RNA–Protein interactions for RNA: ENST00000454542.5

HDAC4-205, Transcript of histone deacetylase 4, humanhuman

TSL 4

Gene HDAC4, Length 565 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-205ENST00000454542 RBMXL2O75526 392 aaKnown RBP10.96□□□□□ -0.65
HDAC4-205ENST00000454542 DUS4LO95620 317 aaKnown RBP10.96□□□□□ -0.65
HDAC4-205ENST00000454542 TRGV3P03979 118 aa10.96□□□□□ -0.65
HDAC4-205ENST00000454542 MYOD1P15172 320 aa10.96□□□□□ -0.65
HDAC4-205ENST00000454542 PI3P19957 117 aa10.96□□□□□ -0.65
HDAC4-205ENST00000454542 LPAR6P43657 344 aa10.96□□□□□ -0.65
HDAC4-205ENST00000454542 PIGPP57054 158 aa10.96□□□□□ -0.65
HDAC4-205ENST00000454542 ZNF45Q02386 682 aa10.96□□□□□ -0.65
HDAC4-205ENST00000454542 SCGB2B2Q4G0G5 96 aa10.96□□□□□ -0.65
HDAC4-205ENST00000454542 OR5T1Q8NG75 326 aa10.96□□□□□ -0.65
HDAC4-205ENST00000454542 OR11H1Q8NG94 326 aa10.96□□□□□ -0.65
HDAC4-205ENST00000454542 MARCH1Q8TCQ1 289 aa10.96□□□□□ -0.65
HDAC4-205ENST00000454542 DEDD2Q8WXF8 326 aa10.96□□□□□ -0.65
HDAC4-205ENST00000454542 SEC22AQ96IW7 307 aa10.96□□□□□ -0.65
HDAC4-205ENST00000454542 PHB2Q99623 299 aa10.96□□□□□ -0.65
HDAC4-205ENST00000454542 PRRT1Q99946 306 aa10.96□□□□□ -0.65
HDAC4-205ENST00000454542 THAP7Q9BT49 309 aaPredicted RBP10.96□□□□□ -0.65
HDAC4-205ENST00000454542 SRRQ9GZT4 340 aa10.96□□□□□ -0.65
HDAC4-205ENST00000454542 CRYGCP07315 174 aa10.95□□□□□ -0.66
HDAC4-205ENST00000454542 APELAP0DMC3 54 aa10.95□□□□□ -0.66
HDAC4-205ENST00000454542 IGLL1P15814 213 aa10.95□□□□□ -0.66
HDAC4-205ENST00000454542 RPA2P15927 270 aa10.95□□□□□ -0.66
HDAC4-205ENST00000454542 CD40LGP29965 261 aa10.95□□□□□ -0.66
HDAC4-205ENST00000454542 OR2B8PP59922 312 aa10.95□□□□□ -0.66
HDAC4-205ENST00000454542 ERVK-16P61578 105 aa10.95□□□□□ -0.66
HDAC4-205ENST00000454542 ZNF616Q08AN1 781 aa10.95□□□□□ -0.66
HDAC4-205ENST00000454542 OXLD1Q5BKU9 147 aa10.95□□□□□ -0.66
HDAC4-205ENST00000454542 THOC7Q6I9Y2 204 aaKnown RBP10.95□□□□□ -0.66
HDAC4-205ENST00000454542 C1QL4Q86Z23 238 aa10.95□□□□□ -0.66
HDAC4-205ENST00000454542 Q8N402 240 aa10.95□□□□□ -0.66
HDAC4-205ENST00000454542 CCDC71LQ8N9Z2 235 aa10.95□□□□□ -0.66
HDAC4-205ENST00000454542 DMBX1Q8NFW5 382 aa10.95□□□□□ -0.66
HDAC4-205ENST00000454542 OR51S1Q8NGJ8 323 aa10.95□□□□□ -0.66
HDAC4-205ENST00000454542 ZFAND1Q8TCF1 268 aa10.95□□□□□ -0.66
HDAC4-205ENST00000454542 MS4A10Q96PG2 267 aa10.95□□□□□ -0.66
HDAC4-205ENST00000454542 TP53RKQ96S44 253 aa10.95□□□□□ -0.66
HDAC4-205ENST00000454542 SRSF8Q9BRL6 282 aaKnown RBP10.95□□□□□ -0.66
HDAC4-205ENST00000454542 ALX4Q9H161 411 aaPredicted RBP10.95□□□□□ -0.66
HDAC4-205ENST00000454542 C5orf66Q9H5L9 145 aa10.95□□□□□ -0.66
HDAC4-205ENST00000454542 HRASLSQ9HDD0 168 aa10.95□□□□□ -0.66
HDAC4-205ENST00000454542 GPR132Q9UNW8 380 aa10.95□□□□□ -0.66
HDAC4-205ENST00000454542 ZNF257Q9Y2Q1 563 aa10.95□□□□□ -0.66
HDAC4-205ENST00000454542 NOTCH3Q9UM47 2321 aa10.94□□□□□ -0.66
HDAC4-205ENST00000454542 IGLC7A0M8Q6 106 aa10.94□□□□□ -0.66
HDAC4-205ENST00000454542 HMX3A6NHT5 357 aa10.94□□□□□ -0.66
HDAC4-205ENST00000454542 B3GALNT1O75752 331 aa10.94□□□□□ -0.66
HDAC4-205ENST00000454542 OR8U8P0C7N1 319 aa10.94□□□□□ -0.66
HDAC4-205ENST00000454542 P0C879 139 aa10.94□□□□□ -0.66
HDAC4-205ENST00000454542 CTRB1P17538 263 aa10.94□□□□□ -0.66
HDAC4-205ENST00000454542 UCP1P25874 307 aa10.94□□□□□ -0.66
HDAC4-205ENST00000454542 G6PCP35575 357 aa10.94□□□□□ -0.66
HDAC4-205ENST00000454542 PYDC2Q56P42 97 aa10.94□□□□□ -0.66
HDAC4-205ENST00000454542 SPANXN2Q5MJ10 180 aa10.94□□□□□ -0.66
HDAC4-205ENST00000454542 CTRB2Q6GPI1 263 aa10.94□□□□□ -0.66
HDAC4-205ENST00000454542 SLC25A42Q86VD7 318 aa10.94□□□□□ -0.66
HDAC4-205ENST00000454542 GDPD1Q8N9F7 314 aa10.94□□□□□ -0.66
HDAC4-205ENST00000454542 OR5B12Q96R08 314 aa10.94□□□□□ -0.66
HDAC4-205ENST00000454542 RTBDNQ9BSG5 229 aaPredicted RBP10.94□□□□□ -0.66
HDAC4-205ENST00000454542 COA4Q9NYJ1 87 aa10.94□□□□□ -0.66
HDAC4-205ENST00000454542 IGHV4OR15-8A0A075B7B6 117 aa10.93□□□□□ -0.66
HDAC4-205ENST00000454542 A0A087WW49 117 aa10.93□□□□□ -0.66
HDAC4-205ENST00000454542 A0A0G2JLM5 398 aa10.93□□□□□ -0.66
HDAC4-205ENST00000454542 FAM223BA6NKX1 122 aa10.93□□□□□ -0.66
HDAC4-205ENST00000454542 C15orf61A6NNL5 157 aa10.93□□□□□ -0.66
HDAC4-205ENST00000454542 KRASP01116 189 aa10.93□□□□□ -0.66
HDAC4-205ENST00000454542 IGHV3-11P01762 117 aa10.93□□□□□ -0.66
HDAC4-205ENST00000454542 AREGP15514 252 aa10.93□□□□□ -0.66
HDAC4-205ENST00000454542 PSMB6P28072 239 aa10.93□□□□□ -0.66
HDAC4-205ENST00000454542 DEFA5Q01523 94 aa10.93□□□□□ -0.66
HDAC4-205ENST00000454542 DEFA6Q01524 100 aa10.93□□□□□ -0.66
HDAC4-205ENST00000454542 FAM223AQ8IWN6 122 aa10.93□□□□□ -0.66
HDAC4-205ENST00000454542 OR1N2Q8NGR9 330 aa10.93□□□□□ -0.66
HDAC4-205ENST00000454542 USMG5Q96IX5 58 aa10.93□□□□□ -0.66
HDAC4-205ENST00000454542 FANCD2OSQ96PS1 177 aa10.93□□□□□ -0.66
HDAC4-205ENST00000454542 FYTTD1Q96QD9 318 aaKnown RBP10.93□□□□□ -0.66
HDAC4-205ENST00000454542 TSC22D3Q99576 134 aa10.93□□□□□ -0.66
HDAC4-205ENST00000454542 SDHCQ99643 169 aaPredicted RBP10.93□□□□□ -0.66
HDAC4-205ENST00000454542 MCRIP2Q9BUT9 160 aaKnown RBP10.93□□□□□ -0.66
HDAC4-205ENST00000454542 QTRT1Q9BXR0 403 aaKnown RBP10.93□□□□□ -0.66
HDAC4-205ENST00000454542 GPR61Q9BZJ8 451 aa10.93□□□□□ -0.66
HDAC4-205ENST00000454542 TMEM14BQ9NUH8 114 aa10.93□□□□□ -0.66
HDAC4-205ENST00000454542 COPZ2Q9P299 210 aa10.93□□□□□ -0.66
HDAC4-205ENST00000454542 C3orf85A0A1B0GTC6 90 aa10.92□□□□□ -0.66
HDAC4-205ENST00000454542 CRYM-AS1A6NIL9 109 aa10.92□□□□□ -0.66
HDAC4-205ENST00000454542 DBX1A6NMT0 343 aa10.92□□□□□ -0.66
HDAC4-205ENST00000454542 LINC01619G3V211 115 aa10.92□□□□□ -0.66
HDAC4-205ENST00000454542 IGKV1-5P01602 117 aa10.92□□□□□ -0.66
HDAC4-205ENST00000454542 AP3S2P59780 193 aa10.92□□□□□ -0.66
HDAC4-205ENST00000454542 RHOGP84095 191 aa10.92□□□□□ -0.66
HDAC4-205ENST00000454542 EGFEM1PQ0D2K5 195 aa10.92□□□□□ -0.66
HDAC4-205ENST00000454542 ZNF343Q6P1L6 599 aa10.92□□□□□ -0.66
HDAC4-205ENST00000454542 C19orf35Q6ZS72 473 aa10.92□□□□□ -0.66
HDAC4-205ENST00000454542 TMEM230Q96A57 120 aa10.92□□□□□ -0.66
HDAC4-205ENST00000454542 COMMD5Q9GZQ3 224 aa10.92□□□□□ -0.66
HDAC4-205ENST00000454542 NAA60Q9H7X0 242 aa10.92□□□□□ -0.66
HDAC4-205ENST00000454542 AKIP1Q9NQ31 210 aa10.92□□□□□ -0.66
HDAC4-205ENST00000454542 NDUFA4L2Q9NRX3 87 aa10.92□□□□□ -0.66
HDAC4-205ENST00000454542 ZNF355PQ9NSJ1 428 aa10.92□□□□□ -0.66
HDAC4-205ENST00000454542 SCP2D1Q9UJQ7 156 aa10.92□□□□□ -0.66
HDAC4-205ENST00000454542 PRNDQ9UKY0 176 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms