RNA–Protein interactions for RNA: ENST00000450169.6

LSM5-208, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM5, Length 2,258 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-208ENST00000450169 FAM90A5PA8MXJ8 464 aa7.19□□□□□ -1.26
LSM5-208ENST00000450169 FAM90A23PA8MXZ1 464 aa7.19□□□□□ -1.26
LSM5-208ENST00000450169 H3BMH7 237 aa7.19□□□□□ -1.26
LSM5-208ENST00000450169 H3BUT2 72 aa7.19□□□□□ -1.26
LSM5-208ENST00000450169 CLDN14O95500 239 aa7.19□□□□□ -1.26
LSM5-208ENST00000450169 FAM90A15PP0C7V4 464 aa7.19□□□□□ -1.26
LSM5-208ENST00000450169 FAM90A13PP0C7W8 464 aa7.19□□□□□ -1.26
LSM5-208ENST00000450169 FAM90A14PP0C7W9 464 aa7.19□□□□□ -1.26
LSM5-208ENST00000450169 FAM90A24PP0C7X0 464 aa7.19□□□□□ -1.26
LSM5-208ENST00000450169 STAG3L2P0CL84 134 aa7.19□□□□□ -1.26
LSM5-208ENST00000450169 STAG3L3P0CL85 134 aa7.19□□□□□ -1.26
LSM5-208ENST00000450169 HTR1DP28221 377 aa7.19□□□□□ -1.26
LSM5-208ENST00000450169 GNG4P50150 75 aa7.19□□□□□ -1.26
LSM5-208ENST00000450169 HSD52Q0P140 79 aa7.19□□□□□ -1.26
LSM5-208ENST00000450169 RAB30Q15771 203 aa7.19□□□□□ -1.26
LSM5-208ENST00000450169 ZNF611Q8N823 705 aa7.19□□□□□ -1.26
LSM5-208ENST00000450169 OR5A1Q8NGJ0 315 aa7.19□□□□□ -1.26
LSM5-208ENST00000450169 CLCF1Q9UBD9 225 aa7.19□□□□□ -1.26
LSM5-208ENST00000450169 ZNF835Q9Y2P0 537 aa7.19□□□□□ -1.26
LSM5-208ENST00000450169 NCOA6Q14686 2063 aaPredicted RBP7.19□□□□□ -1.26
LSM5-208ENST00000450169 C2orf16Q68DN1 1984 aa7.19□□□□□ -1.26
LSM5-208ENST00000450169 SYS1-DBNDD2H3BUS1 97 aa7.18□□□□□ -1.26
LSM5-208ENST00000450169 RRHO14718 337 aa7.18□□□□□ -1.26
LSM5-208ENST00000450169 TLX3O43711 291 aaPredicted RBP7.18□□□□□ -1.26
LSM5-208ENST00000450169 EFNA2O43921 213 aa7.18□□□□□ -1.26
LSM5-208ENST00000450169 IGLV2-14P01704 120 aa7.18□□□□□ -1.26
LSM5-208ENST00000450169 GPM6AP51674 278 aa7.18□□□□□ -1.26
LSM5-208ENST00000450169 C17orf67Q0P5P2 114 aa7.18□□□□□ -1.26
LSM5-208ENST00000450169 KLF5Q13887 457 aaPredicted RBP7.18□□□□□ -1.26
LSM5-208ENST00000450169 CENPWQ5EE01 88 aa7.18□□□□□ -1.26
LSM5-208ENST00000450169 RHBDD2Q6NTF9 364 aa7.18□□□□□ -1.26
LSM5-208ENST00000450169 DOLPP1Q86YN1 238 aa7.18□□□□□ -1.26
LSM5-208ENST00000450169 FGFRL1Q8N441 504 aa7.18□□□□□ -1.26
LSM5-208ENST00000450169 OR10AG1Q8NH19 301 aa7.18□□□□□ -1.26
LSM5-208ENST00000450169 FAM222BQ8WU58 562 aa7.18□□□□□ -1.26
LSM5-208ENST00000450169 SSBP4Q9BWG4 385 aaPredicted RBP7.18□□□□□ -1.26
LSM5-208ENST00000450169 TMEM191AQ9H0A3 160 aa7.18□□□□□ -1.26
LSM5-208ENST00000450169 ZNF331Q9NQX6 463 aaPredicted RBP7.18□□□□□ -1.26
LSM5-208ENST00000450169 OSTCQ9NRP0 149 aa7.18□□□□□ -1.26
LSM5-208ENST00000450169 COPS7AQ9UBW8 275 aa7.18□□□□□ -1.26
LSM5-208ENST00000450169 ARHGEF17Q96PE2 2063 aaPredicted RBP7.18□□□□□ -1.26
LSM5-208ENST00000450169 SMIM27A0A1W2PRY6 76 aa7.18□□□□□ -1.26
LSM5-208ENST00000450169 H3BRM9 83 aa7.18□□□□□ -1.26
LSM5-208ENST00000450169 APOA2P02652 100 aa7.18□□□□□ -1.26
LSM5-208ENST00000450169 MGST1P10620 155 aaKnown RBP7.18□□□□□ -1.26
LSM5-208ENST00000450169 RPL24P83731 157 aaKnown RBP7.18□□□□□ -1.26
LSM5-208ENST00000450169 TMEM97Q5BJF2 176 aa7.18□□□□□ -1.26
LSM5-208ENST00000450169 FAM120AOSQ5T036 256 aa7.18□□□□□ -1.26
LSM5-208ENST00000450169 ZBTB34Q8NCN2 500 aa7.18□□□□□ -1.26
LSM5-208ENST00000450169 OXGR1Q96P68 337 aa7.18□□□□□ -1.26
LSM5-208ENST00000450169 ZNF391Q9UJN7 358 aa7.18□□□□□ -1.26
LSM5-208ENST00000450169 WDR83OSQ9Y284 106 aa7.18□□□□□ -1.26
LSM5-208ENST00000450169 IGKV3D-11A0A0A0MRZ8 115 aa7.17□□□□□ -1.26
LSM5-208ENST00000450169 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP7.17□□□□□ -1.26
LSM5-208ENST00000450169 A0A0G2JLM5 398 aa7.17□□□□□ -1.26
LSM5-208ENST00000450169 TEX48A0A1B0GUV7 120 aa7.17□□□□□ -1.26
LSM5-208ENST00000450169 PSMB11A5LHX3 300 aa7.17□□□□□ -1.26
LSM5-208ENST00000450169 IZUMO1RA6ND01 250 aa7.17□□□□□ -1.26
LSM5-208ENST00000450169 A6NDN8 102 aa7.17□□□□□ -1.26
LSM5-208ENST00000450169 F2RL2O00254 374 aa7.17□□□□□ -1.26
LSM5-208ENST00000450169 ZG16O60844 167 aa7.17□□□□□ -1.26
LSM5-208ENST00000450169 RHBDL1O75783 438 aa7.17□□□□□ -1.26
LSM5-208ENST00000450169 HIST1H1EP10412 219 aaKnown RBP7.17□□□□□ -1.26
LSM5-208ENST00000450169 UQCRFS1P47985 274 aa7.17□□□□□ -1.26
LSM5-208ENST00000450169 PPOXP50336 477 aa7.17□□□□□ -1.26
LSM5-208ENST00000450169 SUMO3P55854 103 aaPredicted RBP7.17□□□□□ -1.26
LSM5-208ENST00000450169 RPL8P62917 257 aaKnown RBP7.17□□□□□ -1.26
LSM5-208ENST00000450169 C2orf91Q6ZV80 131 aa7.17□□□□□ -1.26
LSM5-208ENST00000450169 BPIFA4PQ86YQ2 179 aa7.17□□□□□ -1.26
LSM5-208ENST00000450169 IL1F10Q8WWZ1 152 aa7.17□□□□□ -1.26
LSM5-208ENST00000450169 RLN3Q8WXF3 142 aa7.17□□□□□ -1.26
LSM5-208ENST00000450169 NABP1Q96AH0 204 aa7.17□□□□□ -1.26
LSM5-208ENST00000450169 PHF7Q9BWX1 381 aaPredicted RBP7.17□□□□□ -1.26
LSM5-208ENST00000450169 MS4A6AQ9H2W1 248 aa7.17□□□□□ -1.26
LSM5-208ENST00000450169 KCNS2Q9ULS6 477 aa7.17□□□□□ -1.26
LSM5-208ENST00000450169 ISLRO14498 428 aa7.17□□□□□ -1.26
LSM5-208ENST00000450169 BCL3P20749 454 aa7.17□□□□□ -1.26
LSM5-208ENST00000450169 GCHFRP30047 84 aa7.17□□□□□ -1.26
LSM5-208ENST00000450169 TCTEX1D4Q5JR98 221 aa7.17□□□□□ -1.26
LSM5-208ENST00000450169 SLC35E4Q6ICL7 350 aa7.17□□□□□ -1.26
LSM5-208ENST00000450169 RASL11AQ6T310 242 aa7.17□□□□□ -1.26
LSM5-208ENST00000450169 PQLC2Q6ZP29 291 aa7.17□□□□□ -1.26
LSM5-208ENST00000450169 SHISA6Q6ZSJ9 500 aa7.17□□□□□ -1.26
LSM5-208ENST00000450169 PPP1R35Q8TAP8 253 aa7.17□□□□□ -1.26
LSM5-208ENST00000450169 SLC37A2Q8TED4 501 aa7.17□□□□□ -1.26
LSM5-208ENST00000450169 WIPF2Q8TF74 440 aaPredicted RBP7.17□□□□□ -1.26
LSM5-208ENST00000450169 PIGCQ92535 297 aa7.17□□□□□ -1.26
LSM5-208ENST00000450169 SPSB4Q96A44 273 aa7.17□□□□□ -1.26
LSM5-208ENST00000450169 PERPQ96FX8 193 aa7.17□□□□□ -1.26
LSM5-208ENST00000450169 OR2V2Q96R30 315 aa7.17□□□□□ -1.26
LSM5-208ENST00000450169 NAA38Q9BRA0 125 aaKnown RBP7.17□□□□□ -1.26
LSM5-208ENST00000450169 DEPPQ9NTK1 212 aa7.17□□□□□ -1.26
LSM5-208ENST00000450169 MTCH1Q9NZJ7 389 aa7.17□□□□□ -1.26
LSM5-208ENST00000450169 IL36RNQ9UBH0 155 aa7.17□□□□□ -1.26
LSM5-208ENST00000450169 SPCS1Q9Y6A9 102 aa7.17□□□□□ -1.26
LSM5-208ENST00000450169 GAGE12HA6NDE8 117 aa7.16□□□□□ -1.26
LSM5-208ENST00000450169 HELTA6NFD8 242 aa7.16□□□□□ -1.26
LSM5-208ENST00000450169 LRRC30A6NM36 301 aa7.16□□□□□ -1.26
LSM5-208ENST00000450169 EIF4EBP3O60516 100 aaPredicted RBP7.16□□□□□ -1.26
LSM5-208ENST00000450169 HBZP02008 142 aa7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms