RNA–Protein interactions for RNA: ENST00000454468.5

SMPD4-213, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 1 (best)

Gene SMPD4, Length 3,586 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-213ENST00000454468 Q9UFV3 132 aa9.91□□□□□ -0.82
SMPD4-213ENST00000454468 MBD3L4A6NDZ8 208 aaPredicted RBP9.91□□□□□ -0.82
SMPD4-213ENST00000454468 MBD3L3A6NE82 208 aaPredicted RBP9.91□□□□□ -0.82
SMPD4-213ENST00000454468 MBD3L5A6NJ08 208 aaPredicted RBP9.91□□□□□ -0.82
SMPD4-213ENST00000454468 NDUFB3O43676 98 aa9.91□□□□□ -0.82
SMPD4-213ENST00000454468 CT45A1Q5HYN5 189 aa9.91□□□□□ -0.82
SMPD4-213ENST00000454468 ZNF506Q5JVG8 444 aa9.91□□□□□ -0.82
SMPD4-213ENST00000454468 FAM78BQ5VT40 261 aa9.91□□□□□ -0.82
SMPD4-213ENST00000454468 Q6ZS92 163 aa9.91□□□□□ -0.82
SMPD4-213ENST00000454468 OR4P4Q8NGL7 312 aa9.91□□□□□ -0.82
SMPD4-213ENST00000454468 CT45A3Q8NHU0 189 aa9.91□□□□□ -0.82
SMPD4-213ENST00000454468 MBD3L2Q8NHZ7 208 aaPredicted RBP9.91□□□□□ -0.82
SMPD4-213ENST00000454468 ABHD5Q8WTS1 349 aa9.91□□□□□ -0.82
SMPD4-213ENST00000454468 HARBI1Q96MB7 349 aa9.91□□□□□ -0.82
SMPD4-213ENST00000454468 PPP1R14DQ9NXH3 145 aa9.91□□□□□ -0.82
SMPD4-213ENST00000454468 HSPB7Q9UBY9 170 aa9.91□□□□□ -0.82
SMPD4-213ENST00000454468 ACACBO00763 2458 aa9.91□□□□□ -0.82
SMPD4-213ENST00000454468 hADV38S2A0JD32 116 aa9.91□□□□□ -0.82
SMPD4-213ENST00000454468 TOX4O94842 621 aa9.91□□□□□ -0.82
SMPD4-213ENST00000454468 PLAUP00749 431 aa9.91□□□□□ -0.82
SMPD4-213ENST00000454468 OR10J4P0C629 311 aa9.91□□□□□ -0.82
SMPD4-213ENST00000454468 NPY1RP25929 384 aa9.91□□□□□ -0.82
SMPD4-213ENST00000454468 THBS3P49746 956 aa9.91□□□□□ -0.82
SMPD4-213ENST00000454468 MLANAQ16655 118 aa9.91□□□□□ -0.82
SMPD4-213ENST00000454468 MOB3BQ86TA1 216 aa9.91□□□□□ -0.82
SMPD4-213ENST00000454468 ZNF295-AS1Q8N0V1 137 aa9.91□□□□□ -0.82
SMPD4-213ENST00000454468 PRSS33Q8NF86 280 aa9.91□□□□□ -0.82
SMPD4-213ENST00000454468 FAM57AQ8TBR7 257 aa9.91□□□□□ -0.82
SMPD4-213ENST00000454468 ARHGAP32A7KAX9 2087 aa9.91□□□□□ -0.82
SMPD4-213ENST00000454468 TANC2Q9HCD6 1990 aa9.9□□□□□ -0.82
SMPD4-213ENST00000454468 CREBBPQ92793 2442 aa9.9□□□□□ -0.82
SMPD4-213ENST00000454468 CTXND1A0A1B0GTU2 59 aa9.9□□□□□ -0.82
SMPD4-213ENST00000454468 UBE2CO00762 179 aa9.9□□□□□ -0.82
SMPD4-213ENST00000454468 PPP1R2P9O14990 202 aa9.9□□□□□ -0.82
SMPD4-213ENST00000454468 LY6HO94772 140 aa9.9□□□□□ -0.82
SMPD4-213ENST00000454468 APOA2P02652 100 aa9.9□□□□□ -0.82
SMPD4-213ENST00000454468 FABP4P15090 132 aa9.9□□□□□ -0.82
SMPD4-213ENST00000454468 WFIKKN1Q96NZ8 548 aa9.9□□□□□ -0.82
SMPD4-213ENST00000454468 MS4A5Q9H3V2 200 aa9.9□□□□□ -0.82
SMPD4-213ENST00000454468 PXMP4Q9Y6I8 212 aa9.9□□□□□ -0.82
SMPD4-213ENST00000454468 NAV3Q8IVL0 2385 aa9.9□□□□□ -0.82
SMPD4-213ENST00000454468 DVL1O14640 695 aa9.9□□□□□ -0.82
SMPD4-213ENST00000454468 ATP5G3P48201 142 aa9.9□□□□□ -0.82
SMPD4-213ENST00000454468 RBPJQ06330 500 aa9.9□□□□□ -0.82
SMPD4-213ENST00000454468 MBNL2Q5VZF2 373 aaKnown RBP9.9□□□□□ -0.82
SMPD4-213ENST00000454468 ASCL5Q7RTU5 278 aa9.9□□□□□ -0.82
SMPD4-213ENST00000454468 C16orf82Q7Z2V1 217 aa9.9□□□□□ -0.82
SMPD4-213ENST00000454468 PARLQ9H300 379 aa9.9□□□□□ -0.82
SMPD4-213ENST00000454468 OR51B2Q9Y5P1 312 aa9.9□□□□□ -0.82
SMPD4-213ENST00000454468 PPP5D1E7EU14 171 aa9.9□□□□□ -0.83
SMPD4-213ENST00000454468 PAX6P26367 422 aa9.9□□□□□ -0.83
SMPD4-213ENST00000454468 PYY3Q5JQD4 70 aa9.9□□□□□ -0.83
SMPD4-213ENST00000454468 C10orf91Q5T1B1 145 aa9.9□□□□□ -0.83
SMPD4-213ENST00000454468 OR4A47Q6IF82 309 aa9.9□□□□□ -0.83
SMPD4-213ENST00000454468 UNQ6494/PRO21346Q6UXR6 183 aa9.9□□□□□ -0.83
SMPD4-213ENST00000454468 JPT1Q9UK76 154 aa9.9□□□□□ -0.83
SMPD4-213ENST00000454468 HCFC1P51610 2035 aa9.89□□□□□ -0.83
SMPD4-213ENST00000454468 PPIAL4EA0A075B759 164 aa9.89□□□□□ -0.83
SMPD4-213ENST00000454468 PPIAL4DF5H284 164 aa9.89□□□□□ -0.83
SMPD4-213ENST00000454468 IGKV1-16P04430 117 aa9.89□□□□□ -0.83
SMPD4-213ENST00000454468 OR5G3P0C626 314 aa9.89□□□□□ -0.83
SMPD4-213ENST00000454468 PPIAL4FP0DN26 164 aa9.89□□□□□ -0.83
SMPD4-213ENST00000454468 MGST1P10620 155 aaKnown RBP9.89□□□□□ -0.83
SMPD4-213ENST00000454468 TMEM11P17152 192 aa9.89□□□□□ -0.83
SMPD4-213ENST00000454468 TRAT1Q6PIZ9 186 aa9.89□□□□□ -0.83
SMPD4-213ENST00000454468 OR10W1Q8NGF6 305 aa9.89□□□□□ -0.83
SMPD4-213ENST00000454468 SFXN3Q9BWM7 321 aa9.89□□□□□ -0.83
SMPD4-213ENST00000454468 GOLT1BQ9Y3E0 138 aa9.89□□□□□ -0.83
SMPD4-213ENST00000454468 PPIAL4AQ9Y536 164 aa9.89□□□□□ -0.83
SMPD4-213ENST00000454468 DPRXA6NFQ7 191 aa9.89□□□□□ -0.83
SMPD4-213ENST00000454468 CA2P00918 260 aa9.89□□□□□ -0.83
SMPD4-213ENST00000454468 HRASP01112 189 aa9.89□□□□□ -0.83
SMPD4-213ENST00000454468 CGAP01215 116 aa9.89□□□□□ -0.83
SMPD4-213ENST00000454468 ARL14EPLP0DKL9 152 aa9.89□□□□□ -0.83
SMPD4-213ENST00000454468 LMO1P25800 156 aa9.89□□□□□ -0.83
SMPD4-213ENST00000454468 GALR1P47211 349 aa9.89□□□□□ -0.83
SMPD4-213ENST00000454468 RAB7AP51149 207 aa9.89□□□□□ -0.83
SMPD4-213ENST00000454468 SLC24A4Q8NFF2 622 aa9.89□□□□□ -0.83
SMPD4-213ENST00000454468 METTL1Q9UBP6 276 aaKnown RBP9.89□□□□□ -0.83
SMPD4-213ENST00000454468 KBTBD11-OT1A0A1B0GTJ5 212 aa9.89□□□□□ -0.83
SMPD4-213ENST00000454468 FAM157AC9JC47 383 aa9.89□□□□□ -0.83
SMPD4-213ENST00000454468 IGLV1-44P01699 117 aa9.89□□□□□ -0.83
SMPD4-213ENST00000454468 ATP6V1FQ16864 119 aa9.89□□□□□ -0.83
SMPD4-213ENST00000454468 KRTCAP3Q53RY4 240 aa9.89□□□□□ -0.83
SMPD4-213ENST00000454468 LRRC10Q5BKY1 277 aa9.89□□□□□ -0.83
SMPD4-213ENST00000454468 C10orf55Q5SWW7 151 aa9.89□□□□□ -0.83
SMPD4-213ENST00000454468 HCP5Q6MZN7 132 aa9.89□□□□□ -0.83
SMPD4-213ENST00000454468 TMEM14EPQ6UXP3 125 aa9.89□□□□□ -0.83
SMPD4-213ENST00000454468 SPACA3Q8IXA5 215 aa9.89□□□□□ -0.83
SMPD4-213ENST00000454468 ELOVL1Q9BW60 279 aa9.89□□□□□ -0.83
SMPD4-213ENST00000454468 RAB9BQ9NP90 201 aa9.89□□□□□ -0.83
SMPD4-213ENST00000454468 BRWD1-AS2P59051 145 aa9.88□□□□□ -0.83
SMPD4-213ENST00000454468 GFI1BQ5VTD9 330 aa9.88□□□□□ -0.83
SMPD4-213ENST00000454468 OR10A7Q8NGE5 316 aa9.88□□□□□ -0.83
SMPD4-213ENST00000454468 NEIL1Q96FI4 390 aaPredicted RBP9.88□□□□□ -0.83
SMPD4-213ENST00000454468 DERL1Q9BUN8 251 aa9.88□□□□□ -0.83
SMPD4-213ENST00000454468 GPR61Q9BZJ8 451 aa9.88□□□□□ -0.83
SMPD4-213ENST00000454468 NGBQ9NPG2 151 aa9.88□□□□□ -0.83
SMPD4-213ENST00000454468 ZNF320A2RRD8 509 aa9.88□□□□□ -0.83
SMPD4-213ENST00000454468 FAM90A26D6RGX4 464 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 197.8 ms