF8Q9BRL6 282 aaKnown RBP12.56□□□□□ -0.4
SHANK2-213ENST00000460048 COMMD5Q9GZQ3 224 aa12.56□□□□□ -0.4
SHANK2-213ENST00000460048 MIXL1Q9H2W2 232 aa12.56□□□□□ -0.4
SHANK2-213ENST00000460048 KLK11Q9UBX7 282 aa12.56□□□□□ -0.4
SHANK2-213ENST00000460048 IGLV11-55A0A075B6I3 123 aa12.55□□□□□ -0.4
SHANK2-213ENST00000460048 DHFRP00374 187 aa12.55□□□□□ -0.4
SHANK2-213ENST00000460048 REG1AP05451 166 aa12.55□□□□□ -0.4
SHANK2-213ENST00000460048 RPA2P15927 270 aa12.55□□□□□ -0.4
SHANK2-213ENST00000460048 HIST1H1BP16401 226 aaKnown RBP12.55□□□□□ -0.4
SHANK2-213ENST00000460048 ERVK-16P61578 105 aa12.55□□□□□ -0.4
SHANK2-213ENST00000460048 PHLDA2Q53GA4 152 aa12.55□□□□□ -0.4
SHANK2-213ENST00000460048 OR52I2Q8NH67 350 aa12.55□□□□□ -0.4
SHANK2-213ENST00000460048 CCDC140Q96MF4 163 aa12.55□□□□□ -0.4
SHANK2-213ENST00000460048 ABHD1Q96SE0 405 aa12.55□□□□□ -0.4
SHANK2-213ENST00000460048 FAM212BQ9NTI7 297 aaPredicted RBP12.55□□□□□ -0.4
SHANK2-213ENST00000460048 MTFP1Q9UDX5 166 aa12.55□□□□□ -0.4
SHANK2-213ENST00000460048 TEX50A0A1B0GTY4 177 aa12.54□□□□□ -0.4
SHANK2-213ENST00000460048 PPP5D1E7EU14 171 aa12.54□□□□□ -0.4
SHANK2-213ENST00000460048 M0QYG6 137 aa12.54□□□□□ -0.4
SHANK2-213ENST00000460048 MECP2P51608 486 aaKnown RBP12.54□□□□□ -0.4
SHANK2-213ENST00000460048 RNASE12Q5GAN4 147 aaKnown RBP12.54□□□□□ -0.4
SHANK2-213ENST00000460048 THOC7Q6I9Y2 204 aaKnown RBP12.54□□□□□ -0.4
SHANK2-213ENST00000460048 SLC38A6Q8IZM9 456 aa12.54□□□□□ -0.4
SHANK2-213ENST00000460048 Q8N1Y9 231 aa12.54□□□□□ -0.4
SHANK2-213ENST00000460048 QTRT1Q9BXR0 403 aaKnown RBP12.54□□□□□ -0.4
SHANK2-213ENST00000460048 PEMTQ9UBM1 199 aa12.54□□□□□ -0.4
SHANK2-213ENST00000460048 KRASP01116 189 aa12.53□□□□□ -0.4
SHANK2-213ENST00000460048 DEFA4P12838 97 aa12.53□□□□□ -0.4
SHANK2-213ENST00000460048 PTBP1P26599 531 aaKnown RBP eCLIP12.53□□□□□ -0.41e-6■■■□□ 14.8
SHANK2-213ENST00000460048 G6PCP35575 357 aa12.53□□□□□ -0.4
SHANK2-213ENST00000460048 TBC1D26Q86UD7 250 aa12.53□□□□□ -0.4
SHANK2-213ENST00000460048 LHFPL1Q86WI0 220 aa12.53□□□□□ -0.4
SHANK2-213ENST00000460048 CLVS1Q8IUQ0 354 aaPredicted RBP12.53□□□□□ -0.4
SHANK2-213ENST00000460048 OR10W1Q8NGF6 305 aa12.53□□□□□ -0.4
SHANK2-213ENST00000460048 C15orf40Q8WUR7 153 aa12.53□□□□□ -0.4
SHANK2-213ENST00000460048 ASCL2Q99929 193 aa12.53□□□□□ -0.4
SHANK2-213ENST00000460048 NDUFA4L2Q9NRX3 87 aa12.53□□□□□ -0.4
SHANK2-213ENST00000460048 S4R3C0 116 aa12.53□□□□□ -0.4
SHANK2-213ENST00000460048 H0Y980 276 aa12.52□□□□□ -0.41
SHANK2-213ENST00000460048 CTDSP2O14595 271 aa12.52□□□□□ -0.41
SHANK2-213ENST00000460048 GGCTO75223 188 aaKnown RBP12.52□□□□□ -0.41
SHANK2-213ENST00000460048 IGHV3-23P01764 117 aa12.52□□□□□ -0.41
SHANK2-213ENST00000460048 CD3DP04234 171 aa12.52□□□□□ -0.41
SHANK2-213ENST00000460048 TRAPPC2P0DI81 140 aa12.52□□□□□ -0.41
SHANK2-213ENST00000460048 TRAPPC2BP0DI82 140 aa12.52□□□□□ -0.41
SHANK2-213ENST00000460048 S100GP29377 79 aa12.52□□□□□ -0.41
SHANK2-213ENST00000460048 TMBIM6P55061 237 aa12.52□□□□□ -0.41
SHANK2-213ENST00000460048 RNASE10Q5GAN6 216 aaKnown RBP12.52□□□□□ -0.41
SHANK2-213ENST00000460048 CLEC19AQ6UXS0 136 aa12.52□□□□□ -0.41
SHANK2-213ENST00000460048 ADAMTSL5Q6ZMM2 481 aa12.52□□□□□ -0.41
SHANK2-213ENST00000460048 LAX1Q8IWV1 398 aa12.52□□□□□ -0.41
SHANK2-213ENST00000460048 ARRDC1Q8N5I2 433 aa12.52□□□□□ -0.41
SHANK2-213ENST00000460048 OR1L8Q8NGR8 309 aa12.52□□□□□ -0.41
SHANK2-213ENST00000460048 DYNC2LI1Q8TCX1 351 aa12.52□□□□□ -0.41
SHANK2-213ENST00000460048 RAB2BQ8WUD1 216 aa12.52□□□□□ -0.41
SHANK2-213ENST00000460048 EEF1AKMT3Q96AZ1 226 aa12.52□□□□□ -0.41
SHANK2-213ENST00000460048 BCL7BQ9BQE9 202 aa12.52□□□□□ -0.41
SHANK2-213ENST00000460048 NSG2Q9Y328 171 aa12.52□□□□□ -0.41
SHANK2-213ENST00000460048 KMT2CQ8NEZ4 4911 aaKnown RBP12.51□□□□□ -0.41
SHANK2-213ENST00000460048 MFSD2BA6NFX1 497 aa12.51□□□□□ -0.41
SHANK2-213ENST00000460048 LGALS9O00182 355 aa12.51□□□□□ -0.41
SHANK2-213ENST00000460048 OR2C1O95371 312 aa12.51□□□□□ -0.41
SHANK2-213ENST00000460048 IGKV1-39P01597 117 aa12.51□□□□□ -0.41
SHANK2-213ENST00000460048 HLA-AP01891 365 aaKnown RBP12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms