RNA–Protein interactions for RNA: ENST00000450251.5

USP53-202, Transcript of ubiquitin specific peptidase 53, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP53, Length 6,072 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-202ENST00000450251 MOSP00540 346 aa1.88□□□□□ -2.11
USP53-202ENST00000450251 PLAUP00749 431 aa1.88□□□□□ -2.11
USP53-202ENST00000450251 APOHP02749 345 aaPredicted RBP1.88□□□□□ -2.11
USP53-202ENST00000450251 C8orf88P0DMB2 117 aa1.88□□□□□ -2.11
USP53-202ENST00000450251 ACP1P24666 158 aa1.88□□□□□ -2.11
USP53-202ENST00000450251 RPL15P61313 204 aaKnown RBP1.88□□□□□ -2.11
USP53-202ENST00000450251 GNB2P62879 340 aa1.88□□□□□ -2.11
USP53-202ENST00000450251 ZXDAP98168 799 aa1.88□□□□□ -2.11
USP53-202ENST00000450251 CIRBPQ14011 172 aaKnown RBP1.88□□□□□ -2.11
USP53-202ENST00000450251 MARCH3Q86UD3 253 aa1.88□□□□□ -2.11
USP53-202ENST00000450251 LINC01465Q8N7H1 131 aa1.88□□□□□ -2.11
USP53-202ENST00000450251 BMPERQ8N8U9 685 aa1.88□□□□□ -2.11
USP53-202ENST00000450251 LRRC75AQ8NAA5 344 aa1.88□□□□□ -2.11
USP53-202ENST00000450251 NUDT8Q8WV74 236 aa1.88□□□□□ -2.11
USP53-202ENST00000450251 RDH5Q92781 318 aa1.88□□□□□ -2.11
USP53-202ENST00000450251 SNRNP40Q96DI7 357 aaKnown RBP1.88□□□□□ -2.11
USP53-202ENST00000450251 Q96M66 194 aa1.88□□□□□ -2.11
USP53-202ENST00000450251 CHAC1Q9BUX1 264 aa1.88□□□□□ -2.11
USP53-202ENST00000450251 HRASLS2Q9NWW9 162 aa1.88□□□□□ -2.11
USP53-202ENST00000450251 RBPJLQ9UBG7 517 aa1.88□□□□□ -2.11
USP53-202ENST00000450251 JPT1Q9UK76 154 aa1.88□□□□□ -2.11
USP53-202ENST00000450251 F11RQ9Y624 299 aaKnown RBP1.88□□□□□ -2.11
USP53-202ENST00000450251 CEP290O15078 2479 aa1.88□□□□□ -2.11
USP53-202ENST00000450251 MED19A0JLT2 244 aaPredicted RBP1.88□□□□□ -2.11
USP53-202ENST00000450251 MYADML2A6NDP7 307 aa1.88□□□□□ -2.11
USP53-202ENST00000450251 HSPB6O14558 160 aa1.88□□□□□ -2.11
USP53-202ENST00000450251 DUX1O43812 170 aa1.88□□□□□ -2.11
USP53-202ENST00000450251 INAFM2P0DMQ5 153 aa1.88□□□□□ -2.11
USP53-202ENST00000450251 PSG2P11465 335 aa1.88□□□□□ -2.11
USP53-202ENST00000450251 HMGA1P17096 107 aaKnown RBP1.88□□□□□ -2.11
USP53-202ENST00000450251 IGFBP2P18065 325 aa1.88□□□□□ -2.11
USP53-202ENST00000450251 ATP5EP56381 51 aaPredicted RBP1.88□□□□□ -2.11
USP53-202ENST00000450251 HERV-K104P63124 156 aa1.88□□□□□ -2.11
USP53-202ENST00000450251 SRSF1Q07955 248 aaKnown RBP eCLIP1.88□□□□□ -2.11
USP53-202ENST00000450251 POM121L1PQ3SYA9 428 aa1.88□□□□□ -2.11
USP53-202ENST00000450251 VMA21Q3ZAQ7 101 aa1.88□□□□□ -2.11
USP53-202ENST00000450251 SLC35E4Q6ICL7 350 aa1.88□□□□□ -2.11
USP53-202ENST00000450251 Q6Q795 121 aa1.88□□□□□ -2.11
USP53-202ENST00000450251 ORMDL3Q8N138 153 aa1.88□□□□□ -2.11
USP53-202ENST00000450251 LYG1Q8N1E2 194 aa1.88□□□□□ -2.11
USP53-202ENST00000450251 ZNF296Q8WUU4 475 aaPredicted RBP1.88□□□□□ -2.11
USP53-202ENST00000450251 LRRC29Q8WV35 223 aa1.88□□□□□ -2.11
USP53-202ENST00000450251 TMEM230Q96A57 120 aa1.88□□□□□ -2.11
USP53-202ENST00000450251 CNRIP1Q96F85 164 aaPredicted RBP1.88□□□□□ -2.11
USP53-202ENST00000450251 C20orf173Q96LM9 149 aa1.88□□□□□ -2.11
USP53-202ENST00000450251 DUX5Q96PT3 197 aa1.88□□□□□ -2.11
USP53-202ENST00000450251 VGLL1Q99990 258 aa1.88□□□□□ -2.11
USP53-202ENST00000450251 ERRFI1Q9UJM3 462 aaPredicted RBP1.88□□□□□ -2.11
USP53-202ENST00000450251 HILPDAQ9Y5L2 63 aa1.88□□□□□ -2.11
USP53-202ENST00000450251 CHD8Q9HCK8 2581 aa1.88□□□□□ -2.11
USP53-202ENST00000450251 DLL1O00548 723 aa1.88□□□□□ -2.11
USP53-202ENST00000450251 LILRA1O75019 489 aa1.88□□□□□ -2.11
USP53-202ENST00000450251 PGLYRP1O75594 196 aaPredicted RBP1.88□□□□□ -2.11
USP53-202ENST00000450251 NTN1O95631 604 aa1.88□□□□□ -2.11
USP53-202ENST00000450251 CFIP05156 583 aa1.88□□□□□ -2.11
USP53-202ENST00000450251 IL11P20809 199 aa1.88□□□□□ -2.11
USP53-202ENST00000450251 CKS2P33552 79 aa1.88□□□□□ -2.11
USP53-202ENST00000450251 CDKN1AP38936 164 aa1.88□□□□□ -2.11
USP53-202ENST00000450251 SRYQ05066 204 aa1.88□□□□□ -2.11
USP53-202ENST00000450251 RTP5Q14D33 572 aa1.88□□□□□ -2.11
USP53-202ENST00000450251 ZNF146Q15072 292 aa1.88□□□□□ -2.11
USP53-202ENST00000450251 SPRYD7Q5W111 196 aa1.88□□□□□ -2.11
USP53-202ENST00000450251 SPSB3Q6PJ21 355 aa1.88□□□□□ -2.11
USP53-202ENST00000450251 PRSS57Q6UWY2 283 aa1.88□□□□□ -2.11
USP53-202ENST00000450251 PRSS41Q7RTY9 318 aa1.88□□□□□ -2.11
USP53-202ENST00000450251 ZNF683Q8IZ20 524 aa1.88□□□□□ -2.11
USP53-202ENST00000450251 VKORC1L1Q8N0U8 176 aa1.88□□□□□ -2.11
USP53-202ENST00000450251 CIARTQ8N365 385 aaPredicted RBP1.88□□□□□ -2.11
USP53-202ENST00000450251 SYT8Q8NBV8 401 aa1.88□□□□□ -2.11
USP53-202ENST00000450251 NUP35Q8NFH5 326 aa1.88□□□□□ -2.11
USP53-202ENST00000450251 GATAD1Q8WUU5 269 aa1.88□□□□□ -2.11
USP53-202ENST00000450251 VOPP1Q96AW1 172 aa1.88□□□□□ -2.11
USP53-202ENST00000450251 PRELID3AQ96N28 172 aa1.88□□□□□ -2.11
USP53-202ENST00000450251 RASL11BQ9BPW5 248 aa1.88□□□□□ -2.11
USP53-202ENST00000450251 DEFB126Q9BYW3 111 aa1.88□□□□□ -2.11
USP53-202ENST00000450251 GLIS2Q9BZE0 524 aaPredicted RBP1.88□□□□□ -2.11
USP53-202ENST00000450251 PRR13Q9NZ81 148 aa1.88□□□□□ -2.11
USP53-202ENST00000450251 AMMECR1Q9Y4X0 333 aaPredicted RBP1.88□□□□□ -2.11
USP53-202ENST00000450251 ATP23Q9Y6H3 246 aa1.88□□□□□ -2.11
USP53-202ENST00000450251 TRIOBPQ9H2D6 2365 aa1.88□□□□□ -2.11
USP53-202ENST00000450251 CENPVL1A0A0U1RR11 272 aa1.87□□□□□ -2.11
USP53-202ENST00000450251 A0A1B0GUT8 65 aa1.87□□□□□ -2.11
USP53-202ENST00000450251 CSN3P07498 182 aa1.87□□□□□ -2.11
USP53-202ENST00000450251 CELA3AP09093 270 aa1.87□□□□□ -2.11
USP53-202ENST00000450251 FAM106CPP0CH98 169 aa1.87□□□□□ -2.11
USP53-202ENST00000450251 CLDN2P57739 230 aa1.87□□□□□ -2.11
USP53-202ENST00000450251 ZNF816Q0VGE8 651 aaPredicted RBP1.87□□□□□ -2.11
USP53-202ENST00000450251 KLRB1Q12918 225 aa1.87□□□□□ -2.11
USP53-202ENST00000450251 FAM110CQ1W6H9 321 aa1.87□□□□□ -2.11
USP53-202ENST00000450251 FAM106AQ4KMX7 169 aa1.87□□□□□ -2.11
USP53-202ENST00000450251 SPATA31B1PQ5VZV4 182 aa1.87□□□□□ -2.11
USP53-202ENST00000450251 SLC25A48Q6ZT89 311 aaKnown RBP1.87□□□□□ -2.11
USP53-202ENST00000450251 BCL6BQ8N143 479 aaPredicted RBP1.87□□□□□ -2.11
USP53-202ENST00000450251 MRPL43Q8N983 215 aaKnown RBP1.87□□□□□ -2.11
USP53-202ENST00000450251 ZNF492Q9P255 531 aa1.87□□□□□ -2.11
USP53-202ENST00000450251 RAXQ9Y2V3 346 aa1.87□□□□□ -2.11
USP53-202ENST00000450251 BDP1A6H8Y1 2624 aa1.87□□□□□ -2.11
USP53-202ENST00000450251 hCG_38984A0A1B0GV85 526 aa1.87□□□□□ -2.11
USP53-202ENST00000450251 A0A1W2PQF6 199 aa1.87□□□□□ -2.11
USP53-202ENST00000450251 MANSC4A6NHS7 340 aaPredicted RBP1.87□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms