RNA–Protein interactions for RNA: ENST00000452372.1

COL9A3-202, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 5

Gene COL9A3, Length 596 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-202ENST00000452372 CCDC71LQ8N9Z2 235 aa15.49■□□□□ 0.07
COL9A3-202ENST00000452372 RAX2Q96IS3 184 aa15.49■□□□□ 0.07
COL9A3-202ENST00000452372 MS4A10Q96PG2 267 aa15.49■□□□□ 0.07
COL9A3-202ENST00000452372 P2RX4Q99571 388 aa15.49■□□□□ 0.07
COL9A3-202ENST00000452372 SRRQ9GZT4 340 aa15.49■□□□□ 0.07
COL9A3-202ENST00000452372 COPZ2Q9P299 210 aa15.49■□□□□ 0.07
COL9A3-202ENST00000452372 SCP2D1Q9UJQ7 156 aa15.49■□□□□ 0.07
COL9A3-202ENST00000452372 GPR132Q9UNW8 380 aa15.49■□□□□ 0.07
COL9A3-202ENST00000452372 E7EUB6 86 aa15.48■□□□□ 0.07
COL9A3-202ENST00000452372 CCL24O00175 119 aa15.48■□□□□ 0.07
COL9A3-202ENST00000452372 APELAP0DMC3 54 aa15.48■□□□□ 0.07
COL9A3-202ENST00000452372 RPA2P15927 270 aa15.48■□□□□ 0.07
COL9A3-202ENST00000452372 RUNX1Q01196 453 aa15.48■□□□□ 0.07
COL9A3-202ENST00000452372 MRPL41Q8IXM3 137 aaKnown RBP15.48■□□□□ 0.07
COL9A3-202ENST00000452372 LINC00482Q8N8I6 264 aa15.48■□□□□ 0.07
COL9A3-202ENST00000452372 DEDD2Q8WXF8 326 aa15.48■□□□□ 0.07
COL9A3-202ENST00000452372 RTBDNQ9BSG5 229 aaPredicted RBP15.48■□□□□ 0.07
COL9A3-202ENST00000452372 GNB4Q9HAV0 340 aa15.48■□□□□ 0.07
COL9A3-202ENST00000452372 ZNF355PQ9NSJ1 428 aa15.48■□□□□ 0.07
COL9A3-202ENST00000452372 MCUBQ9NWR8 336 aa15.48■□□□□ 0.07
COL9A3-202ENST00000452372 TEX22C9J3V5 150 aa15.47■□□□□ 0.07
COL9A3-202ENST00000452372 H0Y980 276 aa15.47■□□□□ 0.07
COL9A3-202ENST00000452372 I3L521 148 aa15.47■□□□□ 0.07
COL9A3-202ENST00000452372 TRGV3P03979 118 aa15.47■□□□□ 0.07
COL9A3-202ENST00000452372 OR9G9P0C7N8 305 aa15.47■□□□□ 0.07
COL9A3-202ENST00000452372 CD33P20138 364 aa15.47■□□□□ 0.07
COL9A3-202ENST00000452372 FAUP35544 74 aaKnown RBP15.47■□□□□ 0.07
COL9A3-202ENST00000452372 G6PCP35575 357 aa15.47■□□□□ 0.07
COL9A3-202ENST00000452372 TPPP2P59282 170 aa15.47■□□□□ 0.07
COL9A3-202ENST00000452372 DEFB136Q30KP8 78 aa15.47■□□□□ 0.07
COL9A3-202ENST00000452372 TTC9CQ8N5M4 171 aa15.47■□□□□ 0.07
COL9A3-202ENST00000452372 GDPD1Q8N9F7 314 aa15.47■□□□□ 0.07
COL9A3-202ENST00000452372 ADAD2Q8NCV1 583 aaKnown RBP15.47■□□□□ 0.07
COL9A3-202ENST00000452372 FYTTD1Q96QD9 318 aaKnown RBP15.47■□□□□ 0.07
COL9A3-202ENST00000452372 C14orf166Q9Y224 244 aaKnown RBP15.47■□□□□ 0.07
COL9A3-202ENST00000452372 C3orf85A0A1B0GTC6 90 aa15.46■□□□□ 0.07
COL9A3-202ENST00000452372 A0A1B0GW64 132 aa15.46■□□□□ 0.07
COL9A3-202ENST00000452372 IGKV1-39P01597 117 aa15.46■□□□□ 0.07
COL9A3-202ENST00000452372 IGKV1D-39P04432 117 aa15.46■□□□□ 0.07
COL9A3-202ENST00000452372 SERPINE2P07093 398 aa15.46■□□□□ 0.07
COL9A3-202ENST00000452372 MYOD1P15172 320 aa15.46■□□□□ 0.07
COL9A3-202ENST00000452372 SEC22AQ96IW7 307 aa15.46■□□□□ 0.07
COL9A3-202ENST00000452372 SCGB3A2Q96PL1 93 aa15.46■□□□□ 0.07
COL9A3-202ENST00000452372 DUX3Q96PT4 197 aa15.46■□□□□ 0.07
COL9A3-202ENST00000452372 TP53RKQ96S44 253 aa15.46■□□□□ 0.07
COL9A3-202ENST00000452372 COMMD5Q9GZQ3 224 aa15.46■□□□□ 0.07
COL9A3-202ENST00000452372 C5orf66Q9H5L9 145 aa15.46■□□□□ 0.07
COL9A3-202ENST00000452372 COA4Q9NYJ1 87 aa15.46■□□□□ 0.07
COL9A3-202ENST00000452372 HMX3A6NHT5 357 aa15.45■□□□□ 0.06
COL9A3-202ENST00000452372 CGB1A6NKQ9 187 aa15.45■□□□□ 0.06
COL9A3-202ENST00000452372 B3GALNT1O75752 331 aa15.45■□□□□ 0.06
COL9A3-202ENST00000452372 OR2B8PP59922 312 aa15.45■□□□□ 0.06
COL9A3-202ENST00000452372 SLC25A42Q86VD7 318 aa15.45■□□□□ 0.06
COL9A3-202ENST00000452372 OR11H1Q8NG94 326 aa15.45■□□□□ 0.06
COL9A3-202ENST00000452372 OR5B12Q96R08 314 aa15.45■□□□□ 0.06
COL9A3-202ENST00000452372 A0A0G2JLM5 398 aa15.44■□□□□ 0.06
COL9A3-202ENST00000452372 SNAPC5O75971 98 aa15.44■□□□□ 0.06
COL9A3-202ENST00000452372 LGALS1P09382 135 aaKnown RBP15.44■□□□□ 0.06
COL9A3-202ENST00000452372 ZNF45Q02386 682 aa15.44■□□□□ 0.06
COL9A3-202ENST00000452372 FHL3Q13643 280 aa15.44■□□□□ 0.06
COL9A3-202ENST00000452372 BAK1Q16611 211 aa15.44■□□□□ 0.06
COL9A3-202ENST00000452372 TSC22D3Q99576 134 aa15.44■□□□□ 0.06
COL9A3-202ENST00000452372 TEX50A0A1B0GTY4 177 aa15.43■□□□□ 0.06
COL9A3-202ENST00000452372 NPIPB5A8MRT5 1133 aa15.43■□□□□ 0.06
COL9A3-202ENST00000452372 CRYGCP07315 174 aa15.43■□□□□ 0.06
COL9A3-202ENST00000452372 UCP1P25874 307 aa15.43■□□□□ 0.06
COL9A3-202ENST00000452372 CNPY1Q3B7I2 92 aa15.43■□□□□ 0.06
COL9A3-202ENST00000452372 SP6Q3SY56 376 aa15.43■□□□□ 0.06
COL9A3-202ENST00000452372 ZNF57Q68EA5 555 aaPredicted RBP15.43■□□□□ 0.06
COL9A3-202ENST00000452372 LINC00299Q6ZSB3 139 aa15.43■□□□□ 0.06
COL9A3-202ENST00000452372 H2BFWTQ7Z2G1 175 aa15.43■□□□□ 0.06
COL9A3-202ENST00000452372 OR1N2Q8NGR9 330 aa15.43■□□□□ 0.06
COL9A3-202ENST00000452372 SDHCQ99643 169 aaPredicted RBP15.43■□□□□ 0.06
COL9A3-202ENST00000452372 SRSF8Q9BRL6 282 aaKnown RBP15.43■□□□□ 0.06
COL9A3-202ENST00000452372 NAA60Q9H7X0 242 aa15.43■□□□□ 0.06
COL9A3-202ENST00000452372 ZNF257Q9Y2Q1 563 aa15.43■□□□□ 0.06
COL9A3-202ENST00000452372 TEX13DA0A0J9YY54 714 aaPredicted RBP15.42■□□□□ 0.06
COL9A3-202ENST00000452372 C13orf42A0A1B0GVH6 325 aa15.42■□□□□ 0.06
COL9A3-202ENST00000452372 IGHV3-11P01762 117 aa15.42■□□□□ 0.06
COL9A3-202ENST00000452372 ZNF616Q08AN1 781 aa15.42■□□□□ 0.06
COL9A3-202ENST00000452372 TRIQKQ629K1 86 aa15.42■□□□□ 0.06
COL9A3-202ENST00000452372 OR1L8Q8NGR8 309 aa15.42■□□□□ 0.06
COL9A3-202ENST00000452372 RCC1LQ96I51 464 aaKnown RBP15.42■□□□□ 0.06
COL9A3-202ENST00000452372 USMG5Q96IX5 58 aa15.42■□□□□ 0.06
COL9A3-202ENST00000452372 QTRT1Q9BXR0 403 aaKnown RBP15.42■□□□□ 0.06
COL9A3-202ENST00000452372 ALX4Q9H161 411 aaPredicted RBP15.42■□□□□ 0.06
COL9A3-202ENST00000452372 FKBP11Q9NYL4 201 aa15.42■□□□□ 0.06
COL9A3-202ENST00000452372 PRNDQ9UKY0 176 aa15.42■□□□□ 0.06
COL9A3-202ENST00000452372 NSG2Q9Y328 171 aa15.42■□□□□ 0.06
COL9A3-202ENST00000452372 TRBV9A0A0B4J1U6 114 aa15.41■□□□□ 0.06
COL9A3-202ENST00000452372 CRYM-AS1A6NIL9 109 aa15.41■□□□□ 0.06
COL9A3-202ENST00000452372 ATG12O94817 140 aa15.41■□□□□ 0.06
COL9A3-202ENST00000452372 PRH1P02810 166 aa15.41■□□□□ 0.06
COL9A3-202ENST00000452372 TRAPPC2P0DI81 140 aa15.41■□□□□ 0.06
COL9A3-202ENST00000452372 TRAPPC2BP0DI82 140 aa15.41■□□□□ 0.06
COL9A3-202ENST00000452372 AREGP15514 252 aa15.41■□□□□ 0.06
COL9A3-202ENST00000452372 IGLL1P15814 213 aa15.41■□□□□ 0.06
COL9A3-202ENST00000452372 CTRB1P17538 263 aa15.41■□□□□ 0.06
COL9A3-202ENST00000452372 PSMB6P28072 239 aa15.41■□□□□ 0.06
COL9A3-202ENST00000452372 TRIM16LQ309B1 348 aa15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms