RNA–Protein interactions for RNA: ENST00000458013.6

SNX27-204, Transcript of sorting nexin family member 27, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SNX27, Length 6,403 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-204ENST00000458013 FGF5P12034 268 aa16.66■□□□□ 0.26
SNX27-204ENST00000458013 SRD5A1P18405 259 aa16.66■□□□□ 0.26
SNX27-204ENST00000458013 TEX45Q8NA69 505 aa16.66■□□□□ 0.26
SNX27-204ENST00000458013 NPCDR1Q9BY65 106 aa16.66■□□□□ 0.26
SNX27-204ENST00000458013 C11orf68Q9H3H3 251 aaKnown RBP16.66■□□□□ 0.26
SNX27-204ENST00000458013 IGHV4-39P01824 125 aa16.66■□□□□ 0.26
SNX27-204ENST00000458013 SELENOTP62341 195 aa16.66■□□□□ 0.26
SNX27-204ENST00000458013 OR9G1Q8NH87 305 aa16.66■□□□□ 0.26
SNX27-204ENST00000458013 KIR2DL4Q99706 377 aa16.66■□□□□ 0.26
SNX27-204ENST00000458013 COL11A1P12107 1806 aaPredicted RBP16.66■□□□□ 0.26
SNX27-204ENST00000458013 JOSD1Q15040 202 aaPredicted RBP16.66■□□□□ 0.26
SNX27-204ENST00000458013 HBBP68871 147 aa16.65■□□□□ 0.26
SNX27-204ENST00000458013 MIR17HGQ75NE6 70 aa16.65■□□□□ 0.26
SNX27-204ENST00000458013 SIPA1L3O60292 1781 aaPredicted RBP16.65■□□□□ 0.26
SNX27-204ENST00000458013 NUDT10Q8NFP7 164 aa16.65■□□□□ 0.26
SNX27-204ENST00000458013 NUDT11Q96G61 164 aa16.65■□□□□ 0.26
SNX27-204ENST00000458013 PKIBQ9C010 78 aa16.65■□□□□ 0.26
SNX27-204ENST00000458013 MSGN1A6NI15 193 aa16.65■□□□□ 0.26
SNX27-204ENST00000458013 LIPFP07098 398 aa16.65■□□□□ 0.26
SNX27-204ENST00000458013 CD1AP06126 327 aa16.65■□□□□ 0.26
SNX27-204ENST00000458013 C1QTNF12Q5T7M4 302 aa16.65■□□□□ 0.26
SNX27-204ENST00000458013 ZNF708P17019 499 aa16.65■□□□□ 0.26
SNX27-204ENST00000458013 PRELID3AQ96N28 172 aa16.65■□□□□ 0.26
SNX27-204ENST00000458013 APOMO95445 188 aa16.64■□□□□ 0.25
SNX27-204ENST00000458013 TNFRSF18Q9Y5U5 241 aa16.64■□□□□ 0.25
SNX27-204ENST00000458013 TRAV30A0A087WSZ9 112 aa16.64■□□□□ 0.25
SNX27-204ENST00000458013 PEX7O00628 323 aa16.64■□□□□ 0.25
SNX27-204ENST00000458013 C11orf44Q8N8P7 122 aa16.64■□□□□ 0.25
SNX27-204ENST00000458013 SMIM8Q96KF7 97 aa16.64■□□□□ 0.25
SNX27-204ENST00000458013 RPS20P60866 119 aaKnown RBP16.64■□□□□ 0.25
SNX27-204ENST00000458013 BSPH1Q075Z2 132 aa16.64■□□□□ 0.25
SNX27-204ENST00000458013 TCF24Q7RTU0 167 aa16.64■□□□□ 0.25
SNX27-204ENST00000458013 ZNF414Q96IQ9 312 aa16.64■□□□□ 0.25
SNX27-204ENST00000458013 SSBP4Q9BWG4 385 aaPredicted RBP16.64■□□□□ 0.25
SNX27-204ENST00000458013 ERGP11308 486 aa16.64■□□□□ 0.25
SNX27-204ENST00000458013 C1orf100Q5SVJ3 147 aa16.64■□□□□ 0.25
SNX27-204ENST00000458013 FBXL7Q9UJT9 491 aa16.64■□□□□ 0.25
SNX27-204ENST00000458013 DNAL4O96015 105 aa16.64■□□□□ 0.25
SNX27-204ENST00000458013 ZNF324BQ6AW86 544 aaPredicted RBP16.64■□□□□ 0.25
SNX27-204ENST00000458013 ACP7Q6ZNF0 438 aa16.64■□□□□ 0.25
SNX27-204ENST00000458013 DNASE2BQ8WZ79 361 aa16.64■□□□□ 0.25
SNX27-204ENST00000458013 CDKN1AP38936 164 aa16.63■□□□□ 0.25
SNX27-204ENST00000458013 OR13A1Q8NGR1 328 aa16.63■□□□□ 0.25
SNX27-204ENST00000458013 MARF1Q9Y4F3 1742 aaKnown RBP16.63■□□□□ 0.25
SNX27-204ENST00000458013 A0A087WV48 116 aa16.63■□□□□ 0.25
SNX27-204ENST00000458013 DMRTA1Q5VZB9 504 aa16.63■□□□□ 0.25
SNX27-204ENST00000458013 ZNF837Q96EG3 531 aaPredicted RBP16.63■□□□□ 0.25
SNX27-204ENST00000458013 TMEM101Q96IK0 257 aa16.63■□□□□ 0.25
SNX27-204ENST00000458013 IGHV3-64A0A075B6Q5 118 aa16.63■□□□□ 0.25
SNX27-204ENST00000458013 C10orf126Q8N4M7 172 aa16.63■□□□□ 0.25
SNX27-204ENST00000458013 LINC01587Q99440 93 aa16.63■□□□□ 0.25
SNX27-204ENST00000458013 GFRA3O60609 400 aa16.63■□□□□ 0.25
SNX27-204ENST00000458013 OR5AN1Q8NGI8 311 aa16.63■□□□□ 0.25
SNX27-204ENST00000458013 SCGB3A1Q96QR1 104 aa16.63■□□□□ 0.25
SNX27-204ENST00000458013 MRPL20Q9BYC9 149 aaKnown RBP16.63■□□□□ 0.25
SNX27-204ENST00000458013 NHLRC3Q5JS37 347 aa16.62■□□□□ 0.25
SNX27-204ENST00000458013 SFTPCP11686 197 aa16.62■□□□□ 0.25
SNX27-204ENST00000458013 CDX1P47902 265 aaPredicted RBP16.62■□□□□ 0.25
SNX27-204ENST00000458013 DPRXA6NFQ7 191 aa16.62■□□□□ 0.25
SNX27-204ENST00000458013 NPIPB8E9PQR5 432 aa16.62■□□□□ 0.25
SNX27-204ENST00000458013 C10orf128Q5T292 105 aa16.62■□□□□ 0.25
SNX27-204ENST00000458013 CHRNA10Q9GZZ6 450 aa16.62■□□□□ 0.25
SNX27-204ENST00000458013 PPIFP30405 207 aaKnown RBP16.62■□□□□ 0.25
SNX27-204ENST00000458013 JKAMPQ9P055 326 aa16.62■□□□□ 0.25
SNX27-204ENST00000458013 POLR2AP24928 1970 aaKnown RBP16.61■□□□□ 0.25
SNX27-204ENST00000458013 ZNF729A6NN14 1252 aaPredicted RBP16.61■□□□□ 0.25
SNX27-204ENST00000458013 EVI2AP22794 236 aa16.61■□□□□ 0.25
SNX27-204ENST00000458013 EIF4EBP2Q13542 120 aaPredicted RBP16.61■□□□□ 0.25
SNX27-204ENST00000458013 TMEM186Q96B77 213 aa16.61■□□□□ 0.25
SNX27-204ENST00000458013 PLSCR2Q9NRY7 297 aa16.61■□□□□ 0.25
SNX27-204ENST00000458013 SHISA3A0PJX4 238 aa16.61■□□□□ 0.25
SNX27-204ENST00000458013 SYNGR3O43761 229 aa16.61■□□□□ 0.25
SNX27-204ENST00000458013 NPC2P61916 151 aa16.61■□□□□ 0.25
SNX27-204ENST00000458013 SRSF3P84103 164 aaKnown RBP16.61■□□□□ 0.25
SNX27-204ENST00000458013 LINC01590Q5TEZ4 76 aa16.61■□□□□ 0.25
SNX27-204ENST00000458013 RNASE7Q9H1E1 156 aaKnown RBP16.61■□□□□ 0.25
SNX27-204ENST00000458013 ASIPP42127 132 aa16.61■□□□□ 0.25
SNX27-204ENST00000458013 ZCCHC24Q8N2G6 241 aaKnown RBP16.61■□□□□ 0.25
SNX27-204ENST00000458013 GATAD1Q8WUU5 269 aa16.61■□□□□ 0.25
SNX27-204ENST00000458013 BEND2Q8NDZ0 799 aa16.61■□□□□ 0.25
SNX27-204ENST00000458013 TDRD6O60522 2096 aaKnown RBP16.61■□□□□ 0.25
SNX27-204ENST00000458013 C1QTNF9BB2RNN3 333 aa16.6■□□□□ 0.25
SNX27-204ENST00000458013 TUBGCP6Q96RT7 1819 aa16.6■□□□□ 0.25
SNX27-204ENST00000458013 NPDC1Q9NQX5 325 aaPredicted RBP16.6■□□□□ 0.25
SNX27-204ENST00000458013 LEPP41159 167 aa16.6■□□□□ 0.25
SNX27-204ENST00000458013 LINC00518Q8N0U6 118 aa16.6■□□□□ 0.25
SNX27-204ENST00000458013 SP7Q8TDD2 431 aaPredicted RBP16.6■□□□□ 0.25
SNX27-204ENST00000458013 TMEM106BQ9NUM4 274 aa16.6■□□□□ 0.25
SNX27-204ENST00000458013 C12orf77C9JDV5 145 aa16.6■□□□□ 0.25
SNX27-204ENST00000458013 IGHMP01871 453 aa16.6■□□□□ 0.25
SNX27-204ENST00000458013 TBX6O95947 436 aaPredicted RBP16.59■□□□□ 0.25
SNX27-204ENST00000458013 TSPOP30536 169 aa16.59■□□□□ 0.25
SNX27-204ENST00000458013 FAM169BQ8N8A8 192 aa16.59■□□□□ 0.25
SNX27-204ENST00000458013 LYNX1G3V0Z9 82 aa16.59■□□□□ 0.25
SNX27-204ENST00000458013 LYNX1P0DP58 116 aa16.59■□□□□ 0.25
SNX27-204ENST00000458013 TDGF1P13385 188 aa16.59■□□□□ 0.25
SNX27-204ENST00000458013 ZXDCQ2QGD7 858 aaPredicted RBP16.59■□□□□ 0.25
SNX27-204ENST00000458013 GREM1O60565 184 aa16.59■□□□□ 0.25
SNX27-204ENST00000458013 PPP1R27Q86WC6 154 aa16.59■□□□□ 0.25
SNX27-204ENST00000458013 MRPL32Q9BYC8 188 aaKnown RBP16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms