RNA–Protein interactions for RNA: ENST00000458268.5

USP39-209, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 751 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-209ENST00000458268 COMMD5Q9GZQ3 224 aa14.41□□□□□ -0.1
USP39-209ENST00000458268 PLEKHA2Q9HB19 425 aa14.41□□□□□ -0.1
USP39-209ENST00000458268 AKIP1Q9NQ31 210 aa14.41□□□□□ -0.1
USP39-209ENST00000458268 COMMD9Q9P000 198 aa14.41□□□□□ -0.1
USP39-209ENST00000458268 NSG2Q9Y328 171 aa14.41□□□□□ -0.1
USP39-209ENST00000458268 MARCH11A6NNE9 402 aa14.4□□□□□ -0.1
USP39-209ENST00000458268 GABARAPH6UMI1 98 aa14.4□□□□□ -0.1
USP39-209ENST00000458268 UPK2O00526 184 aa14.4□□□□□ -0.1
USP39-209ENST00000458268 RBMXL2O75526 392 aaKnown RBP14.4□□□□□ -0.1
USP39-209ENST00000458268 TRBV12-3P01733 135 aa14.4□□□□□ -0.1
USP39-209ENST00000458268 DEFA4P12838 97 aa14.4□□□□□ -0.1
USP39-209ENST00000458268 ZNF45Q02386 682 aa14.4□□□□□ -0.1
USP39-209ENST00000458268 ATP5G2Q06055 141 aa14.4□□□□□ -0.1
USP39-209ENST00000458268 SLC25A42Q86VD7 318 aa14.4□□□□□ -0.1
USP39-209ENST00000458268 OR4A5Q8NH83 315 aa14.4□□□□□ -0.1
USP39-209ENST00000458268 RANGRFQ9HD47 186 aaPredicted RBP14.4□□□□□ -0.1
USP39-209ENST00000458268 S4R3C0 116 aa14.4□□□□□ -0.1
USP39-209ENST00000458268 A0A1B0GW64 132 aa14.39□□□□□ -0.11
USP39-209ENST00000458268 IGHV3-23P01764 117 aa14.39□□□□□ -0.11
USP39-209ENST00000458268 OR2B8PP59922 312 aa14.39□□□□□ -0.11
USP39-209ENST00000458268 EGFEM1PQ0D2K5 195 aa14.39□□□□□ -0.11
USP39-209ENST00000458268 STEAP1BQ6NZ63 245 aa14.39□□□□□ -0.11
USP39-209ENST00000458268 HAPLN4Q86UW8 402 aa14.39□□□□□ -0.11
USP39-209ENST00000458268 TTC9CQ8N5M4 171 aa14.39□□□□□ -0.11
USP39-209ENST00000458268 TMEM229BQ8NBD8 167 aa14.39□□□□□ -0.11
USP39-209ENST00000458268 USMG5Q96IX5 58 aa14.39□□□□□ -0.11
USP39-209ENST00000458268 SLIRPQ9GZT3 109 aaKnown RBP14.39□□□□□ -0.11
USP39-209ENST00000458268 PEF1Q9UBV8 284 aaKnown RBP14.39□□□□□ -0.11
USP39-209ENST00000458268 SNAPC5O75971 98 aa14.38□□□□□ -0.11
USP39-209ENST00000458268 ZNF735P0CB33 412 aa14.38□□□□□ -0.11
USP39-209ENST00000458268 MRPS10P82664 201 aaKnown RBP14.38□□□□□ -0.11
USP39-209ENST00000458268 ARRDC1Q8N5I2 433 aa14.38□□□□□ -0.11
USP39-209ENST00000458268 SMIM4Q8WVI0 70 aa14.38□□□□□ -0.11
USP39-209ENST00000458268 OR4C12Q96R67 309 aa14.38□□□□□ -0.11
USP39-209ENST00000458268 SLC2A9Q9NRM0 540 aa14.38□□□□□ -0.11
USP39-209ENST00000458268 FBXL7Q9UJT9 491 aa14.38□□□□□ -0.11
USP39-209ENST00000458268 ZNF257Q9Y2Q1 563 aa14.38□□□□□ -0.11
USP39-209ENST00000458268 TGP01266 2768 aa14.37□□□□□ -0.11
USP39-209ENST00000458268 FAM223BA6NKX1 122 aa14.37□□□□□ -0.11
USP39-209ENST00000458268 TPPPO94811 219 aa14.37□□□□□ -0.11
USP39-209ENST00000458268 TBPP20226 339 aa14.37□□□□□ -0.11
USP39-209ENST00000458268 ZP3P21754 424 aa14.37□□□□□ -0.11
USP39-209ENST00000458268 PSMB6P28072 239 aa14.37□□□□□ -0.11
USP39-209ENST00000458268 TNFSF8P32971 234 aa14.37□□□□□ -0.11
USP39-209ENST00000458268 MECP2P51608 486 aaKnown RBP14.37□□□□□ -0.11
USP39-209ENST00000458268 UCP3P55916 312 aa14.37□□□□□ -0.11
USP39-209ENST00000458268 RPEL1Q2QD12 228 aa14.37□□□□□ -0.11
USP39-209ENST00000458268 ZNF585BQ52M93 769 aa14.37□□□□□ -0.11
USP39-209ENST00000458268 FAM223AQ8IWN6 122 aa14.37□□□□□ -0.11
USP39-209ENST00000458268 MARCH1Q8TCQ1 289 aa14.37□□□□□ -0.11
USP39-209ENST00000458268 ZMAT5Q9UDW3 170 aaKnown RBP14.37□□□□□ -0.11
USP39-209ENST00000458268 RSL24D1Q9UHA3 163 aaKnown RBP14.37□□□□□ -0.11
USP39-209ENST00000458268 FABP12A6NFH5 140 aa14.36□□□□□ -0.11
USP39-209ENST00000458268 CGB1A6NKQ9 187 aa14.36□□□□□ -0.11
USP39-209ENST00000458268 DHFRP00374 187 aa14.36□□□□□ -0.11
USP39-209ENST00000458268 SERPINE2P07093 398 aa14.36□□□□□ -0.11
USP39-209ENST00000458268 PIGPP57054 158 aa14.36□□□□□ -0.11
USP39-209ENST00000458268 SYNJ2BPP57105 145 aa14.36□□□□□ -0.11
USP39-209ENST00000458268 POU2AF1Q16633 256 aa14.36□□□□□ -0.11
USP39-209ENST00000458268 C15orf32Q32M92 178 aa14.36□□□□□ -0.11
USP39-209ENST00000458268 ZNF343Q6P1L6 599 aa14.36□□□□□ -0.11
USP39-209ENST00000458268 NECAP1Q8NC96 275 aa14.36□□□□□ -0.11
USP39-209ENST00000458268 OR10W1Q8NGF6 305 aa14.36□□□□□ -0.11
USP39-209ENST00000458268 MRGPRFQ96AM1 343 aa14.36□□□□□ -0.11
USP39-209ENST00000458268 ELOVL1Q9BW60 279 aa14.36□□□□□ -0.11
USP39-209ENST00000458268 QTRT1Q9BXR0 403 aaKnown RBP14.36□□□□□ -0.11
USP39-209ENST00000458268 COPZ2Q9P299 210 aa14.36□□□□□ -0.11
USP39-209ENST00000458268 NPIPB5A8MRT5 1133 aa14.35□□□□□ -0.11
USP39-209ENST00000458268 DISC1C4P0D8 188 aa14.35□□□□□ -0.11
USP39-209ENST00000458268 NDUFB8O95169 186 aa14.35□□□□□ -0.11
USP39-209ENST00000458268 AKAIN1P0CW23 69 aa14.35□□□□□ -0.11
USP39-209ENST00000458268 TRAPPC2P0DI81 140 aa14.35□□□□□ -0.11
USP39-209ENST00000458268 TRAPPC2BP0DI82 140 aa14.35□□□□□ -0.11
USP39-209ENST00000458268 MEF2DQ14814 521 aa14.35□□□□□ -0.11
USP39-209ENST00000458268 LHFPL1Q86WI0 220 aa14.35□□□□□ -0.11
USP39-209ENST00000458268 OR4C16Q8NGL9 310 aa14.35□□□□□ -0.11
USP39-209ENST00000458268 OR13C8Q8NGS7 320 aa14.35□□□□□ -0.11
USP39-209ENST00000458268 OR51B2Q9Y5P1 312 aa14.35□□□□□ -0.11
USP39-209ENST00000458268 TEX50A0A1B0GTY4 177 aa14.34□□□□□ -0.11
USP39-209ENST00000458268 PPP5D1E7EU14 171 aa14.34□□□□□ -0.11
USP39-209ENST00000458268 CD74P04233 296 aa14.34□□□□□ -0.11
USP39-209ENST00000458268 OR13C7P0DN81 318 aa14.34□□□□□ -0.11
USP39-209ENST00000458268 S100A5P33763 92 aa14.34□□□□□ -0.11
USP39-209ENST00000458268 SSBP1Q04837 148 aaKnown RBP14.34□□□□□ -0.11
USP39-209ENST00000458268 TRIM16LQ309B1 348 aa14.34□□□□□ -0.11
USP39-209ENST00000458268 PYDC2Q56P42 97 aa14.34□□□□□ -0.11
USP39-209ENST00000458268 ACSM6Q6P461 480 aa14.34□□□□□ -0.11
USP39-209ENST00000458268 H2BFWTQ7Z2G1 175 aa14.34□□□□□ -0.11
USP39-209ENST00000458268 ZNF429Q86V71 674 aa14.34□□□□□ -0.11
USP39-209ENST00000458268 CCDC71LQ8N9Z2 235 aa14.34□□□□□ -0.11
USP39-209ENST00000458268 OR1L8Q8NGR8 309 aa14.34□□□□□ -0.11
USP39-209ENST00000458268 TERB2Q8NHR7 220 aa14.34□□□□□ -0.11
USP39-209ENST00000458268 RNASE11Q8TAA1 199 aaKnown RBP14.34□□□□□ -0.11
USP39-209ENST00000458268 ZFAND1Q8TCF1 268 aa14.34□□□□□ -0.11
USP39-209ENST00000458268 MCUBQ9NWR8 336 aa14.34□□□□□ -0.11
USP39-209ENST00000458268 C14orf166Q9Y224 244 aaKnown RBP14.34□□□□□ -0.11
USP39-209ENST00000458268 ZNF256Q9Y2P7 627 aaPredicted RBP14.34□□□□□ -0.11
USP39-209ENST00000458268 PRKDCP78527 4128 aaKnown RBP14.34□□□□□ -0.11
USP39-209ENST00000458268 TRBV9A0A0B4J1U6 114 aa14.33□□□□□ -0.12
USP39-209ENST00000458268 IGLC7A0M8Q6 106 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms