RNA–Protein interactions for RNA: ENST00000458610.6

CD28-203, Transcript of CD28 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD28, Length 705 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD28-203ENST00000458610 B3GALNT1O75752 331 aa12.53□□□□□ -0.4
CD28-203ENST00000458610 KRASP01116 189 aa12.53□□□□□ -0.4
CD28-203ENST00000458610 HSPB1P04792 205 aaKnown RBP12.53□□□□□ -0.4
CD28-203ENST00000458610 IL6RP08887 468 aaPredicted RBP12.53□□□□□ -0.4
CD28-203ENST00000458610 ZNF735P0CB33 412 aa12.53□□□□□ -0.4
CD28-203ENST00000458610 RPA2P15927 270 aa12.53□□□□□ -0.4
CD28-203ENST00000458610 FAUP35544 74 aaKnown RBP12.53□□□□□ -0.4
CD28-203ENST00000458610 AP3S2P59780 193 aa12.53□□□□□ -0.4
CD28-203ENST00000458610 FHL3Q13643 280 aa12.53□□□□□ -0.4
CD28-203ENST00000458610 SURF2Q15527 256 aaPredicted RBP12.53□□□□□ -0.4
CD28-203ENST00000458610 PYDC2Q56P42 97 aa12.53□□□□□ -0.4
CD28-203ENST00000458610 FAM209BQ5JX69 171 aa12.53□□□□□ -0.4
CD28-203ENST00000458610 SPANXN2Q5MJ10 180 aa12.53□□□□□ -0.4
CD28-203ENST00000458610 THOC7Q6I9Y2 204 aaKnown RBP12.53□□□□□ -0.4
CD28-203ENST00000458610 ADAD2Q8NCV1 583 aaKnown RBP12.53□□□□□ -0.4
CD28-203ENST00000458610 CASTOR1Q8WTX7 329 aa12.53□□□□□ -0.4
CD28-203ENST00000458610 SCGB3A2Q96PL1 93 aa12.53□□□□□ -0.4
CD28-203ENST00000458610 SRSF8Q9BRL6 282 aaKnown RBP12.53□□□□□ -0.4
CD28-203ENST00000458610 RANGRFQ9HD47 186 aaPredicted RBP12.53□□□□□ -0.4
CD28-203ENST00000458610 SCP2D1Q9UJQ7 156 aa12.53□□□□□ -0.4
CD28-203ENST00000458610 C14orf166Q9Y224 244 aaKnown RBP12.53□□□□□ -0.4
CD28-203ENST00000458610 PKD1L1Q8TDX9 2849 aa12.52□□□□□ -0.4
CD28-203ENST00000458610 ANKRD20A5PA0PJZ0 165 aa12.52□□□□□ -0.41
CD28-203ENST00000458610 FAM223BA6NKX1 122 aa12.52□□□□□ -0.41
CD28-203ENST00000458610 CTSDP07339 412 aaPredicted RBP12.52□□□□□ -0.41
CD28-203ENST00000458610 APELAP0DMC3 54 aa12.52□□□□□ -0.41
CD28-203ENST00000458610 PIGPP57054 158 aa12.52□□□□□ -0.41
CD28-203ENST00000458610 ZNF585BQ52M93 769 aa12.52□□□□□ -0.41
CD28-203ENST00000458610 HSD17B13Q7Z5P4 300 aaPredicted RBP12.52□□□□□ -0.41
CD28-203ENST00000458610 FAM223AQ8IWN6 122 aa12.52□□□□□ -0.41
CD28-203ENST00000458610 OR4D10Q8NGI6 311 aa12.52□□□□□ -0.41
CD28-203ENST00000458610 NPIPB5A8MRT5 1133 aa12.51□□□□□ -0.41
CD28-203ENST00000458610 CYB5BO43169 146 aa12.51□□□□□ -0.41
CD28-203ENST00000458610 IGHV3-11P01762 117 aa12.51□□□□□ -0.41
CD28-203ENST00000458610 HIST1H1BP16401 226 aaKnown RBP12.51□□□□□ -0.41
CD28-203ENST00000458610 PPP5CP53041 499 aa12.51□□□□□ -0.41
CD28-203ENST00000458610 ATP5G2Q06055 141 aa12.51□□□□□ -0.41
CD28-203ENST00000458610 C10orf55Q5SWW7 151 aa12.51□□□□□ -0.41
CD28-203ENST00000458610 C9orf66Q5T8R8 295 aa12.51□□□□□ -0.41
CD28-203ENST00000458610 NECAP1Q8NC96 275 aa12.51□□□□□ -0.41
CD28-203ENST00000458610 DEDD2Q8WXF8 326 aa12.51□□□□□ -0.41
CD28-203ENST00000458610 PRNDQ9UKY0 176 aa12.51□□□□□ -0.41
CD28-203ENST00000458610 C3orf85A0A1B0GTC6 90 aa12.5□□□□□ -0.41
CD28-203ENST00000458610 HMX3A6NHT5 357 aa12.5□□□□□ -0.41
CD28-203ENST00000458610 TEX22C9J3V5 150 aa12.5□□□□□ -0.41
CD28-203ENST00000458610 H0Y980 276 aa12.5□□□□□ -0.41
CD28-203ENST00000458610 TRAPPC2P0DI81 140 aa12.5□□□□□ -0.41
CD28-203ENST00000458610 TRAPPC2BP0DI82 140 aa12.5□□□□□ -0.41
CD28-203ENST00000458610 DEFA4P12838 97 aa12.5□□□□□ -0.41
CD28-203ENST00000458610 ZP3P21754 424 aa12.5□□□□□ -0.41
CD28-203ENST00000458610 PSMB6P28072 239 aa12.5□□□□□ -0.41
CD28-203ENST00000458610 G6PCP35575 357 aa12.5□□□□□ -0.41
CD28-203ENST00000458610 OR2B8PP59922 312 aa12.5□□□□□ -0.41
CD28-203ENST00000458610 H2BFWTQ7Z2G1 175 aa12.5□□□□□ -0.41
CD28-203ENST00000458610 CCDC190Q86UF4 302 aa12.5□□□□□ -0.41
CD28-203ENST00000458610 Q8N402 240 aa12.5□□□□□ -0.41
CD28-203ENST00000458610 OR4C16Q8NGL9 310 aa12.5□□□□□ -0.41
CD28-203ENST00000458610 OR1L8Q8NGR8 309 aa12.5□□□□□ -0.41
CD28-203ENST00000458610 OR13C8Q8NGS7 320 aa12.5□□□□□ -0.41
CD28-203ENST00000458610 MARCH1Q8TCQ1 289 aa12.5□□□□□ -0.41
CD28-203ENST00000458610 TRRAPQ9Y4A5 3859 aa12.5□□□□□ -0.41
CD28-203ENST00000458610 TRAV3A0A0B4J244 114 aa12.49□□□□□ -0.41
CD28-203ENST00000458610 CRYGCP07315 174 aa12.49□□□□□ -0.41
CD28-203ENST00000458610 PI3P19957 117 aa12.49□□□□□ -0.41
CD28-203ENST00000458610 ETV6P41212 452 aa12.49□□□□□ -0.41
CD28-203ENST00000458610 INSL3P51460 131 aa12.49□□□□□ -0.41
CD28-203ENST00000458610 RHOGP84095 191 aa12.49□□□□□ -0.41
CD28-203ENST00000458610 TATDN3Q17R31 274 aa12.49□□□□□ -0.41
CD28-203ENST00000458610 FOXB2Q5VYV0 432 aa12.49□□□□□ -0.41
CD28-203ENST00000458610 TOMM5Q8N4H5 51 aa12.49□□□□□ -0.41
CD28-203ENST00000458610 OR5B3Q8NH48 314 aa12.49□□□□□ -0.41
CD28-203ENST00000458610 QTRT1Q9BXR0 403 aaKnown RBP12.49□□□□□ -0.41
CD28-203ENST00000458610 ALX4Q9H161 411 aaPredicted RBP12.49□□□□□ -0.41
CD28-203ENST00000458610 MCUBQ9NWR8 336 aa12.49□□□□□ -0.41
CD28-203ENST00000458610 SLC2A8Q9NY64 477 aa12.49□□□□□ -0.41
CD28-203ENST00000458610 PEF1Q9UBV8 284 aaKnown RBP12.49□□□□□ -0.41
CD28-203ENST00000458610 NOTCH3Q9UM47 2321 aa12.48□□□□□ -0.41
CD28-203ENST00000458610 IGHV4OR15-8A0A075B7B6 117 aa12.48□□□□□ -0.41
CD28-203ENST00000458610 A0A087WW49 117 aa12.48□□□□□ -0.41
CD28-203ENST00000458610 TRBV9A0A0B4J1U6 114 aa12.48□□□□□ -0.41
CD28-203ENST00000458610 TEX13DA0A0J9YY54 714 aaPredicted RBP12.48□□□□□ -0.41
CD28-203ENST00000458610 TEX50A0A1B0GTY4 177 aa12.48□□□□□ -0.41
CD28-203ENST00000458610 SEC14L6B5MCN3 397 aa12.48□□□□□ -0.41
CD28-203ENST00000458610 OVOL1O14753 267 aa12.48□□□□□ -0.41
CD28-203ENST00000458610 ZNF343Q6P1L6 599 aa12.48□□□□□ -0.41
CD28-203ENST00000458610 OR51S1Q8NGJ8 323 aa12.48□□□□□ -0.41
CD28-203ENST00000458610 OR6Q1Q8NGQ2 317 aa12.48□□□□□ -0.41
CD28-203ENST00000458610 OR4A16Q8NH70 328 aa12.48□□□□□ -0.41
CD28-203ENST00000458610 DCUN1D4Q92564 292 aa12.48□□□□□ -0.41
CD28-203ENST00000458610 SEC22AQ96IW7 307 aa12.48□□□□□ -0.41
CD28-203ENST00000458610 TMEM56Q96MV1 263 aa12.48□□□□□ -0.41
CD28-203ENST00000458610 AKIP1Q9NQ31 210 aa12.48□□□□□ -0.41
CD28-203ENST00000458610 THYN1Q9P016 225 aa12.48□□□□□ -0.41
CD28-203ENST00000458610 GPR132Q9UNW8 380 aa12.48□□□□□ -0.41
CD28-203ENST00000458610 KCNIP3Q9Y2W7 256 aa12.48□□□□□ -0.41
CD28-203ENST00000458610 OR51B2Q9Y5P1 312 aa12.48□□□□□ -0.41
CD28-203ENST00000458610 V9GYH0 126 aa12.48□□□□□ -0.41
CD28-203ENST00000458610 VWFP04275 2813 aa12.48□□□□□ -0.41
CD28-203ENST00000458610 TNCP24821 2201 aa12.47□□□□□ -0.41
CD28-203ENST00000458610 E7EUB6 86 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms