RNA–Protein interactions for RNA: ENST00000459775.5

USP39-210, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2

Gene USP39, Length 2,148 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-210ENST00000459775 OR4S2Q8NH73 311 aa8.43□□□□□ -1.06
USP39-210ENST00000459775 CABLES2Q9BTV7 478 aa8.43□□□□□ -1.06
USP39-210ENST00000459775 C20orf24Q9BUV8 137 aa8.43□□□□□ -1.06
USP39-210ENST00000459775 REG4Q9BYZ8 158 aa8.43□□□□□ -1.06
USP39-210ENST00000459775 FXYD6Q9H0Q3 95 aa8.43□□□□□ -1.06
USP39-210ENST00000459775 C20orf85Q9H1P6 137 aa8.43□□□□□ -1.06
USP39-210ENST00000459775 SRD5A3Q9H8P0 318 aa8.43□□□□□ -1.06
USP39-210ENST00000459775 BEX4Q9NWD9 120 aaPredicted RBP8.43□□□□□ -1.06
USP39-210ENST00000459775 GNG12Q9UBI6 72 aa8.43□□□□□ -1.06
USP39-210ENST00000459775 LINC00312Q9Y6C7 94 aa8.43□□□□□ -1.06
USP39-210ENST00000459775 ZFHX3Q15911 3703 aa8.43□□□□□ -1.06
USP39-210ENST00000459775 NPIPB11E5RHQ5 1161 aa8.42□□□□□ -1.06
USP39-210ENST00000459775 SPINT2O43291 252 aa8.42□□□□□ -1.06
USP39-210ENST00000459775 RGS11O94810 467 aa8.42□□□□□ -1.06
USP39-210ENST00000459775 NDUFB6O95139 128 aa8.42□□□□□ -1.06
USP39-210ENST00000459775 IFNA7P01567 189 aa8.42□□□□□ -1.06
USP39-210ENST00000459775 LGALS7P47929 136 aa8.42□□□□□ -1.06
USP39-210ENST00000459775 MEF2CQ06413 473 aaPredicted RBP8.42□□□□□ -1.06
USP39-210ENST00000459775 RBMS2Q15434 407 aaKnown RBP8.42□□□□□ -1.06
USP39-210ENST00000459775 TNXAQ16473 311 aa8.42□□□□□ -1.06
USP39-210ENST00000459775 C1orf229Q6ZS94 237 aaPredicted RBP8.42□□□□□ -1.06
USP39-210ENST00000459775 H1FOOQ8IZA3 346 aaPredicted RBP8.42□□□□□ -1.06
USP39-210ENST00000459775 CIARTQ8N365 385 aaPredicted RBP8.42□□□□□ -1.06
USP39-210ENST00000459775 SECTM1Q8WVN6 248 aa8.42□□□□□ -1.06
USP39-210ENST00000459775 ABHD14BQ96IU4 210 aa8.42□□□□□ -1.06
USP39-210ENST00000459775 SUCNR1Q9BXA5 334 aa8.42□□□□□ -1.06
USP39-210ENST00000459775 PRR13Q9NZ81 148 aa8.42□□□□□ -1.06
USP39-210ENST00000459775 A0A096LNT2 108 aa8.42□□□□□ -1.06
USP39-210ENST00000459775 A0A1W2PRD5 423 aa8.42□□□□□ -1.06
USP39-210ENST00000459775 A0A1W2PRF3 423 aa8.42□□□□□ -1.06
USP39-210ENST00000459775 A0A1W2PRM7 423 aa8.42□□□□□ -1.06
USP39-210ENST00000459775 NAP1L6A6NFF2 107 aa8.42□□□□□ -1.06
USP39-210ENST00000459775 H0Y980 276 aa8.42□□□□□ -1.06
USP39-210ENST00000459775 HSD17B6O14756 317 aa8.42□□□□□ -1.06
USP39-210ENST00000459775 TNFSF12O43508 249 aa8.42□□□□□ -1.06
USP39-210ENST00000459775 VSIG10L2P0DP72 767 aa8.42□□□□□ -1.06
USP39-210ENST00000459775 TBPP20226 339 aa8.42□□□□□ -1.06
USP39-210ENST00000459775 ZBTB25P24278 435 aa8.42□□□□□ -1.06
USP39-210ENST00000459775 RRAS2P62070 204 aaPredicted RBP8.42□□□□□ -1.06
USP39-210ENST00000459775 TATDN3Q17R31 274 aa8.42□□□□□ -1.06
USP39-210ENST00000459775 PHLDA2Q53GA4 152 aa8.42□□□□□ -1.06
USP39-210ENST00000459775 SAMD13Q5VXD3 122 aa8.42□□□□□ -1.06
USP39-210ENST00000459775 Q8N7P7 452 aa8.42□□□□□ -1.06
USP39-210ENST00000459775 OR9G4Q8NGQ1 327 aa8.42□□□□□ -1.06
USP39-210ENST00000459775 C5orf66Q9H5L9 145 aa8.42□□□□□ -1.06
USP39-210ENST00000459775 CCL28Q9NRJ3 127 aa8.42□□□□□ -1.06
USP39-210ENST00000459775 IDI2-AS1Q9NZ38 188 aa8.42□□□□□ -1.06
USP39-210ENST00000459775 ZFP30Q9Y2G7 519 aa8.42□□□□□ -1.06
USP39-210ENST00000459775 RBM7Q9Y580 266 aaKnown RBP8.42□□□□□ -1.06
USP39-210ENST00000459775 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP8.41□□□□□ -1.06
USP39-210ENST00000459775 C20orf202A1L168 122 aa8.41□□□□□ -1.06
USP39-210ENST00000459775 INMT-MINDY4F8WBC2 141 aa8.41□□□□□ -1.06
USP39-210ENST00000459775 F2RL2O00254 374 aa8.41□□□□□ -1.06
USP39-210ENST00000459775 ARG1P05089 322 aa8.41□□□□□ -1.06
USP39-210ENST00000459775 PGAM2P15259 253 aa8.41□□□□□ -1.06
USP39-210ENST00000459775 AKR1C4P17516 323 aa8.41□□□□□ -1.06
USP39-210ENST00000459775 USF1P22415 310 aaPredicted RBP8.41□□□□□ -1.06
USP39-210ENST00000459775 FPR2P25090 351 aa8.41□□□□□ -1.06
USP39-210ENST00000459775 RAB5CP51148 216 aa8.41□□□□□ -1.06
USP39-210ENST00000459775 UBE2MP61081 183 aaKnown RBP8.41□□□□□ -1.06
USP39-210ENST00000459775 PAX2Q02962 417 aa8.41□□□□□ -1.06
USP39-210ENST00000459775 KLRD1Q13241 179 aa8.41□□□□□ -1.06
USP39-210ENST00000459775 MORN2Q502X0 79 aa8.41□□□□□ -1.06
USP39-210ENST00000459775 PNKDQ8N490 385 aa8.41□□□□□ -1.06
USP39-210ENST00000459775 LY6G5BQ8NDX9 201 aa8.41□□□□□ -1.06
USP39-210ENST00000459775 RAB40CQ96S21 281 aa8.41□□□□□ -1.06
USP39-210ENST00000459775 RTBDNQ9BSG5 229 aaPredicted RBP8.41□□□□□ -1.06
USP39-210ENST00000459775 DSCAML1Q8TD84 2053 aa8.41□□□□□ -1.06
USP39-210ENST00000459775 SMCO3A2RU48 225 aa8.41□□□□□ -1.06
USP39-210ENST00000459775 IGLV2-14P01704 120 aa8.41□□□□□ -1.06
USP39-210ENST00000459775 PVALBP20472 110 aaPredicted RBP8.41□□□□□ -1.06
USP39-210ENST00000459775 COX7A1P24310 79 aa8.41□□□□□ -1.06
USP39-210ENST00000459775 CT45A1Q5HYN5 189 aa8.41□□□□□ -1.06
USP39-210ENST00000459775 ZNF818PQ6ZRF7 136 aa8.41□□□□□ -1.06
USP39-210ENST00000459775 CENPVQ7Z7K6 275 aaPredicted RBP8.41□□□□□ -1.06
USP39-210ENST00000459775 BAP18Q8IXM2 172 aa8.41□□□□□ -1.06
USP39-210ENST00000459775 LGI3Q8N145 548 aa8.41□□□□□ -1.06
USP39-210ENST00000459775 CT45A3Q8NHU0 189 aa8.41□□□□□ -1.06
USP39-210ENST00000459775 MRAPQ8TCY5 172 aa8.41□□□□□ -1.06
USP39-210ENST00000459775 TMEM230Q96A57 120 aa8.41□□□□□ -1.06
USP39-210ENST00000459775 MOB3AQ96BX8 217 aa8.41□□□□□ -1.06
USP39-210ENST00000459775 C1orf159Q96HA4 380 aa8.41□□□□□ -1.06
USP39-210ENST00000459775 MARVELD1Q9BSK0 173 aa8.41□□□□□ -1.06
USP39-210ENST00000459775 MAP1LC3CQ9BXW4 147 aa8.41□□□□□ -1.06
USP39-210ENST00000459775 RAB9BQ9NP90 201 aa8.41□□□□□ -1.06
USP39-210ENST00000459775 OR2W1Q9Y3N9 320 aa8.41□□□□□ -1.06
USP39-210ENST00000459775 C1orf196B1AJZ1 125 aa8.4□□□□□ -1.06
USP39-210ENST00000459775 RS1O15537 224 aa8.4□□□□□ -1.06
USP39-210ENST00000459775 IGHV1-8P0DP01 117 aa8.4□□□□□ -1.06
USP39-210ENST00000459775 FCGR2BP31994 310 aaPredicted RBP8.4□□□□□ -1.06
USP39-210ENST00000459775 HERV-K104P61576 105 aa8.4□□□□□ -1.06
USP39-210ENST00000459775 CT83Q5H943 113 aa8.4□□□□□ -1.06
USP39-210ENST00000459775 HEPN1Q6WQI6 88 aa8.4□□□□□ -1.06
USP39-210ENST00000459775 KCNS2Q9ULS6 477 aa8.4□□□□□ -1.06
USP39-210ENST00000459775 GPR132Q9UNW8 380 aa8.4□□□□□ -1.06
USP39-210ENST00000459775 MTORP42345 2549 aa8.4□□□□□ -1.07
USP39-210ENST00000459775 DOCK11Q5JSL3 2073 aa8.39□□□□□ -1.07
USP39-210ENST00000459775 FAM74A7A6NL05 159 aa8.39□□□□□ -1.07
USP39-210ENST00000459775 FAM90A9PA6NNJ1 464 aa8.39□□□□□ -1.07
USP39-210ENST00000459775 C17orf98A8MV24 154 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms