RNA–Protein interactions for RNA: ENST00000453796.1

HSPG2-207, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 621 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-207ENST00000453796 DMRT1Q9Y5R6 373 aa11.14□□□□□ -0.63
HSPG2-207ENST00000453796 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.13□□□□□ -0.63
HSPG2-207ENST00000453796 BMPR1BO00238 502 aa11.13□□□□□ -0.63
HSPG2-207ENST00000453796 SPNP16150 400 aa11.13□□□□□ -0.63
HSPG2-207ENST00000453796 PSMB6P28072 239 aa11.13□□□□□ -0.63
HSPG2-207ENST00000453796 OR2B8PP59922 312 aa11.13□□□□□ -0.63
HSPG2-207ENST00000453796 TSPAN5P62079 268 aa11.13□□□□□ -0.63
HSPG2-207ENST00000453796 EXOSC2Q13868 293 aaKnown RBP11.13□□□□□ -0.63
HSPG2-207ENST00000453796 CMTM1Q8IZ96 169 aa11.13□□□□□ -0.63
HSPG2-207ENST00000453796 DYNC2LI1Q8TCX1 351 aa11.13□□□□□ -0.63
HSPG2-207ENST00000453796 RAB2BQ8WUD1 216 aa11.13□□□□□ -0.63
HSPG2-207ENST00000453796 FCAMRQ8WWV6 532 aa11.13□□□□□ -0.63
HSPG2-207ENST00000453796 DGCR14Q96DF8 476 aaKnown RBP11.13□□□□□ -0.63
HSPG2-207ENST00000453796 BCL7BQ9BQE9 202 aa11.13□□□□□ -0.63
HSPG2-207ENST00000453796 HRASLSQ9HDD0 168 aa11.13□□□□□ -0.63
HSPG2-207ENST00000453796 MTFP1Q9UDX5 166 aa11.13□□□□□ -0.63
HSPG2-207ENST00000453796 IGLC7A0M8Q6 106 aa11.12□□□□□ -0.63
HSPG2-207ENST00000453796 MARCH11A6NNE9 402 aa11.12□□□□□ -0.63
HSPG2-207ENST00000453796 M0QYG6 137 aa11.12□□□□□ -0.63
HSPG2-207ENST00000453796 CTDSP2O14595 271 aa11.12□□□□□ -0.63
HSPG2-207ENST00000453796 OR2J3O76001 311 aa11.12□□□□□ -0.63
HSPG2-207ENST00000453796 IGLV1-51P01701 117 aa11.12□□□□□ -0.63
HSPG2-207ENST00000453796 LPAR6P43657 344 aa11.12□□□□□ -0.63
HSPG2-207ENST00000453796 TMBIM6P55061 237 aa11.12□□□□□ -0.63
HSPG2-207ENST00000453796 SYNJ2BPP57105 145 aa11.12□□□□□ -0.63
HSPG2-207ENST00000453796 ATP5G2Q06055 141 aa11.12□□□□□ -0.63
HSPG2-207ENST00000453796 C15orf32Q32M92 178 aa11.12□□□□□ -0.63
HSPG2-207ENST00000453796 RNASE12Q5GAN4 147 aaKnown RBP11.12□□□□□ -0.63
HSPG2-207ENST00000453796 LPCAT3Q6P1A2 487 aa11.12□□□□□ -0.63
HSPG2-207ENST00000453796 LHFPL1Q86WI0 220 aa11.12□□□□□ -0.63
HSPG2-207ENST00000453796 LAX1Q8IWV1 398 aa11.12□□□□□ -0.63
HSPG2-207ENST00000453796 DMBX1Q8NFW5 382 aa11.12□□□□□ -0.63
HSPG2-207ENST00000453796 OR9G4Q8NGQ1 327 aa11.12□□□□□ -0.63
HSPG2-207ENST00000453796 OR6Q1Q8NGQ2 317 aa11.12□□□□□ -0.63
HSPG2-207ENST00000453796 OR4C12Q96R67 309 aa11.12□□□□□ -0.63
HSPG2-207ENST00000453796 ELOVL1Q9BW60 279 aa11.12□□□□□ -0.63
HSPG2-207ENST00000453796 FAM212BQ9NTI7 297 aaPredicted RBP11.12□□□□□ -0.63
HSPG2-207ENST00000453796 CD3DP04234 171 aa11.11□□□□□ -0.63
HSPG2-207ENST00000453796 GP9P14770 177 aa11.11□□□□□ -0.63
HSPG2-207ENST00000453796 RPA2P15927 270 aa11.11□□□□□ -0.63
HSPG2-207ENST00000453796 RPL5P46777 297 aaKnown RBP11.11□□□□□ -0.63
HSPG2-207ENST00000453796 CD69Q07108 199 aa11.11□□□□□ -0.63
HSPG2-207ENST00000453796 RPEL1Q2QD12 228 aa11.11□□□□□ -0.63
HSPG2-207ENST00000453796 PHLDA2Q53GA4 152 aa11.11□□□□□ -0.63
HSPG2-207ENST00000453796 C11orf87Q6NUJ2 197 aa11.11□□□□□ -0.63
HSPG2-207ENST00000453796 HAPLN4Q86UW8 402 aa11.11□□□□□ -0.63
HSPG2-207ENST00000453796 SRSF8Q9BRL6 282 aaKnown RBP11.11□□□□□ -0.63
HSPG2-207ENST00000453796 SIGLEC8Q9NYZ4 499 aa11.11□□□□□ -0.63
HSPG2-207ENST00000453796 CCDC59Q9P031 241 aaKnown RBP11.11□□□□□ -0.63
HSPG2-207ENST00000453796 IGLV11-55A0A075B6I3 123 aa11.1□□□□□ -0.63
HSPG2-207ENST00000453796 DPPA5A6NC42 116 aa11.1□□□□□ -0.63
HSPG2-207ENST00000453796 NDUFB8O95169 186 aa11.1□□□□□ -0.63
HSPG2-207ENST00000453796 LY86O95711 162 aa11.1□□□□□ -0.63
HSPG2-207ENST00000453796 IGKV1-39P01597 117 aa11.1□□□□□ -0.63
HSPG2-207ENST00000453796 CD74P04233 296 aa11.1□□□□□ -0.63
HSPG2-207ENST00000453796 IGKV1D-39P04432 117 aa11.1□□□□□ -0.63
HSPG2-207ENST00000453796 REG1AP05451 166 aa11.1□□□□□ -0.63
HSPG2-207ENST00000453796 CSN3P07498 182 aa11.1□□□□□ -0.63
HSPG2-207ENST00000453796 TBPP20226 339 aa11.1□□□□□ -0.63
HSPG2-207ENST00000453796 PTBP1P26599 531 aaKnown RBP eCLIP11.1□□□□□ -0.63
HSPG2-207ENST00000453796 G6PCP35575 357 aa11.1□□□□□ -0.63
HSPG2-207ENST00000453796 ERVK-16P61578 105 aa11.1□□□□□ -0.63
HSPG2-207ENST00000453796 RNASE10Q5GAN6 216 aaKnown RBP11.1□□□□□ -0.63
HSPG2-207ENST00000453796 FAM209BQ5JX69 171 aa11.1□□□□□ -0.63
HSPG2-207ENST00000453796 TBC1D26Q86UD7 250 aa11.1□□□□□ -0.63
HSPG2-207ENST00000453796 SLC38A6Q8IZM9 456 aa11.1□□□□□ -0.63
HSPG2-207ENST00000453796 ARRDC1Q8N5I2 433 aa11.1□□□□□ -0.63
HSPG2-207ENST00000453796 C15orf40Q8WUR7 153 aa11.1□□□□□ -0.63
HSPG2-207ENST00000453796 CCDC140Q96MF4 163 aa11.1□□□□□ -0.63
HSPG2-207ENST00000453796 QTRT1Q9BXR0 403 aaKnown RBP11.1□□□□□ -0.63
HSPG2-207ENST00000453796 COMMD5Q9GZQ3 224 aa11.1□□□□□ -0.63
HSPG2-207ENST00000453796 FBXL7Q9UJT9 491 aa11.1□□□□□ -0.63
HSPG2-207ENST00000453796 TEX50A0A1B0GTY4 177 aa11.09□□□□□ -0.63
HSPG2-207ENST00000453796 GABARAPH6UMI1 98 aa11.09□□□□□ -0.63
HSPG2-207ENST00000453796 RGS5O15539 181 aa11.09□□□□□ -0.63
HSPG2-207ENST00000453796 DHFRP00374 187 aa11.09□□□□□ -0.63
HSPG2-207ENST00000453796 KRASP01116 189 aa11.09□□□□□ -0.63
HSPG2-207ENST00000453796 HIST1H1BP16401 226 aaKnown RBP11.09□□□□□ -0.63
HSPG2-207ENST00000453796 RND3P61587 244 aa11.09□□□□□ -0.63
HSPG2-207ENST00000453796 THOC7Q6I9Y2 204 aaKnown RBP11.09□□□□□ -0.63
HSPG2-207ENST00000453796 TMEM229BQ8NBD8 167 aa11.09□□□□□ -0.63
HSPG2-207ENST00000453796 OR10W1Q8NGF6 305 aa11.09□□□□□ -0.63
HSPG2-207ENST00000453796 OR4D10Q8NGI6 311 aa11.09□□□□□ -0.63
HSPG2-207ENST00000453796 SEC22AQ96IW7 307 aa11.09□□□□□ -0.63
HSPG2-207ENST00000453796 HUWE1Q7Z6Z7 4374 aaKnown RBP11.09□□□□□ -0.63
HSPG2-207ENST00000453796 PPP5D1E7EU14 171 aa11.08□□□□□ -0.64
HSPG2-207ENST00000453796 H3BMQ9 156 aa11.08□□□□□ -0.64
HSPG2-207ENST00000453796 S100GP29377 79 aa11.08□□□□□ -0.64
HSPG2-207ENST00000453796 MECP2P51608 486 aaKnown RBP11.08□□□□□ -0.64
HSPG2-207ENST00000453796 MRPS10P82664 201 aaKnown RBP11.08□□□□□ -0.64
HSPG2-207ENST00000453796 SSBP1Q04837 148 aaKnown RBP11.08□□□□□ -0.64
HSPG2-207ENST00000453796 WT1-ASQ06250 92 aa11.08□□□□□ -0.64
HSPG2-207ENST00000453796 TATDN3Q17R31 274 aa11.08□□□□□ -0.64
HSPG2-207ENST00000453796 ADAMTSL5Q6ZMM2 481 aa11.08□□□□□ -0.64
HSPG2-207ENST00000453796 OR1L8Q8NGR8 309 aa11.08□□□□□ -0.64
HSPG2-207ENST00000453796 ISOC1Q96CN7 298 aa11.08□□□□□ -0.64
HSPG2-207ENST00000453796 ZNF486Q96H40 463 aaPredicted RBP11.08□□□□□ -0.64
HSPG2-207ENST00000453796 SLIRPQ9GZT3 109 aaKnown RBP11.08□□□□□ -0.64
HSPG2-207ENST00000453796 NDUFA4L2Q9NRX3 87 aa11.08□□□□□ -0.64
HSPG2-207ENST00000453796 NSG2Q9Y328 171 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms