RNA–Protein interactions for RNA: ENST00000450303.6

PRPF40A-204, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 3

Gene PRPF40A, Length 496 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-204ENST00000450303 FCGR3BO75015 233 aa13.48□□□□□ -0.25
PRPF40A-204ENST00000450303 SERPINE2P07093 398 aa13.48□□□□□ -0.25
PRPF40A-204ENST00000450303 SLC25A4P12235 298 aa13.48□□□□□ -0.25
PRPF40A-204ENST00000450303 RPA2P15927 270 aa13.48□□□□□ -0.25
PRPF40A-204ENST00000450303 RPL30P62888 115 aaKnown RBP13.48□□□□□ -0.25
PRPF40A-204ENST00000450303 TMEM65Q6PI78 240 aa13.48□□□□□ -0.25
PRPF40A-204ENST00000450303 TMUB2Q71RG4 321 aa13.48□□□□□ -0.25
PRPF40A-204ENST00000450303 SPAG16Q8N0X2 631 aa13.48□□□□□ -0.25
PRPF40A-204ENST00000450303 OR4F17Q8NGA8 305 aa13.48□□□□□ -0.25
PRPF40A-204ENST00000450303 OR4S2Q8NH73 311 aa13.48□□□□□ -0.25
PRPF40A-204ENST00000450303 DDB2Q92466 427 aa13.48□□□□□ -0.25
PRPF40A-204ENST00000450303 TMEM230Q96A57 120 aa13.48□□□□□ -0.25
PRPF40A-204ENST00000450303 OR4F4Q96R69 305 aa13.48□□□□□ -0.25
PRPF40A-204ENST00000450303 GPHA2Q96T91 129 aa13.48□□□□□ -0.25
PRPF40A-204ENST00000450303 AIFM2Q9BRQ8 373 aa13.48□□□□□ -0.25
PRPF40A-204ENST00000450303 M0QZK8 103 aa13.47□□□□□ -0.25
PRPF40A-204ENST00000450303 RBFOX2O43251 390 aaKnown RBP eCLIP13.47□□□□□ -0.252e-9■■■■■ 32.3
PRPF40A-204ENST00000450303 ATG12O94817 140 aa13.47□□□□□ -0.25
PRPF40A-204ENST00000450303 HPRT1P00492 218 aa13.47□□□□□ -0.25
PRPF40A-204ENST00000450303 PRB2P02812 416 aaPredicted RBP13.47□□□□□ -0.25
PRPF40A-204ENST00000450303 SRPXP78539 464 aa13.47□□□□□ -0.25
PRPF40A-204ENST00000450303 BEAN1Q3B7T3 259 aa13.47□□□□□ -0.25
PRPF40A-204ENST00000450303 OXLD1Q5BKU9 147 aa13.47□□□□□ -0.25
PRPF40A-204ENST00000450303 OR2T10Q8NGZ9 312 aa13.47□□□□□ -0.25
PRPF40A-204ENST00000450303 FLYWCH2Q96CP2 140 aaKnown RBP13.47□□□□□ -0.25
PRPF40A-204ENST00000450303 GALNT14Q96FL9 552 aa13.47□□□□□ -0.25
PRPF40A-204ENST00000450303 RNF5Q99942 180 aa13.47□□□□□ -0.25
PRPF40A-204ENST00000450303 MFFQ9GZY8 342 aa13.47□□□□□ -0.25
PRPF40A-204ENST00000450303 ARL6Q9H0F7 186 aa13.47□□□□□ -0.25
PRPF40A-204ENST00000450303 TGP01266 2768 aa13.47□□□□□ -0.25
PRPF40A-204ENST00000450303 MOSP00540 346 aa13.46□□□□□ -0.25
PRPF40A-204ENST00000450303 OR5AC1P0C628 307 aa13.46□□□□□ -0.25
PRPF40A-204ENST00000450303 CXCL2P19875 107 aa13.46□□□□□ -0.25
PRPF40A-204ENST00000450303 NUP62P37198 522 aaPredicted RBP13.46□□□□□ -0.25
PRPF40A-204ENST00000450303 LINC00205P59089 165 aa13.46□□□□□ -0.25
PRPF40A-204ENST00000450303 RPS16P62249 146 aaKnown RBP13.46□□□□□ -0.25
PRPF40A-204ENST00000450303 OR2B11Q5JQS5 317 aa13.46□□□□□ -0.25
PRPF40A-204ENST00000450303 KHDC1LQ5JSQ8 128 aa13.46□□□□□ -0.25
PRPF40A-204ENST00000450303 SAMD5Q5TGI4 173 aa13.46□□□□□ -0.25
PRPF40A-204ENST00000450303 ZNF546Q86UE3 836 aa13.46□□□□□ -0.25
PRPF40A-204ENST00000450303 C5orf56Q8N8D9 126 aa13.46□□□□□ -0.25
PRPF40A-204ENST00000450303 OSR1Q8TAX0 266 aaPredicted RBP13.46□□□□□ -0.25
PRPF40A-204ENST00000450303 NOL4LQ96MY1 436 aaPredicted RBP13.46□□□□□ -0.25
PRPF40A-204ENST00000450303 NMES1Q9C002 83 aa13.46□□□□□ -0.25
PRPF40A-204ENST00000450303 LINC00527Q9UJ94 153 aa13.46□□□□□ -0.25
PRPF40A-204ENST00000450303 SHOXO15266 292 aa13.45□□□□□ -0.26
PRPF40A-204ENST00000450303 CRYZL1O95825 349 aa13.45□□□□□ -0.26
PRPF40A-204ENST00000450303 HRASP01112 189 aa13.45□□□□□ -0.26
PRPF40A-204ENST00000450303 UCP1P25874 307 aa13.45□□□□□ -0.26
PRPF40A-204ENST00000450303 LPAR6P43657 344 aa13.45□□□□□ -0.26
PRPF40A-204ENST00000450303 OR2F1Q13607 317 aa13.45□□□□□ -0.26
PRPF40A-204ENST00000450303 SP6Q3SY56 376 aa13.45□□□□□ -0.26
PRPF40A-204ENST00000450303 C11orf87Q6NUJ2 197 aa13.45□□□□□ -0.26
PRPF40A-204ENST00000450303 ZNF329Q86UD4 541 aa13.45□□□□□ -0.26
PRPF40A-204ENST00000450303 OR4X2Q8NGF9 303 aa13.45□□□□□ -0.26
PRPF40A-204ENST00000450303 EAF1Q96JC9 268 aaPredicted RBP13.45□□□□□ -0.26
PRPF40A-204ENST00000450303 TP53RKQ96S44 253 aa13.45□□□□□ -0.26
PRPF40A-204ENST00000450303 TMEM222Q9H0R3 208 aa13.45□□□□□ -0.26
PRPF40A-204ENST00000450303 PLEKHA2Q9HB19 425 aa13.45□□□□□ -0.26
PRPF40A-204ENST00000450303 NOTCH3Q9UM47 2321 aa13.45□□□□□ -0.26
PRPF40A-204ENST00000450303 C13orf42A0A1B0GVH6 325 aa13.44□□□□□ -0.26
PRPF40A-204ENST00000450303 KANTRA0A1W2PQU2 76 aa13.44□□□□□ -0.26
PRPF40A-204ENST00000450303 PSMB11A5LHX3 300 aa13.44□□□□□ -0.26
PRPF40A-204ENST00000450303 LINC01548A6NM66 108 aa13.44□□□□□ -0.26
PRPF40A-204ENST00000450303 DBX1A6NMT0 343 aa13.44□□□□□ -0.26
PRPF40A-204ENST00000450303 NCBP2LA6PVI3 153 aaKnown RBP13.44□□□□□ -0.26
PRPF40A-204ENST00000450303 CCSO14618 274 aa13.44□□□□□ -0.26
PRPF40A-204ENST00000450303 IFNA21P01568 189 aa13.44□□□□□ -0.26
PRPF40A-204ENST00000450303 PET100P0DJ07 73 aa13.44□□□□□ -0.26
PRPF40A-204ENST00000450303 LGALS7P47929 136 aa13.44□□□□□ -0.26
PRPF40A-204ENST00000450303 ERVK-16P61578 105 aa13.44□□□□□ -0.26
PRPF40A-204ENST00000450303 SUPT4H1P63272 117 aaKnown RBP13.44□□□□□ -0.26
PRPF40A-204ENST00000450303 EXOSC2Q13868 293 aaKnown RBP13.44□□□□□ -0.26
PRPF40A-204ENST00000450303 EBI3Q14213 229 aa13.44□□□□□ -0.26
PRPF40A-204ENST00000450303 TMEM177Q53S58 311 aa13.44□□□□□ -0.26
PRPF40A-204ENST00000450303 SLC51BQ86UW2 128 aa13.44□□□□□ -0.26
PRPF40A-204ENST00000450303 ZNF695Q8IW36 515 aa13.44□□□□□ -0.26
PRPF40A-204ENST00000450303 LGI3Q8N145 548 aa13.44□□□□□ -0.26
PRPF40A-204ENST00000450303 INO80EQ8NBZ0 244 aaPredicted RBP13.44□□□□□ -0.26
PRPF40A-204ENST00000450303 WDR89Q96FK6 387 aaPredicted RBP13.44□□□□□ -0.26
PRPF40A-204ENST00000450303 TSNAXQ99598 290 aaKnown RBP13.44□□□□□ -0.26
PRPF40A-204ENST00000450303 TSSC4Q9Y5U2 329 aaPredicted RBP13.44□□□□□ -0.26
PRPF40A-204ENST00000450303 PF4V1P10720 104 aa13.43□□□□□ -0.26
PRPF40A-204ENST00000450303 NQO2P16083 231 aa13.43□□□□□ -0.26
PRPF40A-204ENST00000450303 PSMB6P28072 239 aa13.43□□□□□ -0.26
PRPF40A-204ENST00000450303 ZNF345Q14585 488 aa13.43□□□□□ -0.26
PRPF40A-204ENST00000450303 TMEM187Q14656 261 aa13.43□□□□□ -0.26
PRPF40A-204ENST00000450303 CLLU1Q5K131 121 aa13.43□□□□□ -0.26
PRPF40A-204ENST00000450303 GLYATL2Q8WU03 294 aa13.43□□□□□ -0.26
PRPF40A-204ENST00000450303 PPP1R1CQ8WVI7 109 aa13.43□□□□□ -0.26
PRPF40A-204ENST00000450303 IL22RA2Q969J5 263 aa13.43□□□□□ -0.26
PRPF40A-204ENST00000450303 SEC22AQ96IW7 307 aa13.43□□□□□ -0.26
PRPF40A-204ENST00000450303 HARBI1Q96MB7 349 aa13.43□□□□□ -0.26
PRPF40A-204ENST00000450303 KIAA1456Q9P272 454 aa13.43□□□□□ -0.26
PRPF40A-204ENST00000450303 TRAV14DV4A0A0A6YYC5 116 aa13.42□□□□□ -0.26
PRPF40A-204ENST00000450303 FGF16O43320 207 aa13.42□□□□□ -0.26
PRPF40A-204ENST00000450303 RAMP3O60896 148 aa13.42□□□□□ -0.26
PRPF40A-204ENST00000450303 MPC2O95563 127 aa13.42□□□□□ -0.26
PRPF40A-204ENST00000450303 CDS2O95674 445 aa13.42□□□□□ -0.26
PRPF40A-204ENST00000450303 CD33P20138 364 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms