RNA–Protein interactions for RNA: ENST00000453285.1

SDC4P-201, Transcript of syndecan 4 pseudogene, humanhuman

BASIC

Gene SDC4P, Length 601 nt, Biotype processed pseudogene, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC4P-201ENST00000453285 E7EUB6 86 aa4.8□□□□□ -1.64
SDC4P-201ENST00000453285 J3QLI3 93 aa4.8□□□□□ -1.64
SDC4P-201ENST00000453285 RGS13O14921 159 aa4.8□□□□□ -1.64
SDC4P-201ENST00000453285 BCL2L11O43521 198 aa4.8□□□□□ -1.64
SDC4P-201ENST00000453285 SLC25A17O43808 307 aa4.8□□□□□ -1.64
SDC4P-201ENST00000453285 TSC22D2O75157 780 aa4.8□□□□□ -1.64
SDC4P-201ENST00000453285 MED6O75586 246 aa4.8□□□□□ -1.64
SDC4P-201ENST00000453285 NDUFA3O95167 84 aa4.8□□□□□ -1.64
SDC4P-201ENST00000453285 TGFAP01135 160 aa4.8□□□□□ -1.64
SDC4P-201ENST00000453285 FSHBP01225 129 aa4.8□□□□□ -1.64
SDC4P-201ENST00000453285 IGKV1D-33P01593 117 aa4.8□□□□□ -1.64
SDC4P-201ENST00000453285 IGKV1-33P01594 117 aa4.8□□□□□ -1.64
SDC4P-201ENST00000453285 SNRNP70P08621 437 aaKnown RBP4.8□□□□□ -1.64
SDC4P-201ENST00000453285 FGF2P09038 288 aa4.8□□□□□ -1.64
SDC4P-201ENST00000453285 PVALBP20472 110 aaPredicted RBP4.8□□□□□ -1.64
SDC4P-201ENST00000453285 CD24P25063 80 aa4.8□□□□□ -1.64
SDC4P-201ENST00000453285 NUP62P37198 522 aaPredicted RBP4.8□□□□□ -1.64
SDC4P-201ENST00000453285 F2RL1P55085 397 aa4.8□□□□□ -1.64
SDC4P-201ENST00000453285 RPL23AP62750 156 aaKnown RBP4.8□□□□□ -1.64
SDC4P-201ENST00000453285 VAMP2P63027 116 aa4.8□□□□□ -1.64
SDC4P-201ENST00000453285 SSBP2P81877 361 aaPredicted RBP4.8□□□□□ -1.64
SDC4P-201ENST00000453285 EWSR1Q01844 656 aaKnown RBP eCLIP4.8□□□□□ -1.64
SDC4P-201ENST00000453285 ARL16Q0P5N6 197 aa4.8□□□□□ -1.64
SDC4P-201ENST00000453285 PJVKQ0ZLH3 352 aa4.8□□□□□ -1.64
SDC4P-201ENST00000453285 VMA21Q3ZAQ7 101 aa4.8□□□□□ -1.64
SDC4P-201ENST00000453285 SPINK9Q5DT21 86 aa4.8□□□□□ -1.64
SDC4P-201ENST00000453285 FAM120AOSQ5T036 256 aa4.8□□□□□ -1.64
SDC4P-201ENST00000453285 CCDC144NLQ6NUI1 221 aa4.8□□□□□ -1.64
SDC4P-201ENST00000453285 TMEM14EPQ6UXP3 125 aa4.8□□□□□ -1.64
SDC4P-201ENST00000453285 HAPLN4Q86UW8 402 aa4.8□□□□□ -1.64
SDC4P-201ENST00000453285 CIARTQ8N365 385 aaPredicted RBP4.8□□□□□ -1.64
SDC4P-201ENST00000453285 NPBQ8NG41 125 aa4.8□□□□□ -1.64
SDC4P-201ENST00000453285 PIFOQ8TCI5 191 aa4.8□□□□□ -1.64
SDC4P-201ENST00000453285 OR4C12Q96R67 309 aa4.8□□□□□ -1.64
SDC4P-201ENST00000453285 ARPC5LQ9BPX5 153 aa4.8□□□□□ -1.64
SDC4P-201ENST00000453285 MEGF9Q9H1U4 602 aa4.8□□□□□ -1.64
SDC4P-201ENST00000453285 ZNF430Q9H8G1 570 aaPredicted RBP4.8□□□□□ -1.64
SDC4P-201ENST00000453285 WFDC1Q9HC57 220 aa4.8□□□□□ -1.64
SDC4P-201ENST00000453285 TPSG1Q9NRR2 321 aa4.8□□□□□ -1.64
SDC4P-201ENST00000453285 PSENENQ9NZ42 101 aa4.8□□□□□ -1.64
SDC4P-201ENST00000453285 PRNDQ9UKY0 176 aa4.8□□□□□ -1.64
SDC4P-201ENST00000453285 ZNF257Q9Y2Q1 563 aa4.8□□□□□ -1.64
SDC4P-201ENST00000453285 SIGLEC9Q9Y336 463 aa4.8□□□□□ -1.64
SDC4P-201ENST00000453285 OR51B2Q9Y5P1 312 aa4.8□□□□□ -1.64
SDC4P-201ENST00000453285 SOX21Q9Y651 276 aaPredicted RBP4.8□□□□□ -1.64
SDC4P-201ENST00000453285 A0A0U1RQK1 487 aa4.79□□□□□ -1.64
SDC4P-201ENST00000453285 KANTRA0A1W2PQU2 76 aa4.79□□□□□ -1.64
SDC4P-201ENST00000453285 C15orf62A8K5M9 175 aa4.79□□□□□ -1.64
SDC4P-201ENST00000453285 CEBPZOSA8MTT3 80 aa4.79□□□□□ -1.64
SDC4P-201ENST00000453285 INS-IGF2F8WCM5 200 aa4.79□□□□□ -1.64
SDC4P-201ENST00000453285 H3BP45 60 aa4.79□□□□□ -1.64
SDC4P-201ENST00000453285 FCN1O00602 326 aa4.79□□□□□ -1.64
SDC4P-201ENST00000453285 RRHO14718 337 aa4.79□□□□□ -1.64
SDC4P-201ENST00000453285 RBMXL2O75526 392 aaKnown RBP4.79□□□□□ -1.64
SDC4P-201ENST00000453285 SPDEFO95238 335 aa4.79□□□□□ -1.64
SDC4P-201ENST00000453285 MOSP00540 346 aa4.79□□□□□ -1.64
SDC4P-201ENST00000453285 IFNA17P01571 189 aa4.79□□□□□ -1.64
SDC4P-201ENST00000453285 C4BPBP20851 252 aa4.79□□□□□ -1.64
SDC4P-201ENST00000453285 CAV2P51636 162 aa4.79□□□□□ -1.64
SDC4P-201ENST00000453285 RPL8P62917 257 aaKnown RBP4.79□□□□□ -1.64
SDC4P-201ENST00000453285 PRCDQ00LT1 54 aa4.79□□□□□ -1.64
SDC4P-201ENST00000453285 PRSS8Q16651 343 aa4.79□□□□□ -1.64
SDC4P-201ENST00000453285 CYB5R2Q6BCY4 276 aa4.79□□□□□ -1.64
SDC4P-201ENST00000453285 TEX261Q6UWH6 196 aa4.79□□□□□ -1.64
SDC4P-201ENST00000453285 BRD3OSQ6XYD6 125 aa4.79□□□□□ -1.64
SDC4P-201ENST00000453285 SLC51BQ86UW2 128 aa4.79□□□□□ -1.64
SDC4P-201ENST00000453285 ZNF680Q8NEM1 530 aa4.79□□□□□ -1.64
SDC4P-201ENST00000453285 OR2T10Q8NGZ9 312 aa4.79□□□□□ -1.64
SDC4P-201ENST00000453285 OR5B3Q8NH48 314 aa4.79□□□□□ -1.64
SDC4P-201ENST00000453285 VSTM2AQ8TAG5 236 aa4.79□□□□□ -1.64
SDC4P-201ENST00000453285 DTD1Q8TEA8 209 aa4.79□□□□□ -1.64
SDC4P-201ENST00000453285 TMEM170AQ8WVE7 144 aa4.79□□□□□ -1.64
SDC4P-201ENST00000453285 CIB3Q96Q77 187 aaPredicted RBP4.79□□□□□ -1.64
SDC4P-201ENST00000453285 TSNAXQ99598 290 aaKnown RBP4.79□□□□□ -1.64
SDC4P-201ENST00000453285 SLC25A31Q9H0C2 315 aa4.79□□□□□ -1.64
SDC4P-201ENST00000453285 ARV1Q9H2C2 271 aa4.79□□□□□ -1.64
SDC4P-201ENST00000453285 FBXL15Q9H469 300 aa4.79□□□□□ -1.64
SDC4P-201ENST00000453285 NDUFA4L2Q9NRX3 87 aa4.79□□□□□ -1.64
SDC4P-201ENST00000453285 FKBP11Q9NYL4 201 aa4.79□□□□□ -1.64
SDC4P-201ENST00000453285 FBXL17Q9UF56 701 aa4.79□□□□□ -1.64
SDC4P-201ENST00000453285 CACFD1Q9UGQ2 172 aa4.79□□□□□ -1.64
SDC4P-201ENST00000453285 U3KQ87 197 aa4.79□□□□□ -1.64
SDC4P-201ENST00000453285 SONP18583 2426 aaKnown RBP4.79□□□□□ -1.64
SDC4P-201ENST00000453285 MXRA5Q9NR99 2828 aa4.79□□□□□ -1.64
SDC4P-201ENST00000453285 PRSS46E5RG02 174 aa4.78□□□□□ -1.64
SDC4P-201ENST00000453285 TAAR5O14804 337 aa4.78□□□□□ -1.64
SDC4P-201ENST00000453285 NBR2O15453 112 aa4.78□□□□□ -1.64
SDC4P-201ENST00000453285 CST7O76096 145 aa4.78□□□□□ -1.64
SDC4P-201ENST00000453285 LY86O95711 162 aa4.78□□□□□ -1.64
SDC4P-201ENST00000453285 OPN1MWP04001 364 aa4.78□□□□□ -1.64
SDC4P-201ENST00000453285 METTL15P1P0C7V9 234 aa4.78□□□□□ -1.64
SDC4P-201ENST00000453285 OPN1MW2P0DN77 364 aa4.78□□□□□ -1.64
SDC4P-201ENST00000453285 OPN1MW3P0DN78 364 aa4.78□□□□□ -1.64
SDC4P-201ENST00000453285 BRS3P32247 399 aa4.78□□□□□ -1.64
SDC4P-201ENST00000453285 MAS1LP35410 378 aa4.78□□□□□ -1.64
SDC4P-201ENST00000453285 SULT1A1P50225 295 aa4.78□□□□□ -1.64
SDC4P-201ENST00000453285 DYNLT3P51808 116 aa4.78□□□□□ -1.64
SDC4P-201ENST00000453285 KRTAP1-1Q07627 177 aa4.78□□□□□ -1.64
SDC4P-201ENST00000453285 BAXQ07812 192 aa4.78□□□□□ -1.64
SDC4P-201ENST00000453285 TMEM267Q0VDI3 215 aaPredicted RBP4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms